IVF0024201 (gene) Melon (IVF77) v1

Overview


Name	IVF0024201
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	U-box domain-containing protein 26
Location	chr04: 1191573 .. 1192746 (-)
RNA-Seq Expression	IVF0024201
Synteny	IVF0024201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCACACACACAAACACCATACATACCCTCATCTCTCTGTTTTCAACAATTTTGAAAAAACGCCATGAGAACTCACCAACCAAAGCTTAAAACTCAACTCTTCTCTTGCGGATTCTTCCGCCATTGTACTCGCTCTGTCTTAAGCCCCACCGCCTCTCATTCCCCTGCTCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCACCACCACCACCGCCGCCGCCCTCCCGCCGTCCACCCCTTCCCGATTCCGAATCCTCTTCCTCCTCTGCTTCTCAAAGCTTCACTCAATGGAGATTCCCACTTCCACATTCACCCATTTTTACACAACAACCTTCAATTTCAGACCCTCCTTCTACTTTCTCCATTCCCCTTCCGATCCTCTCCCCCCACCCATCTCTGCATCAGCCCTACAAGAAATCCTCCAAGTTGCACAGCTCCAACTCTGTTCCGCTTCAGATTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCAAACCCATCTCTAGACTCCGACTGTACTCCCGAATTGATGCGCGGTTTAATCGAAAGTTTCAACATTAAAACCGGTTCCAAACCGGCCACCAAAATTCTATTGGCACTTTGTTTGGCAGAGGGTAATCGTCACGTTGCAGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCTCTGCCAGAGATGGAAGACGCGGCTGCCGAGCGAGCACTTGCGTCGCTCGAACTTATGTGTACGGTTGCTGAAGGAGCAGCAGAGGTTAGAGCTCACGCTCTTTCGGTGCCAGCTATGGTTACAATGATGGGAAGAATGGCAGCTAGAGGGAAGGAATCGGCCATAAGTGTGCTTGGGGTTATTTACGACAATGGGGTCTCGTCGGAAGCTAAGTCCGCAGTGACGGCGCCGCCAGAGGAGGTTGCGCGTGCGGTTGTTTTAGCGCTGCAGGGTGATAGTAGTGTGAGGGGAAGAAGAAAAGGGGCGAGACTTCTTAAGACACTGCAAGAGCAGCAAGACGAATTCTTCACTGCAGCCCTATAGATCCGGCGACTGTGGTCGGCCGGAGTTGATCGTTGAAGTGTGTTTAGTGTTAACCAATCCATAATTTTGAGATGACTAATACAGTTTGAATGGTTTTTGGTTAGACAAATAATTCAACTCTTATGGGG

mRNA sequence

ATTTCACACACACAAACACCATACATACCCTCATCTCTCTGTTTTCAACAATTTTGAAAAAACGCCATGAGAACTCACCAACCAAAGCTTAAAACTCAACTCTTCTCTTGCGGATTCTTCCGCCATTGTACTCGCTCTGTCTTAAGCCCCACCGCCTCTCATTCCCCTGCTCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCACCACCACCACCGCCGCCGCCCTCCCGCCGTCCACCCCTTCCCGATTCCGAATCCTCTTCCTCCTCTGCTTCTCAAAGCTTCACTCAATGGAGATTCCCACTTCCACATTCACCCATTTTTACACAACAACCTTCAATTTCAGACCCTCCTTCTACTTTCTCCATTCCCCTTCCGATCCTCTCCCCCCACCCATCTCTGCATCAGCCCTACAAGAAATCCTCCAAGTTGCACAGCTCCAACTCTGTTCCGCTTCAGATTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCAAACCCATCTCTAGACTCCGACTGTACTCCCGAATTGATGCGCGGTTTAATCGAAAGTTTCAACATTAAAACCGGTTCCAAACCGGCCACCAAAATTCTATTGGCACTTTGTTTGGCAGAGGGTAATCGTCACGTTGCAGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCTCTGCCAGAGATGGAAGACGCGGCTGCCGAGCGAGCACTTGCGTCGCTCGAACTTATGTGTACGGTTGCTGAAGGAGCAGCAGAGGTTAGAGCTCACGCTCTTTCGGTGCCAGCTATGGTTACAATGATGGGAAGAATGGCAGCTAGAGGGAAGGAATCGGCCATAAGTGTGCTTGGGGTTATTTACGACAATGGGGTCTCGTCGGAAGCTAAGTCCGCAGTGACGGCGCCGCCAGAGGAGGTTGCGCGTGCGGTTGTTTTAGCGCTGCAGGGTGATAGTAGTGTGAGGGGAAGAAGAAAAGGGGCGAGACTTCTTAAGACACTGCAAGAGCAGCAAGACGAATTCTTCACTGCAGCCCTATAGATCCGGCGACTGTGGTCGGCCGGAGTTGATCGTTGAAGTGTGTTTAGTGTTAACCAATCCATAATTTTGAGATGACTAATACAGTTTGAATGGTTTTTGGTTAGACAAATAATTCAACTCTTATGGGG

