Lag0000780 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000780
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 16237402 .. 16239862 (-)
RNA-Seq Expression	Lag0000780
Synteny	Lag0000780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGGTGAATTCAAAGCCTCCACACCCTCCATTTGAATTTTTTTTTTTTATAGAGTCAATTTCTTGATCTCTGTGTCCATCATTTTATTTCGTTCCACACAAGTGAATAATAGTTTTTAAAATATAATTTGAAATATATGAACCTCTTAACGACGATATGTTCAATATATATATATATTTTTTTTTTGGAAAAATACACTTTTGGTCACTAAGGTTTGGGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACAATTTAGTCCCTGAAGTTTGATTTTAGTTTCATTTTGGTCCCTCCATCCAATCTTCCGTTAATAATTAACGGATTGCAGACGTGGCAAATTTTTTTATTAATTTTTTTTTTAATTTTTTTAAAATATAAATATAATAAAATAATAACAATATTATTACTTTACATATTTTTTTTATTTATTTCCCCTCTCTCCCTTCTTCTTCACCTAACTCATCCCTCTTCTTCTTCGCCTAACTCCGACAGGTGCTTCTTCTTCAACACCGGTCGCCGATGTGTTTTTTTTTTCCTGTTTTCCTTTCTTTCCTCTCTTTTCTTCTCCTTTTATCTCCATTTTCTTTTTTTCCTCTTATTCTTCGGCAAAGCAACGCACAGATCTGGGCGAAGCAGTGCACGAATCCCTCCCTCTTGCTCGTGTTGGTCGCCGGCAACAAGAAACCCATAAGAAAAATCGTGACGACGAAGCGAAACCCACAAGAAAAATTGTCGGGAACCTCGTTCTAGACGAGACCCGCTGTCGTCCGACGAGATCTGAGTCTCCACGACGTCCGATGCACTTCCCCAACTCAAATCTTGAAGTTTCTAATTTCTGGCAAGACACTTCGTCCCGACGAGATCCGCGAACAAAGTCGAACTACCCACGAACCGGCGAGCACTGCAAACAAATTAGCCAACCGCAAGCCACGATGAGGTTCAGATCTGAACGCAGCCAACGTGTTCTGGTCATTGTCCGAAAAGGAGAGGAAAAATACATAGAGATCGGGTGAGAGGGGAAAAATTGTAGCAGCCAGTTTTTTTTTGAAAAAAAAAAGAGAGGAAGGGAATGGGCTAATGCCAGGTCAAGACGGAAAAGGAAAAAAGGGGGGGAAACTTTCCCCCCAAAATCGGTCAACTGACCGTATTTAAAAAAAAATCTCTGAAGCTTCTCTCTCTCTCTCTCACCCGATACCCTCTCTCCCTCTCTCGGCAATCTCCCTCTCTCTCATACTCTCCCTCCACCCGACGCACGCCGCCACCTCCACTGACACTCGACGCCACCGCACGCCGCAAGCCGTCGCCGTCGGTAAACGTCTCTCATCTCTCTCTCTCTCCCAGTTTTTTCTCTCTCGTCTCTTTCTCCCTCGATCTCACTCTCTCTCACGCCCATCCCCTCCCTTCTCTGTCTCATGTTGTAGCAGCGTCGGTGCGCGCGTTTAGCATTGTTTCCCGGTAGTAACACTGTAGGCACAGACAGCAGCGAGGAGGGACCGTTTTTTTGTATTTTCGGGTGTTTTAGGTGAGTTCTCGCATTGGGTAAGTTGGTTTGAGGCTTATGTAGGTTAGTTCTTGCATTTAAACGATTACCCATTCACTTCTTCTCCTGTTCAGCAAGTGTACCCATTCAATTACGGCGATTCAAGCAGTGGGTCTTCGCGTTTCAGCGTGTTTGAGCAATTTCGGCTTTGGGTAAGTGAACTAAGTTAAGTTTTGAATGATTTAATTGGGTTAAAGGAGTACCCATTGATTTTGGCATGTGGTTGCAAGGTTCTCTTAGCTTTTGGGGATTTAATCGTCAATTTGGAGCGTTATTGGATCATTGGACACCAAGCTAAAGGTTGAGTTTGGGTAAGTTTTTGGAAGTTGAACCTTCTCTAAATTAATGGGTTTCTAGTTGAATGCTTGGATTAGAGTCCCTATTTGATTGAGAGTTTCGTTCCTTGTTGTAGCTTGCTTAAGAGCCTTGGAGTTAAGAAATTTCTTGAAGGTTGATCCAATATCTTCTTCACTAAGGTAAGTAGCCCTTTGGAATAAAACTTTGTGCTTTAAAACTCATTAAAGTTGAGTGTGACTTATAATAGCATGAGTTGGATTCAATCCTTAAGTTGCCCTTGGAATTTAAGTAGCTAGTTGGATTCAAATTCCATGTTTTAAATGCATTGTATGGTAGCTGAACATGGTAGGTAATTCGCTGCGTTAGCAAGAAATGTTTATGCATTAAAATAATTGTTTGCTCCAAGCCTGAATTGGTATTAAAAATTTGGATTGAGATTGAGATGTTATGTATATGGTTGTTGTGTACTTGTGTTGTATGATGGGTGAAAGTGCTGGACTGTTTTATATTATAAGTTGACTGGTATTGTCTGTGGACAACGGGGAGTTTGTGTTGTATCTCTGTTTAGGAGTGTTGCTGTCGCCTTCATTCTTGTTCTTGAGATTGTTTGA

