IVF0024226 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAATTCCCACATTGAAATAACCAGAAAACTCAAACTTTTTTTGTTTTTTACTATTTTCTATCCAAAATAAAATAGTTTGTATCCCAAACACAATAAGCTATCATAAATGATACAATCACTCCTTCACCCTTAGAGAAAGTCATTTTCAAACAACTAGATGATACATAATTTTTTTACTTTTACAGATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGGTGTCTTTCTTAGCATCGATGAGTTTGATGTTGATGATCGTTAGCCGATTTCTGTTACAAAATAGGATTTGTAGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGTATTTGCTTGGAGTTAAAATGGTTAACCTCATGTCATTTAGTGATTATATAGAGATCAATCCATATGACAATGCATTTCCTGAAACAATTATGTGTTGTCTTGGGGTGGTTGGAATGGTTGGCTTATGGCAACTTACTCACTTTCTCAAGTCCTTATTTCACATTTTCACCTCTAAGCTCAAATCTCTCGCAACTTCAAGGTAA TTGAAATTCCCACATTGAAATAACCAGAAAACTCAAACTTTTTTTGTTTTTTACTATTTTCTATCCAAAATAAAATAGTTTGTATCCCAAACACAATAAGCTATCATAAATGATACAATCACTCCTTCACCCTTAGAGAAAGTCATTTTCAAACAACTAGATGATACATAATTTTTTTACTTTTACAGATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGGTGTCTTTCTTAGCATCGATGAGTTTGATGTTGATGATCGTTAGCCGATTTCTGTTACAAAATAGGATTTGTAGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGTATTTGCTTGGAGTTAAAATGGTTAACCTCATGTCATTTAGTGATTATATAGAGATCAATCCATATGACAATGCATTTCCTGAAACAATTATGTGTTGTCTTGGGGTGGTTGGAATGGTTGGCTTATGGCAACTTACTCACTTTCTCAAGTCCTTATTTCACATTTTCACCTCTAAGCTCAAATCTCTCGCAACTTCAAGGTAA ATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGGTGTCTTTCTTAGCATCGATGAGTTTGATGTTGATGATCGTTAGCCGATTTCTGTTACAAAATAGGATTTGTAGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGTATTTGCTTGGAGTTAAAATGGTTAACCTCATGTCATTTAGTGATTATATAGAGATCAATCCATATGACAATGCATTTCCTGAAACAATTATGTGTTGTCTTGGGGTGGTTGGAATGGTTGGCTTATGGCAACTTACTCACTTTCTCAAGTCCTTATTTCACATTTTCACCTCTAAGCTCAAATCTCTCGCAACTTCAAGGTAA MVGYFLTIPEIKTRAFIDDRSASSNNTKESVKSRKFTKRRNSKRKRRESMALYTKKTTGQWKIWRKKNLKYKGNWIEEVQVTMMLVATVIATVTFQAGVNHPGGVWQQDTSFSYTSFEKNSTHTGMGLYSSLSDYNNRTVVLPAGTSIMVYQQEEEYWIYLWINTVSFLASMSLMLMIVSRFLLQNRICSCLLTLATCIAVVSLAIGYLLGVKMVNLMSFSDYIEINPYDNAFPETIMCCLGVVGMVGLWQLTHFLKSLFHIFTSKLKSLATSR Homology
BLAST of IVF0024226 vs. ExPASy TrEMBL
Match: A0A1S4E4H3 (uncharacterized protein LOC107992044 OS=Cucumis melo OX=3656 GN=LOC107992044 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 7.6e-147 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of IVF0024226 vs. ExPASy TrEMBL
Match: A0A5D3BCC9 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00020 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.2e-121 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of IVF0024226 vs. ExPASy TrEMBL
Match: A0A0A0LCQ0 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G847090 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 1.0e-74 Identity = 164/279 (58.78%), Postives = 207/279 (74.19%), Query Frame = 0
BLAST of IVF0024226 vs. ExPASy TrEMBL
Match: A0A1S4E4G3 (uncharacterized protein LOC107992042 OS=Cucumis melo OX=3656 GN=LOC107992042 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65 Identity = 146/281 (51.96%), Postives = 187/281 (66.55%), Query Frame = 0
BLAST of IVF0024226 vs. ExPASy TrEMBL
Match: A0A1S3BIS1 (uncharacterized protein LOC103490026 OS=Cucumis melo OX=3656 GN=LOC103490026 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64 Identity = 162/282 (57.45%), Postives = 199/282 (70.57%), Query Frame = 0
BLAST of IVF0024226 vs. NCBI nr
Match: XP_016903124.1 (PREDICTED: uncharacterized protein LOC107992044 [Cucumis melo]) HSP 1 Score: 531 bits (1367), Expect = 9.92e-190 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of IVF0024226 vs. NCBI nr
Match: KAA0058428.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYJ96689.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 443 bits (1140), Expect = 5.27e-156 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of IVF0024226 vs. NCBI nr
Match: XP_004141217.1 (uncharacterized protein LOC101204214 [Cucumis sativus] >KGN59795.1 hypothetical protein Csa_002073 [Cucumis sativus]) HSP 1 Score: 291 bits (745), Expect = 3.91e-92 Identity = 165/284 (58.10%), Postives = 209/284 (73.59%), Query Frame = 0
BLAST of IVF0024226 vs. NCBI nr
Match: XP_016903123.1 (PREDICTED: uncharacterized protein LOC107992042 [Cucumis melo]) HSP 1 Score: 260 bits (665), Expect = 3.37e-83 Identity = 147/282 (52.13%), Postives = 189/282 (67.02%), Query Frame = 0
BLAST of IVF0024226 vs. NCBI nr
Match: XP_008447612.1 (PREDICTED: uncharacterized protein LOC103490026 [Cucumis melo]) HSP 1 Score: 257 bits (656), Expect = 1.39e-78 Identity = 163/282 (57.80%), Postives = 198/282 (70.21%), Query Frame = 0
BLAST of IVF0024226 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 7.0e-12 Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 0
BLAST of IVF0024226 vs. TAIR 10
Match: AT4G13266.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08 Identity = 44/165 (26.67%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of IVF0024226 vs. TAIR 10
Match: AT5G51160.1 (Ankyrin repeat family protein ) HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04 Identity = 30/118 (25.42%), Postives = 59/118 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|