Coding sequence (CDS)

ATGGAGATTCCCACTTCCACATTCACCCATTTTTACACAACAACCTTCAATTTCAGACCCTCCTTCTACTTTCTCCATTCCCCTTCCGATCCTCTCCCCCCACCCATCTCTGCATCAGCCCTACAAGAAATCCTCCAAGTTGCACAGCTCCAACTCTGTTCCGCTTCAGATTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCAAACCCATCTCTAGACTCCGACTGTACTCCCGAATTGATGCGCGGTTTAATCGAAAGTTTCAACATTAAAACCGGTTCCAAACCGGCCACCAAAATTCTATTGGCACTTTGTTTGGCAGAGGGTAATCGTCACGTTGCAGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCTCTGCCAGAGATGGAAGACGCGGCTGCCGAGCGAGCACTTGCGTCGCTCGAACTTATGTGTACGGTTGCTGAAGGAGCAGCAGAGGTTAGAGCTCACGCTCTTTCGGTGCCAGCTATGGTTACAATGATGGGAAGAATGGCAGCTAGAGGGAAGGAATCGGCCATAAGTGTGCTTGGGGTTATTTACGACAATGGGGTCTCGTCGGAAGCTAAGTCCGCAGTGACGGCGCCGCCAGAGGAGGTTGCGCGTGCGGTTGTTTTAGCGCTGCAGGGTGATAGTAGTGTGAGGGGAAGAAGAAAAGGGGCGAGACTTCTTAAGACACTGCAAGAGCAGCAAGACGAATTCTTCACTGCAGCCCTATAG

Protein sequence

MEIPTSTFTHFYTTTFNFRPSFYFLHSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL

Homology

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BLAST of IVF0024201 vs. ExPASy Swiss-Prot
Match: Q9FXA4 (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.1e-11
Identity = 61/199 (30.65%), Postives = 99/199 (49.75%), Query Frame = 0


Query: 52  LCSASDSDRLAALQLLERSLVPNPSLDSDC----TPELMRGLIESFNIKTGSKPATKI-- 111
           L  +S   R+ A  L+E  L    S+D       +  +  G+++       S+ A KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 112 --LLALCLAEGNRHVAVEAGAVGAVIESL-PEMEDAAAERALASLELMCTVAEGAAEVRA 171
             + ALCL +  RH+A+ AGA G +I+ L  + +    ER LA++EL+C + EG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 172 HALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVVLALQG 231
           HAL+VP MV  + R++ R  E A   L  +     ++E +    A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 232 DSSVRGRRKGARLLKTLQE 242
           D + R +RK   LLK L++
Sbjct: 386 DCTERAKRKAQMLLKLLRD 400

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BLAST of IVF0024201 vs. ExPASy Swiss-Prot
Match: Q9LT79 (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 84  ELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESL-PEMEDAAAER 143
           +L+R  I S   +   K   K L ALC  +  RH+A+ AGA   +I+ L  + +    ER
Sbjct: 247 DLLRNPISS---RRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 306

Query: 144 ALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAK 203
           ALA++EL+C   EG A    HAL+VP +V  + R++ R  E A   L  +     ++E +
Sbjct: 307 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEER 366

Query: 204 SAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEF 247
               A    V   ++L +Q + + R ++K  +LLK L++   ++
Sbjct: 367 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDY 403

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BLAST of IVF0024201 vs. ExPASy Swiss-Prot
Match: Q84TG3 (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 60  RLAALQLLERSL-VPNPSLDSDCTPELMRGLIESFN---IKTGSKPATKILLALCLAEGN 119
           R+ A  LL+  L V +P       PE+   +++  +    +  +K A  IL+ +C    N
Sbjct: 206 RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRN 265

Query: 120 RHVAVEAGAVGAVIESLPE----MEDAAAERALASLELMCTVAEGAAEVRAHALSVPAMV 179
           RH AVEAG +  +IE L +     E    E A+  L+L+C  AEG AE   H  ++  + 
Sbjct: 266 RHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVC 325

Query: 180 TMMGRMAARGKESAISVL 190
             + R++    + A+ VL
Sbjct: 326 KKILRVSQTASDRAVRVL 343

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BLAST of IVF0024201 vs. ExPASy TrEMBL
Match: A0A5A7T6P9 (U-box domain-containing protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004980 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 8.0e-111
Identity = 226/232 (97.41%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 20  PSFYFLHSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 79
           P   F   PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS
Sbjct: 95  PPSTFSIPPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 154

Query: 80  DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 139
           DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA
Sbjct: 155 DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 214

Query: 140 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 199
           AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS
Sbjct: 215 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 274

Query: 200 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 252
           EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL
Sbjct: 275 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 326

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BLAST of IVF0024201 vs. ExPASy TrEMBL
Match: A0A1S3CQB5 (U-box domain-containing protein 26 OS=Cucumis melo OX=3656 GN=LOC103503597 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 8.0e-111
Identity = 226/232 (97.41%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 20  PSFYFLHSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 79
           P   F   PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS
Sbjct: 95  PPSTFSIPPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 154

Query: 80  DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 139
           DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA
Sbjct: 155 DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 214

Query: 140 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 199
           AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS
Sbjct: 215 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 274

Query: 200 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 252
           EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL
Sbjct: 275 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 326

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BLAST of IVF0024201 vs. ExPASy TrEMBL
Match: A0A0A0LEW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895740 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.2e-104
Identity = 217/233 (93.13%), Postives = 222/233 (95.28%), Query Frame = 0


Query: 20  PSFYFLHSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 79
           P   F   P DPLPPPISASAL+EILQVA+LQL SASDSDRLAALQLLERSLVPNPSLDS
Sbjct: 92  PPSTFSIPPPDPLPPPISASALKEILQVAELQLSSASDSDRLAALQLLERSLVPNPSLDS 151

Query: 80  DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 139
           DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA
Sbjct: 152 DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 211

Query: 140 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 199
           AERALASLELMCTVAEGAAEVR+HALSVPAMVTMMGRMAARGKESAISVLGVI+D+GVSS
Sbjct: 212 AERALASLELMCTVAEGAAEVRSHALSVPAMVTMMGRMAARGKESAISVLGVIFDSGVSS 271

Query: 200 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQ-DEFFTAAL 252
           EAKS VTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQ DEF TAAL
Sbjct: 272 EAKSGVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQADEFSTAAL 324

[Close]

BLAST of IVF0024201 vs. ExPASy TrEMBL
Match: A0A6J1C9H2 (U-box domain-containing protein 26 OS=Momordica charantia OX=3673 GN=LOC111009618 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.5e-93
Identity = 193/225 (85.78%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 20  PSFYFLHSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDS 79
           P   F   PS P PPPISA  L+EIL VA+LQL S SD+DRLAALQLLERSLVP+PSLD 
Sbjct: 98  PPSNFSIPPSGPPPPPISAENLKEILHVAELQLSSGSDADRLAALQLLERSLVPDPSLDP 157

Query: 80  DCTPELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAA 139
           DCTPELMRGL+ + + KTGSKPATKILLALCLAEGNRH+AVE+GAVGAVIESLPEMED A
Sbjct: 158 DCTPELMRGLMANLSSKTGSKPATKILLALCLAEGNRHIAVESGAVGAVIESLPEMEDVA 217

Query: 140 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSS 199
           AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVI+DNGVSS
Sbjct: 218 AERALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIFDNGVSS 277

Query: 200 EAKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQD 245
           +A+SAVTAPPEEVARAVVLALQGDSS RGRRKGARLLK LQEQQD
Sbjct: 278 DAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALQEQQD 322

[Close]

BLAST of IVF0024201 vs. ExPASy TrEMBL
Match: A0A6J1IJ47 (U-box domain-containing protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111476752 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.2e-91
Identity = 189/223 (84.75%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 29  SDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRG 88
           S P PP ISA+ L+EIL +A+LQLCSASDSDRLAALQLLERSLVP+PSLD DCTPELMRG
Sbjct: 96  SIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRG 155