mRNA sequence

ATGCAACGCACAGATCTGGGCGAAGCAGTGCACGAATCCCTCCCTCTTGCTCGTGTTGGTCGCCGGCAACAAGAAACCCATAAGAAAAATCGTGACGACGAAGCGAAACCCACAAGAAAAATTGTCGGGAACCTCGTTCTAGACGAGACCCGCTGTCGTCCGACGAGATCTGAGTCTCCACGACGTCCGATGCACTTCCCCAACTCAAATCTTGAAGTTTCTAATTTCTGGCAAGACACTTCGTCCCGACGAGATCCGCGAACAAAGTCGAACTACCCACGAACCGGCGAGCACTGCAAACAAATTAGCCAACCGCAAGCCACGATGAGGTTCAGATCTGAACGCAGCCAACGTGTTCTGGCACAGACAGCAGCGAGGAGGGACCGTTTTTTTGTATTTTCGGGTGTTTTAGGTGAGTTCTCGCATTGGCAAGTGTACCCATTCAATTACGGCGATTCAAGCAGTGGGTCTTCGCGTTTCAGCGTGTTTGAGCAATTTCGGCTTTGGGTTCTCTTAGCTTTTGGGGATTTAATCGTCAATTTGGAGCGTTATTGGATCATTGGACACCAAGCTAAAGCTTGCTTAAGAGCCTTGGAGTTAAGAAATTTCTTGAAGGTTGATCCAATATCTTCTTCACTAAGGAGTGTTGCTGTCGCCTTCATTCTTGTTCTTGAGATTGTTTGA

Coding sequence (CDS)

ATGCAACGCACAGATCTGGGCGAAGCAGTGCACGAATCCCTCCCTCTTGCTCGTGTTGGTCGCCGGCAACAAGAAACCCATAAGAAAAATCGTGACGACGAAGCGAAACCCACAAGAAAAATTGTCGGGAACCTCGTTCTAGACGAGACCCGCTGTCGTCCGACGAGATCTGAGTCTCCACGACGTCCGATGCACTTCCCCAACTCAAATCTTGAAGTTTCTAATTTCTGGCAAGACACTTCGTCCCGACGAGATCCGCGAACAAAGTCGAACTACCCACGAACCGGCGAGCACTGCAAACAAATTAGCCAACCGCAAGCCACGATGAGGTTCAGATCTGAACGCAGCCAACGTGTTCTGGCACAGACAGCAGCGAGGAGGGACCGTTTTTTTGTATTTTCGGGTGTTTTAGGTGAGTTCTCGCATTGGCAAGTGTACCCATTCAATTACGGCGATTCAAGCAGTGGGTCTTCGCGTTTCAGCGTGTTTGAGCAATTTCGGCTTTGGGTTCTCTTAGCTTTTGGGGATTTAATCGTCAATTTGGAGCGTTATTGGATCATTGGACACCAAGCTAAAGCTTGCTTAAGAGCCTTGGAGTTAAGAAATTTCTTGAAGGTTGATCCAATATCTTCTTCACTAAGGAGTGTTGCTGTCGCCTTCATTCTTGTTCTTGAGATTGTTTGA

Protein sequence

MQRTDLGEAVHESLPLARVGRRQQETHKKNRDDEAKPTRKIVGNLVLDETRCRPTRSESPRRPMHFPNSNLEVSNFWQDTSSRRDPRTKSNYPRTGEHCKQISQPQATMRFRSERSQRVLAQTAARRDRFFVFSGVLGEFSHWQVYPFNYGDSSSGSSRFSVFEQFRLWVLLAFGDLIVNLERYWIIGHQAKACLRALELRNFLKVDPISSSLRSVAVAFILVLEIV

Homology

The following BLAST results are available for this feature:

BLAST of Lag0000780 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0000780 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0000780 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0000780 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000780.1	Lag0000780.1	mRNA