IVF0024592 (gene) Melon (IVF77) v1

Overview


Name	IVF0024592
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosomal protein S4
Location	tig00007088: 1012576 .. 1013730 (+)
RNA-Seq Expression	IVF0024592
Synteny	IVF0024592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTTTGCTCCTGGTTAGGACATCTACTTTTCACGTCTTTGACACGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGAGGGATGAAAGAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAAGAGAGAACTGACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTGAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAAGGAGCGGTTCAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTCAGAATGTGGAGAAGAAATCAAAGAGAATGGTTCCACCTACTCAAAACTCAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

mRNA sequence

ATGTCTTTTTTGCTCCTGGTTAGGACATCTACTTTTCACGTCTTTGACACGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGAGGGATGAAAGAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAAGAGAGAACTGACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTGAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAAGGAGCGGTTCAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTCAGAATGTGGAGAAGAAATCAAAGAGAATGGTTCCACCTACTCAAAACTCAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

Coding sequence (CDS)

ATGTCTTTTTTGCTCCTGGTTAGGACATCTACTTTTCACGTCTTTGACACGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGAGGGATGAAAGAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAAGAGAGAACTGACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTGAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAAGAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTTCAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCAAAATTACTCATTTTCAAGTGTCCCACGGTGATCTAATATCTTTTCAAGAAAATGAGGCGAGAAGGAGCGGTTCAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGACAAAATCATAGGCAAATTCCTGGATCACCCGGTCAGAATGTGGAGAAGAAATCAAAGAGAATGGTTCCACCTACTCAAAACTCAGAGGGGATGCCGCCTACTACGAAAATCCCGGTTTTTGCAAGAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAAGAGAATGAAGAGGAATTTGTATCATTTTCAATCCCTATTCTTATCGAATAGAAGGAAGGAGAAAAACCTCAATCTTCCTACTCGAAGAAGAAGTCCTATAGAAAACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGTCTCTCACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAA

Protein sequence

MSFLLLVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

Homology

[Close]

BLAST of IVF0024592 vs. ExPASy Swiss-Prot
Match: Q31708 (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1 SV=2)

HSP 1 Score: 518.1 bits (1333), Expect = 8.6e-146
Identity = 279/360 (77.50%), Postives = 303/360 (84.17%), Query Frame = 0


Query: 28  KKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSI-KRKIYPRENLN 87
           KK  +R   L  LRFQTCRLL GNV  RELTIIQRRILR+LRN+KRSI KRKIYP++ L 
Sbjct: 5   KKLIQRDIDLSPLRFQTCRLLSGNVWNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLT 64

Query: 88  SYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQAR 147
           SYIQ QTTRKLP F+GDLPITEMHRG +RTSYIPF LN ETR DVIP+RL+F  TIPQAR
Sbjct: 65  SYIQLQTTRKLPFFYGDLPITEMHRGTKRTSYIPFLLNLETRFDVIPLRLYFLETIPQAR 124

Query: 148 QPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFL 207
           Q ISHRRVCVNKGMV ITHF++SHGD+ISFQEN A   G EIRRSFY EI V+KIIGK L
Sbjct: 125 QLISHRRVCVNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLL 184

Query: 208 DHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGS 267
             P+RMWRR++ EWFHLLKT+RGCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGS
Sbjct: 185 HQPLRMWRRSKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGS 244

Query: 268 SFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNS--SLYSNSTYCSASPHQ 327
           SFAEHKRMKRNL   +SLFLS RRK+KNLNLPTR  SPI  NS  SLYSNSTYC ASPH+
Sbjct: 245 SFAEHKRMKRNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHK 304

Query: 328 FTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 385
            TMK +IK + LPTHY EVN+RT KAVV YGPNIGHIPHDIRLKD NL L S NGRGQNI
Sbjct: 305 LTMKRRIKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGRGQNI 362

[Close]

BLAST of IVF0024592 vs. ExPASy Swiss-Prot
Match: P26866 (Ribosomal protein S4, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS4 PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 71/159 (44.65%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 39  ALRFQTCRLLLGNV-RKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKL 98
           A RF+ CR +L NV + ++LT+ Q+ ++ +L+ +K++ K+  +        IQ QT +KL
Sbjct: 3   ASRFKVCRQILENVWQTKKLTLKQKFLISELQKQKKNKKQSDFS-------IQLQTIKKL 62