Query: 89  LIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLE 148
           +I + N KTGSKP+TKILLALCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLE
Sbjct: 156 IIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLE 215

Query: 149 LMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAP 208
           LMCTV EGAAEVRAHALSVPAMV MMGRMAARGKESAISVLGVI+DNGVS EA+SAVTAP
Sbjct: 216 LMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAP 275

Query: 209 PEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 252
           PEEVARAVVLALQGDSS RGRRKGARLLK L+EQQ+   TA +
Sbjct: 276 PEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSSTAGV 318

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BLAST of IVF0024201 vs. NCBI nr
Match: XP_008466051.1 (PREDICTED: U-box domain-containing protein 26 [Cucumis melo] >KAA0038613.1 U-box domain-containing protein 26 [Cucumis melo var. makuwa] >TYK31212.1 U-box domain-containing protein 26 [Cucumis melo var. makuwa])

HSP 1 Score: 413 bits (1061), Expect = 8.41e-143
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 28  PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 87
           PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR
Sbjct: 103 PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 162

Query: 88  GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 147
           GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL
Sbjct: 163 GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 222

Query: 148 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA 207
           ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA
Sbjct: 223 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA 282

Query: 208 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 251
           PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL
Sbjct: 283 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 326

[Close]

BLAST of IVF0024201 vs. NCBI nr
Match: XP_004136217.1 (U-box domain-containing protein 26 [Cucumis sativus] >KGN60328.1 hypothetical protein Csa_001353 [Cucumis sativus])

HSP 1 Score: 390 bits (1003), Expect = 5.22e-134
Identity = 215/225 (95.56%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 28  PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 87
           P DPLPPPISASAL+EILQVA+LQL SASDSDRLAALQLLERSLVPNPSLDSDCTPELMR
Sbjct: 100 PPDPLPPPISASALKEILQVAELQLSSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 159

Query: 88  GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 147
           GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL
Sbjct: 160 GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 219

Query: 148 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA 207
           ELMCTVAEGAAEVR+HALSVPAMVTMMGRMAARGKESAISVLGVI+D+GVSSEAKS VTA
Sbjct: 220 ELMCTVAEGAAEVRSHALSVPAMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTA 279

Query: 208 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQ-DEFFTAAL 251
           PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQ DEF TAAL
Sbjct: 280 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQADEFSTAAL 324

[Close]

BLAST of IVF0024201 vs. NCBI nr
Match: XP_038897160.1 (U-box domain-containing protein 26 [Benincasa hispida])

HSP 1 Score: 387 bits (993), Expect = 1.79e-132
Identity = 211/224 (94.20%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 28  PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 87
           PSDPLPPPISA+AL+EILQVA+LQLCSAS SDRLAALQLLERSLVPNPSLD DCTPELMR
Sbjct: 101 PSDPLPPPISAAALKEILQVAELQLCSASYSDRLAALQLLERSLVPNPSLDPDCTPELMR 160

Query: 88  GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 147
           GLIESFNIKTGSKPATKILLALCLAEGNRH+AVEAGAVGAVIESLPEMEDAAAERALASL
Sbjct: 161 GLIESFNIKTGSKPATKILLALCLAEGNRHIAVEAGAVGAVIESLPEMEDAAAERALASL 220

Query: 148 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA 207
           ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVI+DN VSSEAKSAVTA
Sbjct: 221 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIFDNEVSSEAKSAVTA 280

Query: 208 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 251
           PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQD   T A+
Sbjct: 281 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDGCSTEAV 324

[Close]

BLAST of IVF0024201 vs. NCBI nr
Match: XP_022138450.1 (U-box domain-containing protein 26 [Momordica charantia])

HSP 1 Score: 353 bits (907), Expect = 2.35e-119
Identity = 191/217 (88.02%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 28  PSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMR 87
           PS P PPPISA  L+EIL VA+LQL S SD+DRLAALQLLERSLVP+PSLD DCTPELMR
Sbjct: 106 PSGPPPPPISAENLKEILHVAELQLSSGSDADRLAALQLLERSLVPDPSLDPDCTPELMR 165

