IVF0025712 (gene) Melon (IVF77) v1

Overview
NameIVF0025712
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEnvelope-like protein
Locationchr12: 3420527 .. 3421265 (+)
RNA-Seq ExpressionIVF0025712
SyntenyIVF0025712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAGCGAATGTTTCACCAGTCTTCATGAGCCTGTGCCAAAAAAAGTTGTTTCTCGTGATCTTGCGACGATTGCTGAACATGCACCTGGTGCTCCTAAGACTCATATGTTTGATATGGATTCCGATGATCTTAATGATGTTCCTTTGGCTCGTTTGTTGAAGAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGTCTGAATAATGGCCTCGCATCTCCATCTGCTGATGAAACCACACACTTGAGGGAGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA

mRNA sequence

ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA

Coding sequence (CDS)

ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA

Protein sequence

MVNTRKGSYAAKSSEDDLEARISSPSMHVRMRGHRFKSTTPRSPYRLSFKKSQKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQNR
Homology
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match: A0A5A7U5S6 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001470 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.4e-51
Identity = 132/242 (54.55%), Postives = 142/242 (58.68%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
           MV TR GS+A K  E+DLEARISS SMH VRMRG RFKST  R PYRLSF+KSQ      
Sbjct: 1   MVKTRNGSFATKPFEEDLEARISSLSMHNVRMRGRRFKSTPQRRPYRLSFEKSQANVLVN 60

Query: 61  -----------------------------------------------KTFVPDVAFERPI 120
                                                          KT VPDVA ERPI
Sbjct: 61  LHELVSEKVVYRDTATIAKYPPGALEAHMSNMDSNDLDDVPLARLLKKTSVPDVAVERPI 120

Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS--------- 170
           DP VSDH QESSST+GV VP PGLQHT T++PG S YSS +RSPAPNTTSS         
Sbjct: 121 DPPVSDHFQESSSTEGVLVPTPGLQHTFTLEPGPSFYSSLVRSPAPNTTSSGLNNDHASQ 180

BLAST of IVF0025712 vs. ExPASy TrEMBL
Match: A0A5D3C2V7 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00920 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.5e-50
Identity = 123/193 (63.73%), Postives = 135/193 (69.95%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQKTFVPD 60
           MVNTRKGSYAAKSSEDDLEARISSPSMH +RMRGH                         
Sbjct: 1   MVNTRKGSYAAKSSEDDLEARISSPSMHNMRMRGH------------------------- 60

Query: 61  VAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS-- 120
           VA ERPID  VSDH+QE+SST+GVFVP PGLQHTST +PG SLYSS ++SP P++TSS  
Sbjct: 61  VAVERPIDAPVSDHAQENSSTEGVFVPTPGLQHTSTFEPGPSLYSSLVQSPTPHSTSSSL 120

Query: 121 -----------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFL 174
                            GTDV+ND DELDP+IP+VNT EIPVDVDVDNTLAAPTESPAF 
Sbjct: 121 KNDPASPPADETAALERGTDVHNDDDELDPVIPKVNTCEIPVDVDVDNTLAAPTESPAFP 168

BLAST of IVF0025712 vs. ExPASy TrEMBL
Match: A0A5A7UZP9 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00990 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 128/238 (53.78%), Postives = 143/238 (60.08%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
           MVNTRKGSYAAKSSEDDLEARISSP MH VR++GHRFKST P+ PYRLS +KSQ      
Sbjct: 1   MVNTRKGSYAAKSSEDDLEARISSPPMHNVRIKGHRFKSTPPQRPYRLSSEKSQANVSTN 60

Query: 61  -----------------------------------------------KTFVPDVAFERPI 120
                                                          KT +PDVA ERPI
Sbjct: 61  LHEPVPKKVVSRDRATIAEHDPGAPATHMFDMDSDDLDDVPLARLLKKTSIPDVAVERPI 120

Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS--------- 164
           DP VSDHS+E+SS +GVFVP P LQH STV+PGSSLYSSP++S  PNTTSS         
Sbjct: 121 DPHVSDHSKENSSPEGVFVPTPNLQHISTVEPGSSLYSSPVQSSTPNTTSSGLNNDTASP 180

BLAST of IVF0025712 vs. ExPASy TrEMBL
Match: A0A5A7T4E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00280 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44
Identity = 102/122 (83.61%), Postives = 103/122 (84.43%), Query Frame = 0

Query: 53  QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
           +KTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKP              
Sbjct: 206 KKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKP-------------- 265

Query: 113 NTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 172
                GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ
Sbjct: 266 -----GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 308

Query: 173 NR 175
           NR
Sbjct: 326 NR 308

BLAST of IVF0025712 vs. ExPASy TrEMBL
Match: A0A5A7UCZ0 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00190 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 84/137 (61.31%), Postives = 95/137 (69.34%), Query Frame = 0

Query: 53  QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
           +KT + +V  ERPIDPLVS+HSQESSST+GVFVP  GLQH STV+ G SLYSS +RSP P
Sbjct: 422 KKTSITNVVVERPIDPLVSNHSQESSSTEGVFVPTSGLQHISTVESGPSLYSSLVRSPTP 481

Query: 113 NTTSS-------------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAP 171
           N TSS                   G DV+ND DELDP+I EVNT +IP DV+VDNT A P
Sbjct: 482 NPTSSSQNNDPTSPPADETVAPEEGIDVHNDDDELDPVILEVNTGDIPFDVNVDNTSATP 541