Query: 99  PLFHGDLPITEMHRGRERTSYI----PFPLNPETRSDVIPVRLHFSSTIPQARQPISHRR 158
            LF+G+LPI +M R +  T YI        N E R DVI VRL+F ST+ QARQ ISH+ 
Sbjct: 63  SLFYGNLPIKKMQRAKTHT-YIDKKNSLLFNIEKRLDVILVRLNFCSTMFQARQLISHKN 122

Query: 159 VCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSF 193
           +CVN   V I  FQVS+GDLIS QEN      S IR++F
Sbjct: 123 ICVNYKKVNIPGFQVSNGDLISIQENSLDFFKSNIRKNF 153

[Close]

BLAST of IVF0024592 vs. ExPASy Swiss-Prot
Match: Q5F5V1 (30S ribosomal protein S4 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rpsD PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE------- 185
           E+R D +  R+ F ST  +ARQ +SH+ + VN  +V I  FQV  GD++S +E       
Sbjct: 95  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVR 154

Query: 186 -NEARRSGSEIRRSFYIEISVDKIIGKFLDHPVR 212
             EA    ++I    ++ +  DK+ G F + P R
Sbjct: 155 IQEALGLATQIGLPGWVSVDADKLEGVFKNMPDR 188

[Close]

BLAST of IVF0024592 vs. ExPASy Swiss-Prot
Match: A9M3U1 (30S ribosomal protein S4 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rpsD PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE------- 185
           E+R D +  R+ F ST  +ARQ +SH+ + VN  +V I  FQV  GD++S +E       
Sbjct: 95  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVR 154

Query: 186 -NEARRSGSEIRRSFYIEISVDKIIGKFLDHPVR 212
             EA    ++I    ++ +  DK+ G F + P R
Sbjct: 155 IQEALGLATQIGLPGWVSVDADKLEGVFKNMPDR 188

[Close]

BLAST of IVF0024592 vs. ExPASy Swiss-Prot
Match: P66560 (30S ribosomal protein S4 OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rpsD PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQE------- 185
           E+R D +  R+ F ST  +ARQ +SH+ + VN  +V I  FQV  GD++S +E       
Sbjct: 95  ESRLDNVVYRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVR 154

Query: 186 -NEARRSGSEIRRSFYIEISVDKIIGKFLDHPVR 212
             EA    ++I    ++ +  DK+ G F + P R
Sbjct: 155 IQEALGLATQIGLPGWVSVDADKLEGVFKNMPDR 188

[Close]

BLAST of IVF0024592 vs. ExPASy TrEMBL
Match: G3EU07 (Ribosomal protein S4 OS=Cucumis melo subsp. melo OX=412675 GN=rps4 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.1e-212
Identity = 378/379 (99.74%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 6   LVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 65
           +VRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL
Sbjct: 1   MVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 60

Query: 66  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 125
           RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP
Sbjct: 61  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 120

Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 185
           ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG
Sbjct: 121 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 180

Query: 186 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 245
           SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS
Sbjct: 181 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 240

Query: 246 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 305
           MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI
Sbjct: 241 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 300

Query: 306 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 365
           ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI
Sbjct: 301 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 360

Query: 366 RLKDPNLPLRSGNGRGQNI 385
           RLKDPNLPLRSGNGRGQNI
Sbjct: 361 RLKDPNLPLRSGNGRGQNI 379

[Close]

BLAST of IVF0024592 vs. ExPASy TrEMBL
Match: A0A3S9JII7 (Ribosomal protein S4 OS=Cucumis melo var. momordica OX=2034244 GN=rps4 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.1e-212
Identity = 378/379 (99.74%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 6   LVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 65
           +VRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL
Sbjct: 1   MVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 60

Query: 66  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 125
           RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP
Sbjct: 61  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 120

Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 185
           ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG
Sbjct: 121 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 180

Query: 186 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 245
           SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS
Sbjct: 181 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 240

Query: 246 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 305
           MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI
Sbjct: 241 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 300

Query: 306 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 365
           ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI
Sbjct: 301 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 360

Query: 366 RLKDPNLPLRSGNGRGQNI 385
           RLKDPNLPLRSGNGRGQNI
Sbjct: 361 RLKDPNLPLRSGNGRGQNI 379

[Close]

BLAST of IVF0024592 vs. ExPASy TrEMBL
Match: A0A5A7SRE6 (Ribosomal protein S4 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45081G00020 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0


Query: 9   TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL 68
           TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL
Sbjct: 47  TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL 106

Query: 69  RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR 128
           RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR
Sbjct: 107 RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR 166

Query: 129 SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI 188
           SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI
Sbjct: 167 SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI 226

Query: 189 RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE 248
           RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE
Sbjct: 227 RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE 286

Query: 249 EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN 308
           EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN
Sbjct: 287 EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN 346

Query: 309 SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK 368
           SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK
Sbjct: 347 SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK 406

Query: 369 DPNLPLRSGNGRGQNI 385
           DPNLPLRSGNGRGQNI
Sbjct: 407 DPNLPLRSGNGRGQNI 422

[Close]

BLAST of IVF0024592 vs. ExPASy TrEMBL
Match: G3EIY6 (Ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.0e-194
Identity = 348/356 (97.75%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 29  KRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSY 88
           +RDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILR LRNKKRSIKRKIYPRENLNSY
Sbjct: 5   ERDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRNLRNKKRSIKRKIYPRENLNSY 64

Query: 89  IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP 148
           IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP
Sbjct: 65  IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP 124

Query: 149 ISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDH 208
           ISHRRVCVNKGMVKITHFQVSHGDLISFQENEAR  GSEIRRSFY EISVDKIIGKFLDH
Sbjct: 125 ISHRRVCVNKGMVKITHFQVSHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDH 184

Query: 209 PVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF 268
           PVRMWRRN+REWFHLLKT+RGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF
Sbjct: 185 PVRMWRRNKREWFHLLKTKRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF 244

Query: 269 AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMK 328
           AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSS YSNSTYCSASPHQFTMK
Sbjct: 245 AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMK 304

Query: 329 SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 385
           SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 305 SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 360

[Close]

BLAST of IVF0024592 vs. ExPASy TrEMBL
Match: A0A7D6BZG8 (Ribosomal protein S4 OS=Luffa acutangula OX=56866 GN=rps4 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180
Identity = 324/354 (91.53%), Postives = 332/354 (93.79%), Query Frame = 0


Query: 31  DERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 90
           D  RYALPALRFQTCRLLLGNVR RELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ
Sbjct: 2   DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 61

Query: 91  SQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPIS 150
           SQTTRKLPLFHGDLPITEMHRG ERTSYIPFPLNPETRSDVIPVRLHFS TIPQARQPIS
Sbjct: 62  SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 121

Query: 151 HRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDHPV 210
           HRRVCVNKGMV ITHF+VSHGD ISFQEN+AR  G EIRRSFYIEISV+KIIGKFLDHPV
Sbjct: 122 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 181

Query: 211 RMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAE 270
           RMWRR + EWFHLLKT+RGCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAE
Sbjct: 182 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 241

Query: 271 HKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMKSK 330
           H RMKRNLYH +SLFLSNRR EKN NLPTR RSPI  NSSLYSNSTYCSASPHQFTMKSK
Sbjct: 242 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 301

Query: 331 IKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 385
           IK + LPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 302 IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 355

[Close]

BLAST of IVF0024592 vs. NCBI nr
Match: AEN56127.1 (ribosomal protein S4 [Cucumis melo subsp. melo] >AZP40284.1 ribosomal protein S4 [Cucumis melo var. momordica])

HSP 1 Score: 743 bits (1918), Expect = 3.49e-270
Identity = 378/379 (99.74%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 6   LVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 65
           +VRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL
Sbjct: 1   MVRTSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRIL 60

Query: 66  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 125
           RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP
Sbjct: 61  RKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNP 120

Query: 126 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 185
           ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG
Sbjct: 121 ETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSG 180

Query: 186 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 245
           SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS
Sbjct: 181 SEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSS 240

Query: 246 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 305
           MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI
Sbjct: 241 MQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPI 300

Query: 306 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 365
           ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI
Sbjct: 301 ENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDI 360

Query: 366 RLKDPNLPLRSGNGRGQNI 384
           RLKDPNLPLRSGNGRGQNI
Sbjct: 361 RLKDPNLPLRSGNGRGQNI 379

[Close]

