IVF0025458 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA ATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA ATGGCAAATTCTCGTATAGCGAGGTTTGTTACTGAGGTTGCACCACCACAGATTATCAGTGTCATGAGGCGCCGCACATCAAAAGTGTTGGATACCATCAGTGAAGAGGATAGAGAGTGCAACAAGAATGAATACCCTGCTGCTCCCCAAAGAAGCCTATCATCGTCATCTACCTCTGCCTCTATGGCTGTTGGTGCCAATTCTATGTACTTCGTCCGAAACATAAGCAGACCTTTCTCCAAATTCAATGATTGA MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEDRECNKNEYPAAPQRSLSSSSTSASMAVGANSMYFVRNISRPFSKFND Homology
BLAST of IVF0025458 vs. ExPASy TrEMBL
Match: A0A5D3CN92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009220 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.8e-36 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0025458 vs. ExPASy TrEMBL
Match: A0A0A0KI68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524100 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.8e-33 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of IVF0025458 vs. ExPASy TrEMBL
Match: A0A7N2LPW5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.5e-13 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of IVF0025458 vs. ExPASy TrEMBL
Match: B9S0W8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0630180 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.8e-13 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of IVF0025458 vs. ExPASy TrEMBL
Match: A0A3N7FR06 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081001 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of IVF0025458 vs. NCBI nr
Match: KAA0052524.1 (hypothetical protein E6C27_scaffold120G001250 [Cucumis melo var. makuwa] >TYK13301.1 hypothetical protein E5676_scaffold255G009220 [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (408), Expect = 8.20e-50 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0025458 vs. NCBI nr
Match: KGN49420.1 (hypothetical protein Csa_003492 [Cucumis sativus]) HSP 1 Score: 152 bits (383), Expect = 5.35e-46 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of IVF0025458 vs. NCBI nr
Match: KAG6594447.1 (hypothetical protein SDJN03_11000, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114 bits (285), Expect = 4.61e-31 Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 0
BLAST of IVF0025458 vs. NCBI nr
Match: KAG7034740.1 (hypothetical protein SDJN02_04470, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101 bits (252), Expect = 2.20e-25 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of IVF0025458 vs. NCBI nr
Match: XP_025013214.1 (uncharacterized protein LOC8284058 [Ricinus communis] >EEF42610.1 conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 84.3 bits (207), Expect = 4.13e-19 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of IVF0025458 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-11 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of IVF0025458 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein ) HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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