BLAST of IVF0025712 vs. NCBI nr
Match: TYK04776.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 6.45e-65
Identity = 123/193 (63.73%), Postives = 135/193 (69.95%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQKTFVPD 60
           MVNTRKGSYAAKSSEDDLEARISSPSMH +RMRGH                         
Sbjct: 1   MVNTRKGSYAAKSSEDDLEARISSPSMHNMRMRGH------------------------- 60

Query: 61  VAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS-- 120
           VA ERPID  VSDH+QE+SST+GVFVP PGLQHTST +PG SLYSS ++SP P++TSS  
Sbjct: 61  VAVERPIDAPVSDHAQENSSTEGVFVPTPGLQHTSTFEPGPSLYSSLVQSPTPHSTSSSL 120

Query: 121 -----------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFL 173
                            GTDV+ND DELDP+IP+VNT EIPVDVDVDNTLAAPTESPAF 
Sbjct: 121 KNDPASPPADETAALERGTDVHNDDDELDPVIPKVNTCEIPVDVDVDNTLAAPTESPAFP 168

BLAST of IVF0025712 vs. NCBI nr
Match: KAA0050594.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK07846.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (531), Expect = 8.49e-65
Identity = 132/242 (54.55%), Postives = 142/242 (58.68%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
           MV TR GS+A K  E+DLEARISS SMH VRMRG RFKST  R PYRLSF+KSQ      
Sbjct: 1   MVKTRNGSFATKPFEEDLEARISSLSMHNVRMRGRRFKSTPQRRPYRLSFEKSQANVLVN 60

Query: 61  -----------------------------------------------KTFVPDVAFERPI 120
                                                          KT VPDVA ERPI
Sbjct: 61  LHELVSEKVVYRDTATIAKYPPGALEAHMSNMDSNDLDDVPLARLLKKTSVPDVAVERPI 120

Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSGT------- 169
           DP VSDH QESSST+GV VP PGLQHT T++PG S YSS +RSPAPNTTSSG        
Sbjct: 121 DPPVSDHFQESSSTEGVLVPTPGLQHTFTLEPGPSFYSSLVRSPAPNTTSSGLNNDHASQ 180

BLAST of IVF0025712 vs. NCBI nr
Match: KAA0060580.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK02291.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (514), Expect = 2.83e-62
Identity = 128/238 (53.78%), Postives = 143/238 (60.08%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
           MVNTRKGSYAAKSSEDDLEARISSP MH VR++GHRFKST P+ PYRLS +KSQ      
Sbjct: 1   MVNTRKGSYAAKSSEDDLEARISSPPMHNVRIKGHRFKSTPPQRPYRLSSEKSQANVSTN 60

Query: 61  -----------------------------------------------KTFVPDVAFERPI 120
                                                          KT +PDVA ERPI
Sbjct: 61  LHEPVPKKVVSRDRATIAEHDPGAPATHMFDMDSDDLDDVPLARLLKKTSIPDVAVERPI 120

Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSG-------- 163
           DP VSDHS+E+SS +GVFVP P LQH STV+PGSSLYSSP++S  PNTTSSG        
Sbjct: 121 DPHVSDHSKENSSPEGVFVPTPNLQHISTVEPGSSLYSSPVQSSTPNTTSSGLNNDTASP 180

BLAST of IVF0025712 vs. NCBI nr
Match: KAA0036986.1 (uncharacterized protein E6C27_scaffold86G00670 [Cucumis melo var. makuwa] >TYK21219.1 uncharacterized protein E5676_scaffold359G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 2.36e-53
Identity = 102/122 (83.61%), Postives = 103/122 (84.43%), Query Frame = 0

Query: 53  QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
           +KTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPG             
Sbjct: 206 KKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPG------------- 265

Query: 113 NTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 172
                 TDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ
Sbjct: 266 ------TDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 308

Query: 173 NR 174
           NR
Sbjct: 326 NR 308

BLAST of IVF0025712 vs. NCBI nr
Match: TYK11261.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (353), Expect = 1.49e-37
Identity = 107/247 (43.32%), Postives = 126/247 (51.01%), Query Frame = 0

Query: 1   MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
           MVNTRKG+YAAKSS+D LE +I   SMH V + G  FKST P+ PYRL  +KSQ      
Sbjct: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60

Query: 61  -----------------------------------------------KTFVPDVAFERPI 120
                                                          K FV DV  E+ I
Sbjct: 61  LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120

Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP-NTTSSG------- 173
           DP +  HSQESSST+GVFVP P LQHT  V+PG SLYSSP+RS  P NTT+SG       
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U5S68.4e-5154.55Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... [more]
A0A5D3C2V75.5e-5063.73Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68... [more]
A0A5A7UZP91.0e-4853.78Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... [more]
A0A5A7T4E01.5e-4483.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UCZ01.1e-3161.31Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
Match NameE-valueIdentityDescription
TYK04776.16.45e-6563.73envelope-like protein [Cucumis melo var. makuwa][more]
KAA0050594.18.49e-6554.55envelope-like protein [Cucumis melo var. makuwa] >TYK07846.1 envelope-like prote... [more]
KAA0060580.12.83e-6253.78envelope-like protein [Cucumis melo var. makuwa] >TYK02291.1 envelope-like prote... [more]
KAA0036986.12.36e-5383.61uncharacterized protein E6C27_scaffold86G00670 [Cucumis melo var. makuwa] >TYK21... [more]
TYK11261.11.49e-3743.32envelope-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025712.1IVF0025712.1mRNA