Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAGTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
mRNA sequence
ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
Coding sequence (CDS)
ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATGATTTCTCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
Protein sequence
MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGGKALQWDSNSVPFEILRRVALWRAHSIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Homology
BLAST of IVF0026454 vs. ExPASy TrEMBL
Match:
A0A072TVZ8 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0002s0250 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56
Identity = 130/203 (64.04%), Postives = 141/203 (69.46%), Query Frame = 0
Query: 1 MGCQERRGVRVGEGQSLILKTSIL--KTKEAGGKGGK------------------ALQWD 60
MGCQ+RRGVRVGEGQSL+LKTSIL K KE+GGK G+ + +
Sbjct: 11 MGCQKRRGVRVGEGQSLVLKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQ 70
Query: 61 SNSVPFEILRRVALWRAH--------------------SIYDFSFMDVDKILPFSSTLGW 120
++ FEILRRVALWRA Y SFMDVDKILP SSTLGW
Sbjct: 71 LSTFCFEILRRVALWRAQYDESCKLCSGGSYCLSLASMLWYALSFMDVDKILPSSSTLGW 130
Query: 121 HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWA 164
L+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGV NK RS DSRIGQPF+LLLN A
Sbjct: 131 PRLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKHRSEDSRIGQPFELLLNSRA 190
BLAST of IVF0026454 vs. ExPASy TrEMBL
Match:
A0A452YTU0 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.5e-52
Identity = 108/152 (71.05%), Postives = 119/152 (78.29%), Query Frame = 0
Query: 1 MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGGK------------------ALQWDSN 60
MGCQ+ RGVRVGEGQSL+LKTSILK KE+GGK G+ + + +
Sbjct: 1 MGCQKGRGVRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLS 60
Query: 61 SVPFEILRRVALWRAHSIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHP 120
+ FEILRRVALWRAHSIYDF+FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHP
Sbjct: 61 TFCFEILRRVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHP 120
Query: 121 ETRKGVVSDEMLRGVANKRRSGDSRIGQPFKL 135
ETRKGV SDEMLRGV NK RSGDS+IGQPFKL
Sbjct: 121 ETRKGVASDEMLRGVENKHRSGDSQIGQPFKL 152
BLAST of IVF0026454 vs. ExPASy TrEMBL
Match:
A0A2N9HUL9 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43295 PE=3 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 6.0e-51
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 118
SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV
Sbjct: 48 SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 107
Query: 119 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 164
NKRRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 108 NKRRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP 152
BLAST of IVF0026454 vs. ExPASy TrEMBL
Match:
A0A2P2JY74 (Uncharacterized protein ycf68 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG 118
SIYD SFMDVDKILPFSSTLGWHS LKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRG
Sbjct: 48 SIYDLSFMDVDKILPFSSTLGWHSLNLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRG 107
Query: 119 VANKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 164
V NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRKRKQKRFP
Sbjct: 108 VENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSNQRKRKQKRFP 154
BLAST of IVF0026454 vs. ExPASy TrEMBL
Match:
A0A5K1HX37 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30893 PE=4 SV=1)
HSP 1 Score: 203.0 bits (515), Expect = 9.6e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 118
SIYD SFMDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGV
Sbjct: 1 SIYDLSFMDVDKILPFSSTLGWHSLNVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVE 60
Query: 119 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 164
NK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 61 NKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP 105
BLAST of IVF0026454 vs. NCBI nr
Match:
KEH17695.1 (hypothetical protein MTR_0002s0250 [Medicago truncatula])
HSP 1 Score: 226 bits (577), Expect = 2.27e-72
Identity = 131/203 (64.53%), Postives = 143/203 (70.44%), Query Frame = 0