Query: 88  GLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASL 147
           GL+ + + KTGSKPATKILLALCLAEGNRH+AVE+GAVGAVIESLPEMED AAERALASL
Sbjct: 166 GLMANLSSKTGSKPATKILLALCLAEGNRHIAVESGAVGAVIESLPEMEDVAAERALASL 225

Query: 148 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTA 207
           ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVI+DNGVSS+A+SAVTA
Sbjct: 226 ELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIFDNGVSSDAESAVTA 285

Query: 208 PPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQD 244
           PPEEVARAVVLALQGDSS RGRRKGARLLK LQEQQD
Sbjct: 286 PPEEVARAVVLALQGDSSARGRRKGARLLKALQEQQD 322

[Close]

BLAST of IVF0024201 vs. NCBI nr
Match: XP_022976320.1 (U-box domain-containing protein 26 [Cucurbita maxima])

HSP 1 Score: 347 bits (891), Expect = 6.12e-117
Identity = 189/223 (84.75%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 29  SDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRG 88
           S P PP ISA+ L+EIL +A+LQLCSASDSDRLAALQLLERSLVP+PSLD DCTPELMRG
Sbjct: 96  SIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRG 155

Query: 89  LIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLE 148
           +I + N KTGSKP+TKILLALCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLE
Sbjct: 156 IIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLE 215

Query: 149 LMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAP 208
           LMCTV EGAAEVRAHALSVPAMV MMGRMAARGKESAISVLGVI+DNGVS EA+SAVTAP
Sbjct: 216 LMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAP 275

Query: 209 PEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEFFTAAL 251
           PEEVARAVVLALQGDSS RGRRKGARLLK L+EQQ+   TA +
Sbjct: 276 PEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSSTAGV 318

[Close]

BLAST of IVF0024201 vs. TAIR 10
Match: AT5G11550.1 (ARM repeat superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-58
Identity = 130/221 (58.82%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 26  HSPSDPLPPPISASALQEILQVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPEL 85
           H P  P P P++ + LQE  Q+A+L L S S+SD+L ALQLLER +VP+P  D  C P L
Sbjct: 84  HPPPPPPPLPVT-TTLQETFQIAELHLTSVSESDKLLALQLLERVVVPDPPSDPTCPPGL 143

Query: 86  MRGLI---ESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAER 145
           MRGL+    S N    +K  TKILLALCLAEGNRHVAVEAGA  AV+E+   +E +A ER
Sbjct: 144 MRGLVSCLRSNNKIVTAKYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAVER 203

Query: 146 ALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNG--VSSE 205
           ALA+LELMCT AEGAAEVRAHA++VPAMV +M R+A RG+E AIS+L V+Y  G      
Sbjct: 204 ALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYAISILSVVYGKGGEGGDS 263

Query: 206 AKSAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQE 242
            +    AP EEVARAV LAL+G+ + RG+RKGA+LLKTL+E
Sbjct: 264 GEEIAVAPAEEVARAVALALEGECTARGKRKGAQLLKTLEE 303

[Close]

BLAST of IVF0024201 vs. TAIR 10
Match: AT1G49780.1 (plant U-box 26 )

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-12
Identity = 61/199 (30.65%), Postives = 99/199 (49.75%), Query Frame = 0


Query: 52  LCSASDSDRLAALQLLERSLVPNPSLDSDC----TPELMRGLIESFNIKTGSKPATKI-- 111
           L  +S   R+ A  L+E  L    S+D       +  +  G+++       S+ A KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 112 --LLALCLAEGNRHVAVEAGAVGAVIESL-PEMEDAAAERALASLELMCTVAEGAAEVRA 171
             + ALCL +  RH+A+ AGA G +I+ L  + +    ER LA++EL+C + EG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 172 HALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVVLALQG 231
           HAL+VP MV  + R++ R  E A   L  +     ++E +    A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 232 DSSVRGRRKGARLLKTLQE 242
           D + R +RK   LLK L++
Sbjct: 386 DCTERAKRKAQMLLKLLRD 400

[Close]

BLAST of IVF0024201 vs. TAIR 10
Match: AT3G19380.1 (plant U-box 25 )

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 84  ELMRGLIESFNIKTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESL-PEMEDAAAER 143
           +L+R  I S   +   K   K L ALC  +  RH+A+ AGA   +I+ L  + +    ER
Sbjct: 247 DLLRNPISS---RRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 306

Query: 144 ALASLELMCTVAEGAAEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAK 203
           ALA++EL+C   EG A    HAL+VP +V  + R++ R  E A   L  +     ++E +
Sbjct: 307 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEER 366

Query: 204 SAVTAPPEEVARAVVLALQGDSSVRGRRKGARLLKTLQEQQDEF 247
               A    V   ++L +Q + + R ++K  +LLK L++   ++
Sbjct: 367 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDY 403

[Close]

BLAST of IVF0024201 vs. TAIR 10
Match: AT2G35930.1 (plant U-box 23 )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 60  RLAALQLLERSL-VPNPSLDSDCTPELMRGLIESFN---IKTGSKPATKILLALCLAEGN 119
           R+ A  LL+  L V +P       PE+   +++  +    +  +K A  IL+ +C    N
Sbjct: 206 RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRN 265

Query: 120 RHVAVEAGAVGAVIESLPE----MEDAAAERALASLELMCTVAEGAAEVRAHALSVPAMV 179
           RH AVEAG +  +IE L +     E    E A+  L+L+C  AEG AE   H  ++  + 
Sbjct: 266 RHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVC 325

Query: 180 TMMGRMAARGKESAISVL 190
             + R++    + A+ VL
Sbjct: 326 KKILRVSQTASDRAVRVL 343

[Close]

BLAST of IVF0024201 vs. TAIR 10
Match: AT4G16490.1 (ARM repeat superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 43/148 (29.05%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 98  GSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGA 157
           G K A   L  LC  + N+  AV AGAV  +++ + E     AE+A+  L  +  + +G 
Sbjct: 323 GKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDG- 382

Query: 158 AEVRAHALSVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVV 217
            E       + A+V  +   + +GKE AI  L  +  + V +     +      +   V 
Sbjct: 383 KEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNR---GLLVREGAIPPLVG 442

Query: 218 LALQGDSSVRGRRKGARLLKTLQEQQDE 246
           L+  G  SVR +RK  RLL  L+E + E
Sbjct: 443 LSQSGSVSVRAKRKAERLLGYLREPRKE 466

The following BLAST results are available for this feature:

BLAST of IVF0024201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA4	4.1e-11	30.65	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]
Q9LT79	2.2e-09	31.10	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
Q84TG3	1.7e-04	29.71	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]

BLAST of IVF0024201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6P9	8.0e-111	97.41	U-box domain-containing protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CQB5	8.0e-111	97.41	U-box domain-containing protein 26 OS=Cucumis melo OX=3656 GN=LOC103503597 PE=4 ...	[more]
A0A0A0LEW4	4.2e-104	93.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895740 PE=4 SV=1	[more]
A0A6J1C9H2	7.5e-93	85.78	U-box domain-containing protein 26 OS=Momordica charantia OX=3673 GN=LOC11100961...	[more]
A0A6J1IJ47	3.2e-91	84.75	U-box domain-containing protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111476752 P...	[more]

BLAST of IVF0024201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466051.1	8.41e-143	100.00	PREDICTED: U-box domain-containing protein 26 [Cucumis melo] >KAA0038613.1 U-box...	[more]
XP_004136217.1	5.22e-134	95.56	U-box domain-containing protein 26 [Cucumis sativus] >KGN60328.1 hypothetical pr...	[more]
XP_038897160.1	1.79e-132	94.20	U-box domain-containing protein 26 [Benincasa hispida]	[more]
XP_022138450.1	2.35e-119	88.02	U-box domain-containing protein 26 [Momordica charantia]	[more]
XP_022976320.1	6.12e-117	84.75	U-box domain-containing protein 26 [Cucurbita maxima]	[more]

BLAST of IVF0024201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11550.1	3.5e-58	58.82	ARM repeat superfamily protein	[more]
AT1G49780.1	2.9e-12	30.65	plant U-box 26	[more]
AT3G19380.1	1.6e-10	31.10	plant U-box 25	[more]
AT2G35930.1	1.2e-05	29.71	plant U-box 23	[more]
AT4G16490.1	1.7e-04	29.05	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 39..249 e-value: 4.5E-5 score: 25.5
None	No IPR available	PANTHER	PTHR47873	ARM REPEAT SUPERFAMILY PROTEIN	coord: 29..244
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 42..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024201.1	IVF0024201.1	mRNA