Lag0000323 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAAACTTCCTATCACAGTTGTTTGGCTCTTTGCGGTGGCAGTAATGGTGGCAGTTCTCACCGGAGCTGGTCTGGCGGGTGCACAAACAACTTGTGACACTGCGCAGTTGAGTCCATGTTTCAATGCTTACGTATTGGGTCAAAAACCAAGCACGAAGTGTTGCAATAAGTTGAAGGAGCAACAACCATGCTACTGTACGTACCTCAAAAATCCTAGTTTGCAGCCTTTTATAGATTCCGATCGCGCAAGAGCGATTGCTGAAGCTTGTGACATCACCTTTCCATCTGAGAAGGATTGTCCGTAG ATGAATAAACTTCCTATCACAGTTGTTTGGCTCTTTGCGGTGGCAGTAATGGTGGCAGTTCTCACCGGAGCTGGTCTGGCGGGTGCACAAACAACTTGTGACACTGCGCAGTTGAGTCCATGTTTCAATGCTTACGTATTGGGTCAAAAACCAAGCACGAAGTGTTGCAATAAGTTGAAGGAGCAACAACCATGCTACTGTACGTACCTCAAAAATCCTAGTTTGCAGCCTTTTATAGATTCCGATCGCGCAAGAGCGATTGCTGAAGCTTGTGACATCACCTTTCCATCTGAGAAGGATTGTCCGTAG ATGAATAAACTTCCTATCACAGTTGTTTGGCTCTTTGCGGTGGCAGTAATGGTGGCAGTTCTCACCGGAGCTGGTCTGGCGGGTGCACAAACAACTTGTGACACTGCGCAGTTGAGTCCATGTTTCAATGCTTACGTATTGGGTCAAAAACCAAGCACGAAGTGTTGCAATAAGTTGAAGGAGCAACAACCATGCTACTGTACGTACCTCAAAAATCCTAGTTTGCAGCCTTTTATAGATTCCGATCGCGCAAGAGCGATTGCTGAAGCTTGTGACATCACCTTTCCATCTGAGAAGGATTGTCCGTAG MNKLPITVVWLFAVAVMVAVLTGAGLAGAQTTCDTAQLSPCFNAYVLGQKPSTKCCNKLKEQQPCYCTYLKNPSLQPFIDSDRARAIAEACDITFPSEKDCP Homology
BLAST of Lag0000323 vs. NCBI nr
Match: XP_008444079.1 (PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA0064163.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa] >TYK02866.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 54/103 (52.43%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of Lag0000323 vs. NCBI nr
Match: KAG7026200.1 (hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108.6 bits (270), Expect = 3.2e-20 Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of Lag0000323 vs. NCBI nr
Match: KAG6581747.1 (hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.1 bits (266), Expect = 9.3e-20 Identity = 57/103 (55.34%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of Lag0000323 vs. NCBI nr
Match: KAE8648021.1 (hypothetical protein Csa_005848 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of Lag0000323 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17 Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of Lag0000323 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.6e-14 Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of Lag0000323 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.8e-13 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Lag0000323 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of Lag0000323 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.3e-11 Identity = 33/81 (40.74%), Postives = 44/81 (54.32%), Query Frame = 0
BLAST of Lag0000323 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 4.1e-10 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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