IVF0023233 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAAACCAATGCGTTGGCTTAAACAACAACGTCCAAAAGCAGAACCCTTTCTTATAAAATCCACAGCTTCCAAACGCCAGTTTTCGTACACGGAAGAGATAGCAAGACTAAGCAATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGTTAGTTCTTTCACATTATGTTGGTTAAAAGTGATATTTTATGTTTTGTTCAATTTAGTTCGGTTCTAGTTGTCTGAATCTTAAAATTAGTTTTCCAAATTTGAATTTTATCAAATAATTATAATATTCTTTTTTTAGACAATAAAATTTAAAGAATTGTAAAAGTAAAACATGCAGAGAGACTGAATTTAATAACCCAAAATAAAATACATCACAATGTTTTACGACTTAAAGTGCTGGTTGGCCAACTGGTTGGAGTTCACAAATGTTGATTAATATGTTGGAATTATTAAATTTGTGGTTAAAGTGTAGAGTAGGAGGTTAGAGTTCCTCCACAATTATAAAAAGTAAATTAAGGTGATCGAGGTTTATAGCCTTAAAAGGTATATTAAGATGAAATTTTGAGTTTAAGGTGAAACGTATATAAGAAGAGGATATGTGAAATTAGGCACAATTTCTATAATCTTTCCTATTAAATTATTACAGAGTAATAATTGGGTGTAGCTTAGGTGCACCAAACTCTAAAACATCAATTTAAAAAAATGGTCATTTGGTAAACTTTGTTGGACAATTCCTTAGATAGGCACATCCAAAAGAGCACCCAAGTTCAAATAACACATAACACTTATCATGTGGTACAAGGTAGTTTTTCTTTTAAATGATTTTGTAATTTCTTCTTTTATGTGTTAAAATATGGGGAGTATGGGATTATAGTACACTTGTAGGACTCCCCTCCTAGAGGCAGGTAAAATGGAGGGGAGAAAGTATTCTCAGAGGAGGAAGAAAAAAACAGAAAAGATGATTAGTAGAAAAGGAAATTAGAGAATGACTCGTGTTATCAAACTGCACTCAAAAGTCATTTCAAATAAAGCCTAGCTTTGTAGGAAGGTTATATATTATAGGTTTTGAGAGGGATGTGTTGGGTGAGCAGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAATTGTTTAACAAATCAAAT GCAAAAACCAATGCGTTGGCTTAAACAACAACGTCCAAAAGCAGAACCCTTTCTTATAAAATCCACAGCTTCCAAACGCCAGTTTTCGTACACGGAAGAGATAGCAAGACTAAGCAATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAATTGTTTAACAAATCAAAT ATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAA MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGKKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT Homology
BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.9e-29 Identity = 77/96 (80.21%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20 Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of IVF0023233 vs. NCBI nr
Match: XP_008444894.1 (PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]) HSP 1 Score: 185 bits (469), Expect = 8.91e-59 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0023233 vs. NCBI nr
Match: KAA0065108.1 (hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]) HSP 1 Score: 184 bits (466), Expect = 2.56e-58 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0023233 vs. NCBI nr
Match: XP_038886259.1 (uncharacterized protein LOC120076486 [Benincasa hispida]) HSP 1 Score: 144 bits (363), Expect = 1.28e-42 Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0
BLAST of IVF0023233 vs. NCBI nr
Match: XP_022951050.1 (uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothetical protein SDJN03_18085, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141 bits (355), Expect = 2.39e-41 Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of IVF0023233 vs. NCBI nr
Match: KAG7020262.1 (hypothetical protein SDJN02_16945, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140 bits (353), Expect = 5.12e-41 Identity = 75/100 (75.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of IVF0023233 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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