Query: 1 MGCQERRGVRVGEGQSLILKTSILK--TKEAGGKGGKA------------------LQWD 60
MGCQ+RRGVRVGEGQSL+LKTSILK KE+GGK G+ + +
Sbjct: 11 MGCQKRRGVRVGEGQSLVLKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQ 70
Query: 61 SNSVPFEILRRVALWRAH---------------SI-----YDFSFMDVDKILPFSSTLGW 120
++ FEILRRVALWRA S+ Y SFMDVDKILP SSTLGW
Sbjct: 71 LSTFCFEILRRVALWRAQYDESCKLCSGGSYCLSLASMLWYALSFMDVDKILPSSSTLGW 130
Query: 121 HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGDSRIGQPFKLLLNPWA 163
L+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGV NK RS DSRIGQPF+LLLN A
Sbjct: 131 PRLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKHRSEDSRIGQPFELLLNSRA 190
BLAST of IVF0026454 vs. NCBI nr
Match:
KAG5222336.1 (Vacuolar protein sorting-associated protein [Salix suchowensis])
HSP 1 Score: 207 bits (526), Expect = 2.64e-64
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 118
SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV
Sbjct: 132 SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 191
Query: 119 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
NKRRSGDSRIGQPFKLL NPWAGKRQPGELKHLS+QRKRKQKRFP
Sbjct: 192 NKRRSGDSRIGQPFKLLPNPWAGKRQPGELKHLSNQRKRKQKRFP 236
BLAST of IVF0026454 vs. NCBI nr
Match:
VVW91297.1 (unnamed protein product, partial [Nymphaea colorata])
HSP 1 Score: 202 bits (513), Expect = 3.65e-64
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 118
SIYD SFMDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGV
Sbjct: 1 SIYDLSFMDVDKILPFSSTLGWHSLNVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVE 60
Query: 119 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
NK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 61 NKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP 105
BLAST of IVF0026454 vs. NCBI nr
Match:
KAF7117209.1 (hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii])
HSP 1 Score: 204 bits (520), Expect = 3.71e-64
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0
Query: 59 SIYDFSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVA 118
SIYD SFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV
Sbjct: 77 SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVE 136
Query: 119 NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
NK RSGDSRIGQPF+LLLNPWA KRQPGELKHLSSQRKRKQKRFP
Sbjct: 137 NKHRSGDSRIGQPFELLLNPWADKRQPGELKHLSSQRKRKQKRFP 181
BLAST of IVF0026454 vs. NCBI nr
Match:
KAB8477469.1 (hypothetical protein FH972_025335 [Carpinus fangiana])
HSP 1 Score: 199 bits (507), Expect = 2.40e-63
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0
Query: 66 MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVANKRRSGD 125
MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGV NKRRSGD
Sbjct: 1 MDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGD 60
Query: 126 SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 163
SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Sbjct: 61 SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A072TVZ8 | 1.6e-56 | 64.04 | Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0002s0250 PE=4 SV=... | [more] |
A0A452YTU0 | 2.5e-52 | 71.05 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A2N9HUL9 | 6.0e-51 | 96.19 | Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43295 PE=3... | [more] |
A0A2P2JY74 | 1.5e-49 | 94.39 | Uncharacterized protein ycf68 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | [more] |
A0A5K1HX37 | 9.6e-49 | 92.38 | Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30... | [more] |
Match Name | E-value | Identity | Description | |
KEH17695.1 | 2.27e-72 | 64.53 | hypothetical protein MTR_0002s0250 [Medicago truncatula] | [more] |
KAG5222336.1 | 2.64e-64 | 95.24 | Vacuolar protein sorting-associated protein [Salix suchowensis] | [more] |
VVW91297.1 | 3.65e-64 | 92.38 | unnamed protein product, partial [Nymphaea colorata] | [more] |
KAF7117209.1 | 3.71e-64 | 94.29 | hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii] | [more] |
KAB8477469.1 | 2.40e-63 | 97.96 | hypothetical protein FH972_025335 [Carpinus fangiana] | [more] |
Match Name | E-value | Identity | Description | |