IVF0023471 (gene) Melon (IVF77) v1

Overview


Name	IVF0023471
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S7, chloroplastic
Location	tig00000662: 55546 .. 56013 (+)
RNA-Seq Expression	IVF0023471
Synteny	IVF0023471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACATGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

mRNA sequence

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACATGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Coding sequence (CDS)

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACATGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Homology

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BLAST of IVF0023471 vs. ExPASy Swiss-Prot
Match: Q49KT8 (30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy Swiss-Prot
Match: B1NWJ5 (30S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

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BLAST of IVF0023471 vs. ExPASy Swiss-Prot
Match: P07135 (30S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 4.8e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy Swiss-Prot
Match: Q6EM99 (30S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.3e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy Swiss-Prot
Match: A4QJG0 (30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.2e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy TrEMBL
Match: A0A6M3RUB1 (30S ribosomal protein S7, chloroplastic OS=Trichosanthes rosthornii OX=676073 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy TrEMBL
Match: A0A249RYX2 (30S ribosomal protein S7, chloroplastic OS=Cucumis melo var. momordica OX=2034244 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy TrEMBL
Match: A0A343F2D8 (30S ribosomal protein S7, chloroplastic OS=Citrullus colocynthis OX=252529 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy TrEMBL
Match: A0A6H0ET47 (30S ribosomal protein S7, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. ExPASy TrEMBL
Match: A0A6H0ETM2 (30S ribosomal protein S7, chloroplastic OS=Ampelosycios humblotii OX=386639 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. NCBI nr
Match: WP_131767149.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae] >YP_004841829.1 ribosomal protein S7 [Cucumis melo subsp. melo] >YP_004841845.1 ribosomal protein S7 [Cucumis melo subsp. melo] >YP_009236323.1 ribosomal protein S7 [Gynostemma pentaphyllum] >YP_009236335.1 ribosomal protein S7 [Gynostemma pentaphyllum] >YP_009317431.1 ribosomal protein S7 [Coccinia grandis] >YP_009317445.1 ribosomal protein S7 [Coccinia grandis] >YP_009326035.1 ribosomal protein S7 [Citrullus lanatus] >YP_009326050.1 ribosomal protein S7 [Citrullus lanatus] >YP_009348077.1 ribosomal protein S7 [Citrullus mucosospermus] >YP_009348092.1 ribosomal protein S7 [Citrullus mucosospermus] >YP_009420840.1 ribosomal protein S7 [Citrullus colocynthis] >YP_009420855.1 ribosomal protein S7 [Citrullus colocynthis] >YP_009430672.1 ribosomal protein S7 [Gynostemma cardiospermum] >YP_009430688.1 ribosomal protein S7 [Gynostemma cardiospermum] >YP_009431602.1 ribosomal protein S7 [Citrullus amarus] >YP_009431617.1 ribosomal protein S7 [Citrullus amarus] >YP_009431688.1 ribosomal protein S7 [Citrullus rehmii] >YP_009431703.1 ribosomal protein S7 [Citrullus rehmii] >YP_009439849.1 ribosomal protein S7 [Gynostemma laxiflorum] >YP_009439865.1 ribosomal protein S7 [Gynostemma laxiflorum] >YP_009440023.1 ribosomal protein S7 [Gynostemma pentagynum] >YP_009440039.1 ribosomal protein S7 [Gynostemma pentagynum] >YP_009440202.1 ribosomal protein S7 [Gynostemma longipes] >YP_009440218.1 ribosomal protein S7 [Gynostemma longipes] >YP_009440289.1 ribosomal protein S7 [Gynostemma burmanicum (nom. inval.)] >YP_009440305.1 ribosomal protein S7 [Gynostemma burmanicum (nom. inval.)] >YP_009440376.1 ribosomal protein S7 [Gynostemma pubescens] >YP_009440392.1 ribosomal protein S7 [Gynostemma pubescens] >YP_009456106.1 ribosomal protein S7 [Momordica charantia] >YP_009456122.1 ribosomal protein S7 [Momordica charantia] >YP_009456191.1 ribosomal protein S7 [Lagenaria siceraria] >YP_009456207.1 ribosomal protein S7 [Lagenaria siceraria] >YP_009468906.1 ribosomal protein S7 [Gynostemma compressum] >YP_009468922.1 ribosomal protein S7 [Gynostemma compressum] >YP_009525231.1 ribosomal protein S7 [Hodgsonia macrocarpa] >YP_009525244.1 ribosomal protein S7 [Hodgsonia macrocarpa] >YP_009526347.1 ribosomal protein S7 [Hemsleya lijiangensis] >YP_009526363.1 ribosomal protein S7 [Hemsleya lijiangensis] >YP_009560881.1 ribosomal protein S7 [Trichosanthes kirilowii] >YP_009560894.1 ribosomal protein S7 [Trichosanthes kirilowii] >YP_009669949.1 ribosomal protein S7 [Salvertia convallariodora] >YP_009669965.1 ribosomal protein S7 [Salvertia convallariodora] >YP_009674436.1 ribosomal protein S7 [Siraitia grosvenorii] >YP_009674451.1 ribosomal protein S7 [Siraitia grosvenorii] >YP_009707934.1 ribosomal protein S7 [Begonia pulchrifolia] >YP_009707950.1 ribosomal protein S7 [Begonia pulchrifolia] >YP_009738248.1 ribosomal protein S7 [Siraitia siamensis] >YP_009738263.1 ribosomal protein S7 [Siraitia siamensis] >YP_009751530.1 ribosomal protein S7 [Thladiantha dubia] >YP_009751544.1 ribosomal protein S7 [Thladiantha dubia] >YP_009751698.1 ribosomal protein S7 [Hodgsonia heteroclita] >YP_009751712.1 ribosomal protein S7 [Hodgsonia heteroclita] >YP_009751783.1 ribosomal protein S7 [Herpetospermum pedunculosum] >YP_009751796.1 ribosomal protein S7 [Herpetospermum pedunculosum] >YP_009751867.1 ribosomal protein S7 [Indofevillea khasiana] >YP_009751880.1 ribosomal protein S7 [Indofevillea khasiana] >YP_009751951.1 ribosomal protein S7 [Cyclanthera pedata] >YP_009751964.1 ribosomal protein S7 [Cyclanthera pedata] >YP_009752120.1 ribosomal protein S7 [Dendrosicyos socotranus] >YP_009752133.1 ribosomal protein S7 [Dendrosicyos socotranus] >YP_009752203.1 ribosomal protein S7 [Linnaeosicyos amara] >YP_009752288.1 ribosomal protein S7 [Trichosanthes baviensis] >YP_009752301.1 ribosomal protein S7 [Trichosanthes baviensis] >YP_009752372.1 ribosomal protein S7 [Bryonia marmorata] >YP_009752386.1 ribosomal protein S7 [Bryonia marmorata] >YP_009752457.1 ribosomal protein S7 [Trichosanthes tricuspidata] >YP_009752470.1 ribosomal protein S7 [Trichosanthes tricuspidata] >YP_009752541.1 ribosomal protein S7 [Trichosanthes tubiflora] >YP_009752555.1 ribosomal protein S7 [Trichosanthes tubiflora] >YP_009752626.1 ribosomal protein S7 [Trichosanthes homophylla] >YP_009752640.1 