Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAGCGAATGTTTCACCAGTCTTCATGAGCCTGTGCCAAAAAAAGTTGTTTCTCGTGATCTTGCGACGATTGCTGAACATGCACCTGGTGCTCCTAAGACTCATATGTTTGATATGGATTCCGATGATCTTAATGATGTTCCTTTGGCTCGTTTGTTGAAGAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGTCTGAATAATGGCCTCGCATCTCCATCTGCTGATGAAACCACACACTTGAGGGAGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA
mRNA sequence
ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA
Coding sequence (CDS)
ATGGTGAACACTCGAAAGGGTTCTTATGCAGCGAAGTCTTCTGAAGATGATCTTGAAGCTCGAATTTCATCGCCCTCAATGCATGTGAGGATGAGAGGTCATCGGTTCAAAAGTACTACACCACGGAGTCCTTATCGTCTTTCATTCAAAAAATCACAAAAGACTTTTGTTCCTGATGTTGCGTTTGAAAGGCCTATAGACCCTCTTGTATCTGATCATTCTCAAGAAAGCTCGTCAACTGATGGTGTGTTTGTTCCTATCCCTGGTCTTCAGCATACTTCTACTGTTAAACCAGGTTCATCACTTTATTCCTCTCCAATTCGGTCTCCTGCTCCAAACACTACTTCCTCTGGGACTGATGTCAATAATGATGGCGATGAGCTTGACCCTATCATTCCTGAAGTTAATACTAGTGAGATCCCTGTTGATGTTGATGTTGATAATACCTTGGCTGCTCCAACTGAGTCTCCTGCATTTCTTGAGGAATCCCGACCTGCAAAGAAGAAGTCGCAACAGAATCGGTGA
Protein sequence
MVNTRKGSYAAKSSEDDLEARISSPSMHVRMRGHRFKSTTPRSPYRLSFKKSQKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQNR
Homology
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match:
A0A5A7U5S6 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001470 PE=4 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 8.4e-51
Identity = 132/242 (54.55%), Postives = 142/242 (58.68%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
MV TR GS+A K E+DLEARISS SMH VRMRG RFKST R PYRLSF+KSQ
Sbjct: 1 MVKTRNGSFATKPFEEDLEARISSLSMHNVRMRGRRFKSTPQRRPYRLSFEKSQANVLVN 60
Query: 61 -----------------------------------------------KTFVPDVAFERPI 120
KT VPDVA ERPI
Sbjct: 61 LHELVSEKVVYRDTATIAKYPPGALEAHMSNMDSNDLDDVPLARLLKKTSVPDVAVERPI 120
Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS--------- 170
DP VSDH QESSST+GV VP PGLQHT T++PG S YSS +RSPAPNTTSS
Sbjct: 121 DPPVSDHFQESSSTEGVLVPTPGLQHTFTLEPGPSFYSSLVRSPAPNTTSSGLNNDHASQ 180
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match:
A0A5D3C2V7 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00920 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 5.5e-50
Identity = 123/193 (63.73%), Postives = 135/193 (69.95%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQKTFVPD 60
MVNTRKGSYAAKSSEDDLEARISSPSMH +RMRGH
Sbjct: 1 MVNTRKGSYAAKSSEDDLEARISSPSMHNMRMRGH------------------------- 60
Query: 61 VAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS-- 120
VA ERPID VSDH+QE+SST+GVFVP PGLQHTST +PG SLYSS ++SP P++TSS
Sbjct: 61 VAVERPIDAPVSDHAQENSSTEGVFVPTPGLQHTSTFEPGPSLYSSLVQSPTPHSTSSSL 120
Query: 121 -----------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFL 174
GTDV+ND DELDP+IP+VNT EIPVDVDVDNTLAAPTESPAF
Sbjct: 121 KNDPASPPADETAALERGTDVHNDDDELDPVIPKVNTCEIPVDVDVDNTLAAPTESPAFP 168
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match:
A0A5A7UZP9 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00990 PE=4 SV=1)
HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 128/238 (53.78%), Postives = 143/238 (60.08%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
MVNTRKGSYAAKSSEDDLEARISSP MH VR++GHRFKST P+ PYRLS +KSQ
Sbjct: 1 MVNTRKGSYAAKSSEDDLEARISSPPMHNVRIKGHRFKSTPPQRPYRLSSEKSQANVSTN 60
Query: 61 -----------------------------------------------KTFVPDVAFERPI 120
KT +PDVA ERPI
Sbjct: 61 LHEPVPKKVVSRDRATIAEHDPGAPATHMFDMDSDDLDDVPLARLLKKTSIPDVAVERPI 120
Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS--------- 164
DP VSDHS+E+SS +GVFVP P LQH STV+PGSSLYSSP++S PNTTSS
Sbjct: 121 DPHVSDHSKENSSPEGVFVPTPNLQHISTVEPGSSLYSSPVQSSTPNTTSSGLNNDTASP 180
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match:
A0A5A7T4E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00280 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44
Identity = 102/122 (83.61%), Postives = 103/122 (84.43%), Query Frame = 0
Query: 53 QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
+KTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKP
Sbjct: 206 KKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKP-------------- 265
Query: 113 NTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 172
GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ
Sbjct: 266 -----GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 308
Query: 173 NR 175
NR
Sbjct: 326 NR 308
BLAST of IVF0025712 vs. ExPASy TrEMBL
Match:
A0A5A7UCZ0 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00190 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 84/137 (61.31%), Postives = 95/137 (69.34%), Query Frame = 0
Query: 53 QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
+KT + +V ERPIDPLVS+HSQESSST+GVFVP GLQH STV+ G SLYSS +RSP P
Sbjct: 422 KKTSITNVVVERPIDPLVSNHSQESSSTEGVFVPTSGLQHISTVESGPSLYSSLVRSPTP 481
Query: 113 NTTSS-------------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAP 171
N TSS G DV+ND DELDP+I EVNT +IP DV+VDNT A P
Sbjct: 482 NPTSSSQNNDPTSPPADETVAPEEGIDVHNDDDELDPVILEVNTGDIPFDVNVDNTSATP 541
BLAST of IVF0025712 vs. NCBI nr
Match:
TYK04776.1 (envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 206 bits (525), Expect = 6.45e-65
Identity = 123/193 (63.73%), Postives = 135/193 (69.95%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQKTFVPD 60
MVNTRKGSYAAKSSEDDLEARISSPSMH +RMRGH
Sbjct: 1 MVNTRKGSYAAKSSEDDLEARISSPSMHNMRMRGH------------------------- 60
Query: 61 VAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSS-- 120
VA ERPID VSDH+QE+SST+GVFVP PGLQHTST +PG SLYSS ++SP P++TSS
Sbjct: 61 VAVERPIDAPVSDHAQENSSTEGVFVPTPGLQHTSTFEPGPSLYSSLVQSPTPHSTSSSL 120
Query: 121 -----------------GTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFL 173
GTDV+ND DELDP+IP+VNT EIPVDVDVDNTLAAPTESPAF
Sbjct: 121 KNDPASPPADETAALERGTDVHNDDDELDPVIPKVNTCEIPVDVDVDNTLAAPTESPAFP 168
BLAST of IVF0025712 vs. NCBI nr
Match:
KAA0050594.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK07846.1 envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 209 bits (531), Expect = 8.49e-65
Identity = 132/242 (54.55%), Postives = 142/242 (58.68%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
MV TR GS+A K E+DLEARISS SMH VRMRG RFKST R PYRLSF+KSQ
Sbjct: 1 MVKTRNGSFATKPFEEDLEARISSLSMHNVRMRGRRFKSTPQRRPYRLSFEKSQANVLVN 60
Query: 61 -----------------------------------------------KTFVPDVAFERPI 120
KT VPDVA ERPI
Sbjct: 61 LHELVSEKVVYRDTATIAKYPPGALEAHMSNMDSNDLDDVPLARLLKKTSVPDVAVERPI 120
Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSGT------- 169
DP VSDH QESSST+GV VP PGLQHT T++PG S YSS +RSPAPNTTSSG
Sbjct: 121 DPPVSDHFQESSSTEGVLVPTPGLQHTFTLEPGPSFYSSLVRSPAPNTTSSGLNNDHASQ 180
BLAST of IVF0025712 vs. NCBI nr
Match:
KAA0060580.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK02291.1 envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 202 bits (514), Expect = 2.83e-62
Identity = 128/238 (53.78%), Postives = 143/238 (60.08%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
MVNTRKGSYAAKSSEDDLEARISSP MH VR++GHRFKST P+ PYRLS +KSQ
Sbjct: 1 MVNTRKGSYAAKSSEDDLEARISSPPMHNVRIKGHRFKSTPPQRPYRLSSEKSQANVSTN 60
Query: 61 -----------------------------------------------KTFVPDVAFERPI 120
KT +PDVA ERPI
Sbjct: 61 LHEPVPKKVVSRDRATIAEHDPGAPATHMFDMDSDDLDDVPLARLLKKTSIPDVAVERPI 120
Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAPNTTSSG-------- 163
DP VSDHS+E+SS +GVFVP P LQH STV+PGSSLYSSP++S PNTTSSG
Sbjct: 121 DPHVSDHSKENSSPEGVFVPTPNLQHISTVEPGSSLYSSPVQSSTPNTTSSGLNNDTASP 180
BLAST of IVF0025712 vs. NCBI nr
Match:
KAA0036986.1 (uncharacterized protein E6C27_scaffold86G00670 [Cucumis melo var. makuwa] >TYK21219.1 uncharacterized protein E5676_scaffold359G00280 [Cucumis melo var. makuwa])
HSP 1 Score: 187 bits (475), Expect = 2.36e-53
Identity = 102/122 (83.61%), Postives = 103/122 (84.43%), Query Frame = 0
Query: 53 QKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP 112
+KTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPG
Sbjct: 206 KKTFVPDVAFERPIDPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPG------------- 265
Query: 113 NTTSSGTDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 172
TDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ
Sbjct: 266 ------TDVNNDGDELDPIIPEVNTSEIPVDVDVDNTLAAPTESPAFLEESRPAKKKSQQ 308
Query: 173 NR 174
NR
Sbjct: 326 NR 308
BLAST of IVF0025712 vs. NCBI nr
Match:
TYK11261.1 (envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 140 bits (353), Expect = 1.49e-37
Identity = 107/247 (43.32%), Postives = 126/247 (51.01%), Query Frame = 0
Query: 1 MVNTRKGSYAAKSSEDDLEARISSPSMH-VRMRGHRFKSTTPRSPYRLSFKKSQ------ 60
MVNTRKG+YAAKSS+D LE +I SMH V + G FKST P+ PYRL +KSQ
Sbjct: 1 MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLCFKSTPPQRPYRLLLEKSQAHVFDR 60
Query: 61 -----------------------------------------------KTFVPDVAFERPI 120
K FV DV E+ I
Sbjct: 61 LYEPVQDDVDSRNPATNLEHAPGAPESHMSNMDSDDLDDVPLARLLKKNFVLDVVAEKYI 120
Query: 121 DPLVSDHSQESSSTDGVFVPIPGLQHTSTVKPGSSLYSSPIRSPAP-NTTSSG------- 173
DP + HSQESSST+GVFVP P LQHT V+PG SLYSSP+RS P NTT+SG
Sbjct: 121 DPPILVHSQESSSTEGVFVPTPSLQHTLNVEPGPSLYSSPVRSSIPKNTTTSGPHNDSAP 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U5S6 | 8.4e-51 | 54.55 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... | [more] |
A0A5D3C2V7 | 5.5e-50 | 63.73 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68... | [more] |
A0A5A7UZP9 | 1.0e-48 | 53.78 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... | [more] |
A0A5A7T4E0 | 1.5e-44 | 83.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UCZ0 | 1.1e-31 | 61.31 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
Match Name | E-value | Identity | Description | |
TYK04776.1 | 6.45e-65 | 63.73 | envelope-like protein [Cucumis melo var. makuwa] | [more] |
KAA0050594.1 | 8.49e-65 | 54.55 | envelope-like protein [Cucumis melo var. makuwa] >TYK07846.1 envelope-like prote... | [more] |
KAA0060580.1 | 2.83e-62 | 53.78 | envelope-like protein [Cucumis melo var. makuwa] >TYK02291.1 envelope-like prote... | [more] |
KAA0036986.1 | 2.36e-53 | 83.61 | uncharacterized protein E6C27_scaffold86G00670 [Cucumis melo var. makuwa] >TYK21... | [more] |
TYK11261.1 | 1.49e-37 | 43.32 | envelope-like protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |