IVF0024424 (gene) Melon (IVF77) v1

Overview


Name	IVF0024424
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr02: 11381282 .. 11381868 (-)
RNA-Seq Expression	IVF0024424
Synteny	IVF0024424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTAACAAAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGAACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGACTGGGAAAAGATAACAAGGGGACTCGGAAGTGATTTCTCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAGGAGAAACGCGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTATTGTTTGATACCCACCAGAGAAAAAGACATAACGAAGATTCTGAGATCTCGATTGCAGTTGTATCCGAGAATATTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCCGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCACAAAAGTAA

mRNA sequence

ATGTTTGTAACAAAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGAACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGGGACTCGGAAGTGATTTCTCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAGGAGAAACGCGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTATTGTTTGATACCCACCAGAGAAAAAGACATAACGAAGATTCTGAGATCTCGATTGCAGTTGTATCCGAGAATATTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCCGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCACAAAAGTAA

Coding sequence (CDS)

ATGTTTGTAACAAAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGAACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGGGACTCGGAAGTGATTTCTCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAGGAGAAACGCGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTATTGTTTGATACCCACCAGAGAAAAAGACATAACGAAGATTCTGAGATCTCGATTGCAGTTGTATCCGAGAATATTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCCGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCACAAAAGTAA

Protein sequence

MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSGDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK

Homology

[Close]

BLAST of IVF0024424 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.3e-91
Identity = 177/195 (90.77%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1    MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKS- 60
            MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSM+RYVSKTSLMIAKTMIKS 
Sbjct: 945  MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 1004

Query: 61   ------------GDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                        GDSEVISLPKAKE FGLGYKPVTSEWEKVRAKKKE+R+ALLMGCEMKE
Sbjct: 1005 FQMHKGLGKDNQGDSEVISLPKAKENFGLGYKPVTSEWEKVRAKKKEKRSALLMGCEMKE 1064

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
            ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN
Sbjct: 1065 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 1124

Query: 181  WEIKKTLKVTKGSQK 183
            WEIKK+LKVTKGSQK
Sbjct: 1125 WEIKKSLKVTKGSQK 1139

[Close]

BLAST of IVF0024424 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.7e-89
Identity = 175/195 (89.74%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1    MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKS- 60
            MFVTKTSVLPYVEATEEALECSYRSFE ANATIFPTEGLSM+RYVSKTSLMIAKTMIKS 
Sbjct: 1403 MFVTKTSVLPYVEATEEALECSYRSFEFANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 1462

Query: 61   ------------GDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                        GDSEVISLPKAKEKFGLGYKPVTSE EKVRAKKKE+R+ALLMGCEMKE
Sbjct: 1463 FQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSECEKVRAKKKEKRSALLMGCEMKE 1522

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
            ERISIPHLSETFKLGELLFDTHQRKRHNEDSEI IAVVSEN SLPHPLVHKCPPGFELNN
Sbjct: 1523 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEILIAVVSENTSLPHPLVHKCPPGFELNN 1582

Query: 181  WEIKKTLKVTKGSQK 183
            WEIKKTLKVTKGSQK
Sbjct: 1583 WEIKKTLKVTKGSQK 1597

[Close]

BLAST of IVF0024424 vs. ExPASy TrEMBL
Match: A0A5A7TI68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00990 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 162/195 (83.08%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKS- 60
           MFVTK S LPYVEATEEALECSYRSFEIANATIFP EGLSM+RYVSKTSLMIAKTMIKS 
Sbjct: 317 MFVTKISTLPYVEATEEALECSYRSFEIANATIFPIEGLSMDRYVSKTSLMIAKTMIKSC 376

Query: 61  ------------GDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                       GDS+VISLPKAKEKFGLGYKP  SEWEKVRAKKKE+R+ LL+GCEMKE
Sbjct: 377 FQMHKGLGKDNQGDSKVISLPKAKEKFGLGYKPAASEWEKVRAKKKEKRSTLLVGCEMKE 436

Query: 121 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
           ERISIPHL ETFK  ELLFDT+QRKR NEDSEISIAVVSEN SL HPLVH+CPPGFELNN
Sbjct: 437 ERISIPHLFETFKPEELLFDTNQRKRRNEDSEISIAVVSENTSLSHPLVHQCPPGFELNN 496

Query: 181 WEIKKTLKVTKGSQK 183
           WEIKKTL+VTKGSQK
Sbjct: 497 WEIKKTLEVTKGSQK 511

[Close]

BLAST of IVF0024424 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 156/175 (89.14%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 21   CSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKS-------------GDSEVISL 80
            CSYRSFEIANATIFPTEGLSM+RYVSKTSLMIAKTMIKS             GDSEVISL
Sbjct: 934  CSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISL 993

Query: 81   PKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKEERISIPHLSETFKLGELLFD 140
            PKAKEKFGLGYKPVTSEWEKVRAK KE+R+ALLMGCEMKEERISIPHLSETFKLGELLFD
Sbjct: 994  PKAKEKFGLGYKPVTSEWEKVRAKNKEKRSALLMGCEMKEERISIPHLSETFKLGELLFD 1053

Query: 141  THQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK 183
            THQRKRHNEDSEISI VVSEN SLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK
Sbjct: 1054 THQRKRHNEDSEISIEVVSENTSLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK 1108

[Close]

BLAST of IVF0024424 vs. ExPASy TrEMBL
Match: A0A5A7UA36 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00210 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 136/180 (75.56%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSG 60
           MFVTKTS LPYVEA EEALECSYRSFEIANATIFPT                       G
Sbjct: 181 MFVTKTSTLPYVEAIEEALECSYRSFEIANATIFPTGD-------------------NQG 240

Query: 61  DSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKEERISIPHLSETFK 120
           DSEVISL KAKEKFGLGYKP+ SEWEKVR KKKE+R+ALL+G EMKEERISIPHLSETFK
Sbjct: 241 DSEVISLSKAKEKFGLGYKPIASEWEKVRTKKKEKRSALLVGREMKEERISIPHLSETFK 300

Query: 121 LGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGS 180
             ELLFDT QRKR   DSEISI VVSEN  LPHPLVH+CPPGFELNNWEIKKTL+VTKGS
Sbjct: 301 PRELLFDTDQRKRRKGDSEISIVVVSENTILPHPLVHQCPPGFELNNWEIKKTLEVTKGS 341

[Close]

BLAST of IVF0024424 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 343 bits (879), Expect = 1.12e-107
Identity = 177/195 (90.77%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1    MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSG 60
            MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSM+RYVSKTSLMIAKTMIKSG
Sbjct: 945  MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 1004

Query: 61   -------------DSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                         DSEVISLPKAKE FGLGYKPVTSEWEKVRAKKKE+R+ALLMGCEMKE
Sbjct: 1005 FQMHKGLGKDNQGDSEVISLPKAKENFGLGYKPVTSEWEKVRAKKKEKRSALLMGCEMKE 1064

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
            ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN
Sbjct: 1065 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 1124

Query: 181  WEIKKTLKVTKGSQK 182
            WEIKK+LKVTKGSQK
Sbjct: 1125 WEIKKSLKVTKGSQK 1139

[Close]

BLAST of IVF0024424 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 335 bits (860), Expect = 6.54e-103
Identity = 175/195 (89.74%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1    MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSG 60
            MFVTKTSVLPYVEATEEALECSYRSFE ANATIFPTEGLSM+RYVSKTSLMIAKTMIKSG
Sbjct: 1403 MFVTKTSVLPYVEATEEALECSYRSFEFANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 1462

Query: 61   -------------DSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                         DSEVISLPKAKEKFGLGYKPVTSE EKVRAKKKE+R+ALLMGCEMKE
Sbjct: 1463 FQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSECEKVRAKKKEKRSALLMGCEMKE 1522

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
            ERISIPHLSETFKLGELLFDTHQRKRHNEDSEI IAVVSEN SLPHPLVHKCPPGFELNN
Sbjct: 1523 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEILIAVVSENTSLPHPLVHKCPPGFELNN 1582

Query: 181  WEIKKTLKVTKGSQK 182
            WEIKKTLKVTKGSQK
Sbjct: 1583 WEIKKTLKVTKGSQK 1597

[Close]

BLAST of IVF0024424 vs. NCBI nr
Match: KAA0043020.1 (uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (794), Expect = 8.79e-100
Identity = 162/195 (83.08%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKS- 60
           MFVTK S LPYVEATEEALECSYRSFEIANATIFP EGLSM+RYVSKTSLMIAKTMIKS 
Sbjct: 317 MFVTKISTLPYVEATEEALECSYRSFEIANATIFPIEGLSMDRYVSKTSLMIAKTMIKSC 376

Query: 61  ------------GDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKE 120
                       GDS+VISLPKAKEKFGLGYKP  SEWEKVRAKKKE+R+ LL+GCEMKE
Sbjct: 377 FQMHKGLGKDNQGDSKVISLPKAKEKFGLGYKPAASEWEKVRAKKKEKRSTLLVGCEMKE 436

Query: 121 ERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNN 180
           ERISIPHL ETFK  ELLFDT+QRKR NEDSEISIAVVSEN SL HPLVH+CPPGFELNN
Sbjct: 437 ERISIPHLFETFKPEELLFDTNQRKRRNEDSEISIAVVSENTSLSHPLVHQCPPGFELNN 496

Query: 181 WEIKKTLKVTKGSQK 182
           WEIKKTL+VTKGSQK
Sbjct: 497 WEIKKTLEVTKGSQK 511

[Close]

BLAST of IVF0024424 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (776), Expect = 1.12e-91
Identity = 156/175 (89.14%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 21   CSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSG-------------DSEVISL 80
            CSYRSFEIANATIFPTEGLSM+RYVSKTSLMIAKTMIKSG             DSEVISL
Sbjct: 934  CSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISL 993

Query: 81   PKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKEERISIPHLSETFKLGELLFD 140
            PKAKEKFGLGYKPVTSEWEKVRAK KE+R+ALLMGCEMKEERISIPHLSETFKLGELLFD
Sbjct: 994  PKAKEKFGLGYKPVTSEWEKVRAKNKEKRSALLMGCEMKEERISIPHLSETFKLGELLFD 1053

Query: 141  THQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK 182
            THQRKRHNEDSEISI VVSEN SLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK
Sbjct: 1054 THQRKRHNEDSEISIEVVSENTSLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQK 1108

[Close]

BLAST of IVF0024424 vs. NCBI nr
Match: KAA0052108.1 (uncharacterized protein E6C27_scaffold578G00960 [Cucumis melo var. makuwa] >TYJ98088.1 uncharacterized protein E5676_scaffold565G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (654), Expect = 8.08e-78
Identity = 136/180 (75.56%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMNRYVSKTSLMIAKTMIKSG 60
           MFVTKTS LPYVEA EEALECSYRSFEIANATIFPT                       G
Sbjct: 181 MFVTKTSTLPYVEAIEEALECSYRSFEIANATIFPTGD-------------------NQG 240

Query: 61  DSEVISLPKAKEKFGLGYKPVTSEWEKVRAKKKERRNALLMGCEMKEERISIPHLSETFK 120
           DSEVISL KAKEKFGLGYKP+ SEWEKVR KKKE+R+ALL+G EMKEERISIPHLSETFK
Sbjct: 241 DSEVISLSKAKEKFGLGYKPIASEWEKVRTKKKEKRSALLVGREMKEERISIPHLSETFK 300

Query: 121 LGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGS 180
             ELLFDT QRKR   DSEISI VVSEN  LPHPLVH+CPPGFELNNWEIKKTL+VTKGS
Sbjct: 301 PRELLFDTDQRKRRKGDSEISIVVVSENTILPHPLVHQCPPGFELNNWEIKKTLEVTKGS 341

The following BLAST results are available for this feature:

BLAST of IVF0024424 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0024424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V681	2.3e-91	90.77	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SUT0	3.7e-89	89.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7TI68	1.6e-81	83.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VAU5	1.2e-79	89.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UA36	1.3e-65	75.56	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of IVF0024424 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061241.1	1.12e-107	90.77	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	6.54e-103	89.74	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0043020.1	8.79e-100	83.08	uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]	[more]
KAA0065293.1	1.12e-91	89.14	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]
KAA0052108.1	8.08e-78	75.56	uncharacterized protein E6C27_scaffold578G00960 [Cucumis melo var. makuwa] >TYJ9...	[more]

BLAST of IVF0024424 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 3..102
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024424.1	IVF0024424.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity