Lag0000607 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTTACAATTCCAAGACTATTTGATAGAACATGGAATTACGTCTCAACTCTCAGCCCCTGCTACACCACAACAAAATGGTGTATCCGAGAGGAGAAACCGAACTCTGTTAGACATGGTTCGATCAATGATGAGCTATGCTCAAGTGCCTGATTCGTTATGGGGATATGCAGTTGAGACTGTCGTATACATTTTGAACATGGTTCCCTCTAAAAGTGTTTCTAAAACACCTTATGAGCTATGGAGAGGGCGTAAAGGTAGTTTACGTCACTTCAGAGTTTGGGGATGCCCGACACACGTGTTGGTGCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAAGAAGTTGGAACGACGTTCAAAACTATGTCTATTTGTAGGATATCCTAAAGAAACGAAAGGTGGTCTATTTTAAGATGCAAGTTTTGGGGAATCCCTACAGAAAAAGAAAAGAATCAGGCGCCCTAGTTTCTTTGTTTTGCATGATAGCTAGATTCCAACCTGTTAGGACTCTTAGCTAGTGTAGGGGGAAGACAAATGGAAAAAAACCGTAAAACTAATCTAGGTTAGTAAAAGAACCACTAGATAAGTTTTGAGCATGCTATTCGTTAATTTTAAGTTTCATTTTTAAAATTTCTTCATGAGTATGTTGTGCTTGCTTAGTCCACTTGCACATTTTCCGTATTTCCCTAAAGAAATTCTAAAATCATTGAGGCTAGAGCGATTCTTTTCATGCATCTTTGGAATTAATTTTGCTCGTGACTAGCAAAAGCATAAGTTTAGGGGTGTGATAGCATGCATAAATGTTGTTATTTTGTCCTTGAATTTAATAGCTTTTGATGTTCTTTATTGTGTTTTTATTATATAAATTCATTTAATTGATTAATTTTGGTCCCTAGGAGTTTTTGTGGAAATTTGGAGAAAAAGAGGATAAAAGAAGCTTATAGGTCTAATTTATTATGCACTTAGAATCTCCCAATTTGCTTATCTTAGTTGAATTCCAAGCGAAAAATGCTTTAAAATGAGTATAATATGTCTATAGATCCTCATCGGAGCTTTGGAAGCAATTTGGAGCCTAAACGAGCAAAACCGAGTGGAAAATGACCATTCTGCCCTTGGAGCTTCATCACTGTCGAGACCCTCCCTTATCAGCGTCGAGACGCCAACCATTTAAGGAAAGAATTTCAGAGATCAAGCTGGAGAGCAGCGTCTCGACGCTGCAACCTTAGCGACTCGACGTTCTATTTGTAGGAATCATGTATTGGAGCTAAATTGAGAAAATGGGATTGATCGAGTGTTCGGGACGTGAAAAGTGGCCAAAGAAACGAAGATGAATCGAAGTTCGAAGCTTTTTTATGAGTTCAATCCGAGAGCGAGCGTCAAGACGCTAGTTTTTGGACCTCTCAACGCTGGAATTTTCCTTGTTTGATTCAGGCGGCAAAAGAGCACAGCGTCAAGATGTTGTGTGTTGCCTTCTAGAGTGGGGTCAAAATATAGATAGAATTCACTTCAAAGTAGCTCTAGAATACTATGCAAGCATACACAATCCGCAACAAGTGATAAGTAAATTATCGTATCCACGGGGCTAA ATGGACTTACAATTCCAAGACTATTTGATAGAACATGGAATTACGTCTCAACTCTCAGCCCCTGCTACACCACAACAAAATGGTGTATCCGAGAGGAGAAACCGAACTCTGTTAGACATGGTTCGATCAATGATGAGCTATGCTCAAGTGCCTGATTCGTTATGGGGATATGCAGTTGAGACTGTCGTATACATTTTGAACATGGTTCCCTCTAAAAGTGTTTCTAAAACACCTTATGAGCTATGGAGAGGGCGTAAAGGCGGCAAAAGAGCACAGCGTCAAGATGTTGTGTGTTGCCTTCTAGAGTGGGGTCAAAATATAGATAGAATTCACTTCAAAGTAGCTCTAGAATACTATGCAAGCATACACAATCCGCAACAAGTGATAAGTAAATTATCGTATCCACGGGGCTAA ATGGACTTACAATTCCAAGACTATTTGATAGAACATGGAATTACGTCTCAACTCTCAGCCCCTGCTACACCACAACAAAATGGTGTATCCGAGAGGAGAAACCGAACTCTGTTAGACATGGTTCGATCAATGATGAGCTATGCTCAAGTGCCTGATTCGTTATGGGGATATGCAGTTGAGACTGTCGTATACATTTTGAACATGGTTCCCTCTAAAAGTGTTTCTAAAACACCTTATGAGCTATGGAGAGGGCGTAAAGGCGGCAAAAGAGCACAGCGTCAAGATGTTGTGTGTTGCCTTCTAGAGTGGGGTCAAAATATAGATAGAATTCACTTCAAAGTAGCTCTAGAATACTATGCAAGCATACACAATCCGCAACAAGTGATAAGTAAATTATCGTATCCACGGGGCTAA MDLQFQDYLIEHGITSQLSAPATPQQNGVSERRNRTLLDMVRSMMSYAQVPDSLWGYAVETVVYILNMVPSKSVSKTPYELWRGRKGGKRAQRQDVVCCLLEWGQNIDRIHFKVALEYYASIHNPQQVISKLSYPRG Homology
BLAST of Lag0000607 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34 Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Lag0000607 vs. NCBI nr
Match: TYK04171.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34 Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Lag0000607 vs. NCBI nr
Match: KAA0063836.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK28216.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34 Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Lag0000607 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34 Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Lag0000607 vs. NCBI nr
Match: TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34 Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Lag0000607 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 81.6 bits (200), Expect = 7.4e-15 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Lag0000607 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14 Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Lag0000607 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.4e-11 Identity = 28/66 (42.42%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Lag0000607 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.6e-09 Identity = 24/65 (36.92%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Lag0000607 vs. ExPASy Swiss-Prot
Match: Q07163 (Transposon TyH3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae OX=4932 GN=TY1B PE=1 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 3.4e-04 Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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