BLAST of IVF0024592 vs. NCBI nr
Match: KAA0032616.1 (ribosomal protein S4 [Cucumis melo var. makuwa])

HSP 1 Score: 739 bits (1908), Expect = 5.88e-268
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0


Query: 9   TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL 68
           TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL
Sbjct: 47  TSTFHVFDTGSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKL 106

Query: 69  RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR 128
           RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR
Sbjct: 107 RNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETR 166

Query: 129 SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI 188
           SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI
Sbjct: 167 SDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEI 226

Query: 189 RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE 248
           RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE
Sbjct: 227 RRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQE 286

Query: 249 EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN 308
           EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN
Sbjct: 287 EDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENN 346

Query: 309 SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK 368
           SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK
Sbjct: 347 SSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLK 406

Query: 369 DPNLPLRSGNGRGQNI 384
           DPNLPLRSGNGRGQNI
Sbjct: 407 DPNLPLRSGNGRGQNI 422

[Close]

BLAST of IVF0024592 vs. NCBI nr
Match: YP_004849334.1 (ribosomal protein S4 [Cucumis sativus] >ADZ10761.1 ribosomal protein S4 [Cucumis sativus])

HSP 1 Score: 684 bits (1764), Expect = 5.04e-247
Identity = 348/356 (97.75%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 29  KRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSY 88
           +RDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILR LRNKKRSIKRKIYPRENLNSY
Sbjct: 5   ERDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRNLRNKKRSIKRKIYPRENLNSY 64

Query: 89  IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP 148
           IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP
Sbjct: 65  IQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQP 124

Query: 149 ISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDH 208
           ISHRRVCVNKGMVKITHFQVSHGDLISFQENEAR  GSEIRRSFY EISVDKIIGKFLDH
Sbjct: 125 ISHRRVCVNKGMVKITHFQVSHGDLISFQENEARIRGSEIRRSFYKEISVDKIIGKFLDH 184

Query: 209 PVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF 268
           PVRMWRRN+REWFHLLKT+RGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF
Sbjct: 185 PVRMWRRNKREWFHLLKTKRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSF 244

Query: 269 AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMK 328
           AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSS YSNSTYCSASPHQFTMK
Sbjct: 245 AEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSFYSNSTYCSASPHQFTMK 304

Query: 329 SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 384
           SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 305 SKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 360

[Close]

BLAST of IVF0024592 vs. NCBI nr
Match: YP_009913620.1 (ribosomal protein S4 [Luffa acutangula] >QLJ93050.1 ribosomal protein S4 [Luffa acutangula])

HSP 1 Score: 637 bits (1642), Expect = 1.62e-228
Identity = 324/354 (91.53%), Postives = 332/354 (93.79%), Query Frame = 0


Query: 31  DERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 90
           D  RYALPALRFQTCRLLLGNVR RELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ
Sbjct: 2   DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 61

Query: 91  SQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQARQPIS 150
           SQTTRKLPLFHGDLPITEMHRG ERTSYIPFPLNPETRSDVIPVRLHFS TIPQARQPIS
Sbjct: 62  SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 121

Query: 151 HRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFLDHPV 210
           HRRVCVNKGMV ITHF+VSHGD ISFQEN+AR  G EIRRSFYIEISV+KIIGKFLDHPV
Sbjct: 122 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 181

Query: 211 RMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAE 270
           RMWRR + EWFHLLKT+RGCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGSSFAE
Sbjct: 182 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 241

Query: 271 HKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNSSLYSNSTYCSASPHQFTMKSK 330
           H RMKRNLYH +SLFLSNRR EKN NLPTR RSPI  NSSLYSNSTYCSASPHQFTMKSK
Sbjct: 242 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 301

Query: 331 IKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 384
           IK + LPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 302 IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 355

[Close]

BLAST of IVF0024592 vs. NCBI nr
Match: WP_131747055.1 (hypothetical protein [Candidatus Frankia meridionalis])

HSP 1 Score: 624 bits (1608), Expect = 1.55e-222
Identity = 323/384 (84.11%), Postives = 339/384 (88.28%), Query Frame = 0


Query: 5   LLVRTSTFHVFDTGS----IPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTII 64
           LL R+ TF +    +     P+     K+  +R   + ALRF+TCRLLLGNVR RELTII
Sbjct: 22  LLDRSLTFSIRPPAAEGVRFPLYAMWRKRLIQRDMTMTALRFKTCRLLLGNVRNRELTII 81

Query: 65  QRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIP 124
           QRRILRKLRNKKRSIKRKIYPR NLNSYIQSQTTRKLPLFHGDLPITEMHRG ERTSYIP
Sbjct: 82  QRRILRKLRNKKRSIKRKIYPRSNLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 141

Query: 125 FPLNPETRSDVIPVRLHFSSTIPQARQPISHRRVCVNKGMVKITHFQVSHGDLISFQENE 184
           FPLNPETRSDVIPVRLHF  TIPQARQPISHRRVCVNKGMV ITHF+VSHGDLISFQEN+
Sbjct: 142 FPLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQEND 201

Query: 185 ARRSGSEIRRSFYIEISVDKIIGKFLDHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQ 244
           AR  G EIRRSFYIEISV+KIIGKFLDHPVRMWRR + EWFHLLKT+RGCRLL KSRFLQ
Sbjct: 202 ARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQ 261

Query: 245 ELRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTR 304
           +LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRN YHF+SLFLSNRR EKN NLPTR
Sbjct: 262 QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNFYHFKSLFLSNRRNEKNRNLPTR 321

Query: 305 RRSPIENNSSLYSNSTYCSASPHQFTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGH 364
            RSPI  NSSLYSNSTYCSASPHQFTMK KIK + LPTHYSEVNHRTLKAVVSYGPNIGH
Sbjct: 322 TRSPIVYNSSLYSNSTYCSASPHQFTMKRKIKRIELPTHYSEVNHRTLKAVVSYGPNIGH 381

Query: 365 IPHDIRLKDPNLPLRSGNGRGQNI 384
           IPHDIRLKDPNLPLRSGNGRGQNI
Sbjct: 382 IPHDIRLKDPNLPLRSGNGRGQNI 405

[Close]

BLAST of IVF0024592 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 558.9 bits (1439), Expect = 3.1e-159
Identity = 293/360 (81.39%), Postives = 314/360 (87.22%), Query Frame = 0


Query: 28  KKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSI-KRKIYPRENLN 87
           KK  +R   L  LRFQTCRLL GNVR RELTIIQRRILR+LRN+KRSI KRKIYP++ L 
Sbjct: 5   KKLIQRDIDLSPLRFQTCRLLSGNVRNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLT 64

Query: 88  SYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQAR 147
           SYIQ QTTRKLPLFHGDLPITEMHRG +RTSYIPFPLNPETR DVIP+RLHF  TIPQAR
Sbjct: 65  SYIQLQTTRKLPLFHGDLPITEMHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQAR 124

Query: 148 QPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFL 207
           QPISHRRVCVNKGMV ITHF++SHGD+ISFQEN A   G EIRRSFY EISV+KIIGK L
Sbjct: 125 QPISHRRVCVNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLL 184

Query: 208 DHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGS 267
             P+RMWRR++ EWFHLLKT+RGCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGS
Sbjct: 185 HQPLRMWRRSKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGS 244

Query: 268 SFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNS--SLYSNSTYCSASPHQ 327
           SFAEHKRMKRNL   +SLFLS RRK+KNLNLPTR  SPI  NS  SLYSNSTYC ASPH+
Sbjct: 245 SFAEHKRMKRNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHK 304

Query: 328 FTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 385
            TMK +IK + LPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Sbjct: 305 LTMKRRIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLPLRSRNGRGQNI 362

[Close]

BLAST of IVF0024592 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 )

HSP 1 Score: 558.9 bits (1439), Expect = 3.1e-159
Identity = 293/360 (81.39%), Postives = 314/360 (87.22%), Query Frame = 0


Query: 28  KKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSI-KRKIYPRENLN 87
           KK  +R   L  LRFQTCRLL GNVR RELTIIQRRILR+LRN+KRSI KRKIYP++ L 
Sbjct: 5   KKLIQRDIDLSPLRFQTCRLLSGNVRNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLT 64

Query: 88  SYIQSQTTRKLPLFHGDLPITEMHRGRERTSYIPFPLNPETRSDVIPVRLHFSSTIPQAR 147
           SYIQ QTTRKLPLFHGDLPITEMHRG +RTSYIPFPLNPETR DVIP+RLHF  TIPQAR
Sbjct: 65  SYIQLQTTRKLPLFHGDLPITEMHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQAR 124

Query: 148 QPISHRRVCVNKGMVKITHFQVSHGDLISFQENEARRSGSEIRRSFYIEISVDKIIGKFL 207
           QPISHRRVCVNKGMV ITHF++SHGD+ISFQEN A   G EIRRSFY EISV+KIIGK L
Sbjct: 125 QPISHRRVCVNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLL 184

Query: 208 DHPVRMWRRNQREWFHLLKTQRGCRLLRKSRFLQELRSSMQEEDLERTKKFGSEKVCLGS 267
             P+RMWRR++ EWFHLLKT+RGCRLL KSRFLQ+LRSSMQEEDLERTKKFGSEKVCLGS
Sbjct: 185 HQPLRMWRRSKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGS 244

Query: 268 SFAEHKRMKRNLYHFQSLFLSNRRKEKNLNLPTRRRSPIENNS--SLYSNSTYCSASPHQ 327
           SFAEHKRMKRNL   +SLFLS RRK+KNLNLPTR  SPI  NS  SLYSNSTYC ASPH+
Sbjct: 245 SFAEHKRMKRNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHK 304

Query: 328 FTMKSKIKSLSLPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI 385
            TMK +IK + LPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Sbjct: 305 LTMKRRIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLPLRSRNGRGQNI 362

The following BLAST results are available for this feature:

BLAST of IVF0024592 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q31708	8.6e-146	77.50	Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1...	[more]
P26866	1.7e-21	44.65	Ribosomal protein S4, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS4 PE=...	[more]
Q5F5V1	2.1e-06	34.04	30S ribosomal protein S4 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)...	[more]
A9M3U1	2.1e-06	34.04	30S ribosomal protein S4 OS=Neisseria meningitidis serogroup C (strain 053442) O...	[more]
P66560	2.1e-06	34.04	30S ribosomal protein S4 OS=Neisseria meningitidis serogroup A / serotype 4A (st...	[more]

BLAST of IVF0024592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU07	1.1e-212	99.74	Ribosomal protein S4 OS=Cucumis melo subsp. melo OX=412675 GN=rps4 PE=3 SV=1	[more]
A0A3S9JII7	1.1e-212	99.74	Ribosomal protein S4 OS=Cucumis melo var. momordica OX=2034244 GN=rps4 PE=3 SV=1	[more]
A0A5A7SRE6	1.6e-211	100.00	Ribosomal protein S4 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
G3EIY6	1.0e-194	97.75	Ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1	[more]
A0A7D6BZG8	1.5e-180	91.53	Ribosomal protein S4 OS=Luffa acutangula OX=56866 GN=rps4 PE=3 SV=1	[more]

BLAST of IVF0024592 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56127.1	3.49e-270	99.74	ribosomal protein S4 [Cucumis melo subsp. melo] >AZP40284.1 ribosomal protein S4...	[more]
KAA0032616.1	5.88e-268	100.00	ribosomal protein S4 [Cucumis melo var. makuwa]	[more]
YP_004849334.1	5.04e-247	97.75	ribosomal protein S4 [Cucumis sativus] >ADZ10761.1 ribosomal protein S4 [Cucumis...	[more]
YP_009913620.1	1.62e-228	91.53	ribosomal protein S4 [Luffa acutangula] >QLJ93050.1 ribosomal protein S4 [Luffa ...	[more]
WP_131747055.1	1.55e-222	84.11	hypothetical protein [Candidatus Frankia meridionalis]	[more]

BLAST of IVF0024592 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07734.1	3.1e-159	81.39	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]
ATMG00290.1	3.1e-159	81.39	mitochondrial ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 127..189 e-value: 7.3E-7 score: 38.8
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 130..174 e-value: 3.8E-9 score: 36.1
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 128..184 e-value: 7.30998E-10 score: 52.637
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 126..220 e-value: 3.3E-14 score: 55.1
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 41..311
None	No IPR available	PANTHER	PTHR11831:SF30	RIBOSOMAL PROTEIN S4-RELATED	coord: 41..311
None	No IPR available	PROSITE	PS50889	S4	coord: 130..198 score: 9.431696
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 68..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024592.1	IVF0024592.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding