Lag0000704 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAAGTCATGCATCGCTACCACATCACCGGACGGGACGATTACAAAAAGTAACTTCCTCTTTCTTCTAATTCCTTCTGTTTCTACTACTTTCTTTCTTTTATCGCTTTGAAATTGATTTGATTTGATGTAGGTATTCGACTCTCTGCCGTGGGGTTCAGAAGCTGGTTTCCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGACTGAGAAGCTCCTCGAAAAGCTGTGAGTTTTCTTGAGTATAACTCCACACAAAGAAATTTTCCTACATTACATTAAGCAAGCTTCCGTTTCATTTTATTGTCTAACTGTCTTATTTTCTTTTTAATTTCAAAGATTCGATGAAATCTTATACTGCTGGTTCAAACTATTGAGTTCTGTGTTTCCATGGATCTTTTGATTTTTTACAGCAATATATGTGTTGTCAAGAAATTTATGTCTTGGCACATTGTAAGACTAGACATCTTTGATTAATGCTTAACATCTCTTCTCTCTTTTCAATGCTTATTCAAAGGAAACTGATGGTATGTGTTTTTGTCTAATTTGAAATGAGAAGCTTATTTTAACCTAGCATAGAGGCTCTCATGGTACAAGAGCCAGTTATGAGATTGAGATGCTTCGTTTGAGATCAAAAGTATATATGCAATATAAAAAGATGTTAAAAGCAGTAAACTAAATGTGAGTCAATTACACATTTTTGTTCCATAGTGTAACTTGACTGGCAAAATCTAGTTGGTTTGAAGTATCTATTTTTGACTAGGAGGGTGCTAGTTAGTTTAACGTACCTATCTTGGACTTGGATTTTCCAGCTCCAATTTCCTCGGTAGAAAAGGTCCACACTTTTGGCATCTCTGCTAAATTCATGGGAAAGAGCTTGAACCAATTGCAGGTCGTGTGTCTCTTATTGCCCAGTATTCTCAAGATCTCTAGAATAAAAGGTCTAGTTTATTAATACTTTTACACAAGGACTTAGTTGTCCATTTTACTCCTTTACCTTCCATTTTCATGGAACTGCCAACGTCCCCCATGAATTTATCTATACTATATTTTTCTAATGCTTAAGCTATTTTAAATTTAATTACTTTTGGCCCCAAGATTGAATCTTTTTAAACTATCCAAGATTTTGAGTCAACAATGGCACAGTATATCAACATTTGTCATGAGTTGGTGTAAATGTTCTTTAGTTTTATATAATGCTCTTTGTTAGTGTAAAGGTTCATCACCTTTCAAAGATTGTAGCCTTTCTACTTTATTTATACTTGGAGATCATCTTTGAAATGCACCAAAGGTGGTCATTTCATTTATCAAAAATATCTCAGTTTCATTCTAGAAAAACATTCCTCATGAGTTGCTCAAGCTTTAAGCATGAAAGGTCTAAAAGGTAGCTATTAACTATGATGGGAAAAGTGCTTTTTTGGAAGCTGGGACCATCGTGTCCAATGAAAGTGATGTCTTGGAATGTTAGAGGCGTTGGTGGGGATAAGAGGAGACTAGTGAAGGAGCTTTTGATTTTGTAATGTCCTGATATTGCTATCCTTCTAGAAACCATTCATAAGAACTACTATCGTCAGAATTTTGTTCGGAGTCTTTGGGCTTGAGTTAGTTGGGGGAAGGGGTGGTGAAATCTTTGGATGCTGTGAGAAGAGCTTTATCTTTATTGGTGACCTTTGAGTTCTCCAGGGTGGGGGTGGGTTGGGTCTTGGGTTTTGTACGACCTCCTTATTTCGAGATTTAGGAAGGCTTTGCTGGAGGAGTTATGCAATCTCTTTGGGCTTTATAGGACTAGTGGGACTTGGCTAGGGACTTAATGTGACTAGGTTCCCTTCCGAAAAATCTAATGGTGGTAGAATTTCTAGATCCATGAGGAGTTTTAACAAATAACAGCTTTAAGGATAGTAATGTTTTGGATCCCCTTTGGTGGATGGTAGGTTTACTTGGTCTAGCCTTAAAGAAAGGGAGGATTGTCATCGGTTGGATAGATTTTTGTTTTCTAAGGACTGGTTGGACTTGTTGCTCAATGCTAGAAAGCCTTGGGATCTAACCTTTGATTATTTGCCTATTTTTCTGTATTTGGGACACATTAAGTGGGGTCCTCGTCTTCTTTATGCAAAGTCCTAGTTCCGGTGCCCGAAAAGCTAGAGAAAATTATGAGGGAATTTTAAAGGGAAGGTGTTGATGAGGAGGGACCTTTGAGTTTGGACCCTTGATCCTTTAGGGGGCTTTTCTTGCCGCTCTTTTTTTTCATCTCTTGTATGTCCCTTTGTCTGTCCTAGGAAGCACGAACACGTCATATTTGACGAAGAATCTGTGTCGGACATGCAATTTTGCATGTCCTATTTTTTTATTTTTTTATTTTTTAAAAAAACGGACACGCTTGGACACGTTGGGACATGGTATTGGACACGTAGGCCCAAATCTACAGACCCAAAAGTTATGTTTAACTAAAAAAGTTAAAAAAAGAAAACCCTAATACGCACCCCTCATCGCACCAGCCGCCGCCGTCGTCTGTTTCAAAAGGCGCCGCTGGAAGTTACCTAAAAAACTCGAAGTCGCAGCCCACTAGGTTTTCTTCGTACGGTAGGTTTAACGTTTAAGTTTTTCTTTTCGGTTATTTTGGGTTTGGTGTGTAAGGGGAGAGATTACCAGCCCTCTCAAGTAATTTTTGCTGGATGCTCTGCTTATGTTCTTGTTTTCTGTTCTTTACATTTCCAATTTGCTTATTCGTGTATTGTTGTTGAATCTATCAATATCAAGCACTAGTAAAGGATTACCTTATAGGTATTTGACTTGAGAGAAATAATAGAATTTATAGGCATGTGAGAGGTCTTGGAAAGAGGTTTGAGATATTGTTAGATTTAATAGCTCTTTGTGGCCTTGGTCTCTATTTGCTAGGTCTTATTAGGTTGGATTGAAGTCATTTTCTGGTTAGTTAGTGTTTGTTTGAGCTTCTTTCGTTGAGTTGTTATTTTGTTTCCGCTTGTATATTGTTTTCATTTTGCTCAGTTTCTTTGTATTTTTTACACTATATGTTTTTCTTCAAGGCTAAAGCGATTTTAAACTTGTTGAAATTTTATTTTCCAAGAACCCAACCATTTTCTTCAAACTTATCTGAGTCTTGAATGAATGATGACATGTTAATCTAACTAACCAGAGGTGAATTAATACAAGCAGATTATATGTAGTAAACCATTTCAAGTATTATTTGCAACTTCATCTGTATTATTTTGCTCACTCTTTCCCCATGCTTCTCTCTTGAAAAACTATGTGACAGGTACAATATTGGTGTGATACCGACTCGACAGAGCTTGAATTTATGTGACCGCTTGTCCGTGTCATCTTTTTGCAGGTAAAACGAACATCCTGCGGAAAAGAATTAATTTCTTTCTACTTTGCAATGTTTACATATTTTCTATTGCTAATATAACCAATACTTCAACTCTTGCCGTTTTTGCTTTTGCTGCATATCGTTTTTACTTCAAGCCTATTTTCCCCTCTCTTTGCAGACGGAGGCTATCGACGGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCCGTTACATACATCGAGCAAGGGCACATTAGAGTTGGTCCAGAGACTGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACATGGGTAGATTCATCAAAGATAAAGAGAAAAGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAAGTCATGCATCGCTACCACATCACCGGACGGGACGATTACAAAAAGTATTCGACTCTCTGCCGTGGGGTTCAGAAGCTGGTTTCCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGACTGAGAAGCTCCTCGAAAAGCTGTACAATATTGGTGTGATACCGACTCGACAGAGCTTGAATTTATGTGACCGCTTGTCCGTGTCATCTTTTTGCAGACGGAGGCTATCGACGGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCCGTTACATACATCGAGCAAGGGCACATTAGAGTTGGTCCAGAGACTGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACATGGGTAGATTCATCAAAGATAAAGAGAAAAGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAAGTCATGCATCGCTACCACATCACCGGACGGGACGATTACAAAAAGTATTCGACTCTCTGCCGTGGGGTTCAGAAGCTGGTTTCCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGACTGAGAAGCTCCTCGAAAAGCTGTACAATATTGGTGTGATACCGACTCGACAGAGCTTGAATTTATGTGACCGCTTGTCCGTGTCATCTTTTTGCAGACGGAGGCTATCGACGGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCCGTTACATACATCGAGCAAGGGCACATTAGAGTTGGTCCAGAGACTGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACATGGGTAGATTCATCAAAGATAAAGAGAAAAGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC Homology
BLAST of Lag0000704 vs. NCBI nr
Match: KAA0041194.1 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa] >KAA0046137.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa] >TYK02423.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96 Identity = 178/183 (97.27%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Lag0000704 vs. NCBI nr
Match: XP_004153543.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus] >KGN53772.1 hypothetical protein Csa_015405 [Cucumis sativus]) HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96 Identity = 177/183 (96.72%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Lag0000704 vs. NCBI nr
Match: XP_022955364.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata] >XP_023526276.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita pepo subsp. pepo] >KAG6581715.1 U3 small nucleolar ribonucleoprotein IMP3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018192.1 U3 small nucleolar ribonucleoprotein IMP3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96 Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Lag0000704 vs. NCBI nr
Match: XP_038880355.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95 Identity = 176/183 (96.17%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Lag0000704 vs. NCBI nr
Match: TYK23826.1 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95 Identity = 177/183 (96.72%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Lag0000704 vs. ExPASy Swiss-Prot
Match: Q921Y2 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Mus musculus OX=10090 GN=Imp3 PE=2 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 6.7e-56 Identity = 103/180 (57.22%), Postives = 143/180 (79.44%), Query Frame = 0
BLAST of Lag0000704 vs. ExPASy Swiss-Prot
Match: Q3T0M3 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Bos taurus OX=9913 GN=IMP3 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55 Identity = 103/180 (57.22%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Lag0000704 vs. ExPASy Swiss-Prot
Match: Q9NV31 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens OX=9606 GN=IMP3 PE=1 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55 Identity = 103/180 (57.22%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Lag0000704 vs. ExPASy Swiss-Prot
Match: P32899 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP3 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.5e-52 Identity = 95/180 (52.78%), Postives = 140/180 (77.78%), Query Frame = 0
BLAST of Lag0000704 vs. ExPASy Swiss-Prot
Match: O13835 (U3 small nucleolar ribonucleoprotein protein imp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp3 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 5.2e-48 Identity = 89/183 (48.63%), Postives = 136/183 (74.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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