ribosomal protein S7 [Trichosanthes homophylla] >YP_009752711.1 ribosomal protein S7 [Ampelosycios humblotii] >YP_009752724.1 ribosomal protein S7 [Ampelosycios humblotii] >YP_009752880.1 ribosomal protein S7 [Baijiania yunnanensis] >YP_009752894.1 ribosomal protein S7 [Baijiania yunnanensis] >YP_009752965.1 ribosomal protein S7 [Momordica sessilifolia] >YP_009752978.1 ribosomal protein S7 [Momordica sessilifolia] >YP_009753049.1 ribosomal protein S7 [Gerrardanthus macrorhizus] >YP_009753063.1 ribosomal protein S7 [Gerrardanthus macrorhizus] >YP_009753219.1 ribosomal protein S7 [Trichosanthes truncata] >YP_009753232.1 ribosomal protein S7 [Trichosanthes truncata] >YP_009753302.1 ribosomal protein S7 [Nothoalsomitra suberosa] >YP_009753316.1 ribosomal protein S7 [Nothoalsomitra suberosa] >YP_009753665.1 ribosomal protein S7 [Trichosanthes wallichiana] >YP_009753679.1 ribosomal protein S7 [Trichosanthes wallichiana] >YP_009753750.1 ribosomal protein S7 [Trichosanthes nervifolia] >YP_009753763.1 ribosomal protein S7 [Trichosanthes nervifolia] >YP_009753834.1 ribosomal protein S7 [Trichosanthes pilosa] >YP_009753848.1 ribosomal protein S7 [Trichosanthes pilosa] >YP_009753919.1 ribosomal protein S7 [Trichosanthes lobata] >YP_009753933.1 ribosomal protein S7 [Trichosanthes lobata] >YP_009775179.1 ribosomal protein S7 [Begonia versicolor] >YP_009775192.1 ribosomal protein S7 [Begonia versicolor] >YP_009860119.1 ribosomal protein S7 [Cucumis melo subsp. agrestis] >YP_009860135.1 ribosomal protein S7 [Cucumis melo subsp. agrestis] >YP_009945460.1 ribosomal protein S7 [Sechium edule] >YP_009945471.1 ribosomal protein S7 [Sechium edule] >YP_010015184.1 ribosomal protein S7 [Gynostemma yixingense] >YP_010015200.1 ribosomal protein S7 [Gynostemma yixingense] >YP_010117490.1 ribosomal protein S7 [Begonia coptidifolia] >YP_010117561.1 ribosomal protein S7 [Begonia coptidifolia] >YP_010119779.1 ribosomal protein S7 [Hemsleya zhejiangensis] >YP_010119794.1 ribosomal protein S7 [Hemsleya zhejiangensis] >YP_010131139.1 ribosomal protein S7 [Benincasa hispida] >YP_010131152.1 ribosomal protein S7 [Benincasa hispida] >APW82508.1 ribosomal protein S7 [Citrullus lanatus subsp. vulgaris] >ASY96646.1 ribosomal protein S7 [Cucumis melo var. conomon] >ASY96734.1 ribosomal protein S7 [Cucumis melo var. makuwa] >ASY96821.1 ribosomal protein S7 [Cucumis melo var. momordica] >ASY96908.1 ribosomal protein S7 [Cucumis melo var. dudaim] >ASY96995.1 ribosomal protein S7 [Cucumis melo var. cantalupo] >ASY97169.1 ribosomal protein S7 [Cucumis melo var. inodorus] >ASY97343.1 ribosomal protein S7 [Cucumis melo var. flexuosus] >AXU40435.1 ribosomal protein S7 [Gomphogyne cissiformis var. villosa] >AXU40609.1 ribosomal protein S7 [Gomphogyne cissiformis var. cissiformis] >QIT04095.1 ribosomal protein S7 [Luffa aegyptiaca] >QJD26515.1 ribosomal protein S7 [Trichosanthes kirilowii var. japonica] >QJD26689.1 ribosomal protein S7 [Trichosanthes rosthornii] >QJF46430.1 ribosomal protein S7 [Cucumis melo] >QKX48520.1 ribosomal protein S7 [Luffa acutangula] >QNM38576.1 ribosomal protein S7 [Lagenaria siceraria var. microcarpa] >QZL38639.1 ribosomal protein S7 [Citrullus naudinianus] >QZL38727.1 ribosomal protein S7 [Citrullus ecirrhosus])

HSP 1 Score: 298 bits (763), Expect = 1.09e-101
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. NCBI nr
Match: YP_009763087.1 (ribosomal protein S7 [Mallotus peltatus] >YP_009763096.1 ribosomal protein S7 [Mallotus peltatus] >QQV39218.1 ribosomal protein S7 [Macaranga tanarius] >QZN08105.1 ribosomal protein S7 [Mallotus paniculatus] >QIR63426.1 ribosomal protein S7 [Mallotus peltatus] >QIR63435.1 ribosomal protein S7 [Mallotus peltatus] >QQV39230.1 ribosomal protein S7 [Macaranga tanarius])

HSP 1 Score: 298 bits (762), Expect = 1.55e-101
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. NCBI nr
Match: YP_004072507.1 (ribosomal protein S7 [Corynocarpus laevigatus] >YP_004072519.1 ribosomal protein S7 [Corynocarpus laevigatus] >ADO60355.1 ribosomal protein S7 [Corynocarpus laevigatus] >ADO60367.1 ribosomal protein S7 [Corynocarpus laevigatus])

HSP 1 Score: 297 bits (761), Expect = 2.20e-101
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. NCBI nr
Match: YP_009753134.1 (ribosomal protein S7 [Corallocarpus boehmii] >YP_009753148.1 ribosomal protein S7 [Corallocarpus boehmii] >QIT06206.1 ribosomal protein S7 [Corallocarpus boehmii] >QIT06220.1 ribosomal protein S7 [Corallocarpus boehmii])

HSP 1 Score: 297 bits (760), Expect = 3.12e-101
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGA+RKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAARKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. NCBI nr
Match: YP_009752795.1 (ribosomal protein S7 [Cyclantheropsis parviflora] >YP_009752809.1 ribosomal protein S7 [Cyclantheropsis parviflora] >QIT05445.1 ribosomal protein S7 [Cyclantheropsis parviflora] >QIT05459.1 ribosomal protein S7 [Cyclantheropsis parviflora])

HSP 1 Score: 296 bits (759), Expect = 4.44e-101
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAF+L
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFQL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-80
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-80
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of IVF0023471 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V 
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of IVF0023471 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V 
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of IVF0023471 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 21  RLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
           RL N L+     +GKK +A +I+  AM+ I   ++ NP+ V+  AI    P     A R+
Sbjct: 74  RLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGP--REDATRI 133

Query: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 134 GSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 193

Query: 141 AIRKKEETHRMAEANR 150
           AI+KK+E  R+A+ANR
Sbjct: 194 AIKKKDEIERVAKANR 207

The following BLAST results are available for this feature:

BLAST of IVF0023471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT8	3.7e-79	99.35	30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus O...	[more]
B1NWJ5	3.7e-79	99.35	30S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A P...	[more]
P07135	4.8e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV...	[more]
Q6EM99	6.3e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 ...	[more]
A4QJG0	8.2e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r...	[more]

BLAST of IVF0023471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3RUB1	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Trichosanthes rosthornii OX=676073 GN...	[more]
A0A249RYX2	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Cucumis melo var. momordica OX=203424...	[more]
A0A343F2D8	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Citrullus colocynthis OX=252529 GN=rp...	[more]
A0A6H0ET47	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN...	[more]
A0A6H0ETM2	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Ampelosycios humblotii OX=386639 GN=r...	[more]

BLAST of IVF0023471 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_131767149.1	1.09e-101	100.00	30S ribosomal protein S7 [Candidatus Frankia datiscae] >YP_004841829.1 ribosomal...	[more]
YP_009763087.1	1.55e-101	99.35	ribosomal protein S7 [Mallotus peltatus] >YP_009763096.1 ribosomal protein S7 [M...	[more]
YP_004072507.1	2.20e-101	99.35	ribosomal protein S7 [Corynocarpus laevigatus] >YP_004072519.1 ribosomal protein...	[more]
YP_009753134.1	3.12e-101	99.35	ribosomal protein S7 [Corallocarpus boehmii] >YP_009753148.1 ribosomal protein S...	[more]
YP_009752795.1	4.44e-101	99.35	ribosomal protein S7 [Cyclantheropsis parviflora] >YP_009752809.1 ribosomal prot...	[more]

BLAST of IVF0023471 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01240.1	5.8e-80	98.71	ribosomal protein S7	[more]
ATCG00900.1	5.8e-80	98.71	Ribosomal protein S7p/S5e family protein	[more]
AT2G07696.1	8.0e-13	32.14	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	8.0e-13	32.14	mitochondrial ribosomal protein S7	[more]
AT2G37270.1	5.9e-08	35.29	ribosomal protein 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 1..155 e-value: 5.2E-60 score: 203.5
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 2..149
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 3..155 e-value: 7.0E-55 score: 184.1
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 1..155
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 1..149 e-value: 1.7E-52 score: 177.0
IPR005717	Ribosomal protein S7, bacterial/organellar-type	TIGRFAM	TIGR01029	TIGR01029	coord: 3..155 e-value: 9.5E-63 score: 208.7
IPR005717	Ribosomal protein S7, bacterial/organellar-type	HAMAP	MF_00480_B	Ribosomal_S7_B	coord: 1..155 score: 30.690334
None	No IPR available	PANTHER	PTHR11205:SF44	30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC	coord: 1..155
None	No IPR available	CDD	cd14871	uS7_Chloroplast	coord: 10..154 e-value: 1.38081E-86 score: 247.959
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 20..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023471.2	IVF0023471.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding