IVF0025378 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGTGATGACGTTGATGACGTGGACGAGGGGGACTTCGCGTACGCGACGACCACCACTATAGAAGAAATTCACTACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCGACAAACTAGCTGAATCGATGTTCACAGACTGGCAGTTACGTAACGCTTAG ATGACATATTGTGATGACGTTGATGACGTGGACGAGGGGGACTTCGCGTACGCGACGACCACCACTATAGAAGAAATTCACTACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCGACAAACTAGCTGAATCGATGTTCACAGACTGGCAGTTACGTAACGCTTAG ATGACATATTGTGATGACGTTGATGACGTGGACGAGGGGGACTTCGCGTACGCGACGACCACCACTATAGAAGAAATTCACTACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCGACAAACTAGCTGAATCGATGTTCACAGACTGGCAGTTACGTAACGCTTAG MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA Homology
BLAST of IVF0025378 vs. ExPASy TrEMBL
Match: A0A1S3BNP1 (uncharacterized protein LOC103492066 OS=Cucumis melo OX=3656 GN=LOC103492066 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0025378 vs. ExPASy TrEMBL
Match: A0A5A7UJ27 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00570 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-22 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of IVF0025378 vs. ExPASy TrEMBL
Match: A0A5D3DXP6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00500 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-22 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of IVF0025378 vs. ExPASy TrEMBL
Match: A0A5A7VGD3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00510 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0025378 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0025378 vs. NCBI nr
Match: XP_008450472.1 (PREDICTED: uncharacterized protein LOC103492066 [Cucumis melo]) HSP 1 Score: 119 bits (299), Expect = 2.57e-32 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0025378 vs. NCBI nr
Match: TYK28139.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (283), Expect = 5.30e-30 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of IVF0025378 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (266), Expect = 5.13e-29 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0025378 vs. NCBI nr
Match: KAA0066137.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15182.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (274), Expect = 5.43e-29 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0025378 vs. NCBI nr
Match: KAA0055933.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (283), Expect = 8.00e-28 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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