IVF0023233 (gene) Melon (IVF77) v1

Overview


Name	IVF0023233
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	BnaC07g27580D protein
Location	chr03: 24706407 .. 24707759 (+)
RNA-Seq Expression	IVF0023233
Synteny	IVF0023233

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAAAACCAATGCGTTGGCTTAAACAACAACGTCCAAAAGCAGAACCCTTTCTTATAAAATCCACAGCTTCCAAACGCCAGTTTTCGTACACGGAAGAGATAGCAAGACTAAGCAATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGTTAGTTCTTTCACATTATGTTGGTTAAAAGTGATATTTTATGTTTTGTTCAATTTAGTTCGGTTCTAGTTGTCTGAATCTTAAAATTAGTTTTCCAAATTTGAATTTTATCAAATAATTATAATATTCTTTTTTTAGACAATAAAATTTAAAGAATTGTAAAAGTAAAACATGCAGAGAGACTGAATTTAATAACCCAAAATAAAATACATCACAATGTTTTACGACTTAAAGTGCTGGTTGGCCAACTGGTTGGAGTTCACAAATGTTGATTAATATGTTGGAATTATTAAATTTGTGGTTAAAGTGTAGAGTAGGAGGTTAGAGTTCCTCCACAATTATAAAAAGTAAATTAAGGTGATCGAGGTTTATAGCCTTAAAAGGTATATTAAGATGAAATTTTGAGTTTAAGGTGAAACGTATATAAGAAGAGGATATGTGAAATTAGGCACAATTTCTATAATCTTTCCTATTAAATTATTACAGAGTAATAATTGGGTGTAGCTTAGGTGCACCAAACTCTAAAACATCAATTTAAAAAAATGGTCATTTGGTAAACTTTGTTGGACAATTCCTTAGATAGGCACATCCAAAAGAGCACCCAAGTTCAAATAACACATAACACTTATCATGTGGTACAAGGTAGTTTTTCTTTTAAATGATTTTGTAATTTCTTCTTTTATGTGTTAAAATATGGGGAGTATGGGATTATAGTACACTTGTAGGACTCCCCTCCTAGAGGCAGGTAAAATGGAGGGGAGAAAGTATTCTCAGAGGAGGAAGAAAAAAACAGAAAAGATGATTAGTAGAAAAGGAAATTAGAGAATGACTCGTGTTATCAAACTGCACTCAAAAGTCATTTCAAATAAAGCCTAGCTTTGTAGGAAGGTTATATATTATAGGTTTTGAGAGGGATGTGTTGGGTGAGCAGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAATTGTTTAACAAATCAAAT

mRNA sequence

GCAAAAACCAATGCGTTGGCTTAAACAACAACGTCCAAAAGCAGAACCCTTTCTTATAAAATCCACAGCTTCCAAACGCCAGTTTTCGTACACGGAAGAGATAGCAAGACTAAGCAATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAATTGTTTAACAAATCAAAT

Coding sequence (CDS)

ATGGACGAGACAAGAGCAGCTACTTCAACGCCGCCGCAAGACGACGGCGCAAGGGCGTTTTCCGGGCGGAAACAAGAAGCCTCGGTGATGGATCGTGTTAAGAAGGGGTGCACTTCCTTTTATGCGTCTTCTCAAGAGACGCTGGGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATAACGGCAAAGAGCGAGAAGGAAGCAGCAGAAGCAGATTTAAGGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCCGCAGAGAACTTGAAGAACGGAACTTAA

Protein sequence

MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGKKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT

Homology

[Close]

BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60
          MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 96
          KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60
          MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 96
          KITAKSEKEAAEADL+TAKMQVQATEAAENLKNGT
Sbjct: 61 KITAKSEKEAAEADLKTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MDETRAAT---STPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVG 60
          MDE RA+T     PPQD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVG
Sbjct: 1  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 96
          WGKK+TAKSEKEAAEADL+ AKMQV+ATEAAEN K GT
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT 98

[Close]

BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.9e-29
Identity = 77/96 (80.21%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MDETRAATSTPP-QDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWG 60
          MDE RA  STPP QDDGA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVGWG
Sbjct: 1  MDEIRA--STPPLQDDGAGRFSGWKEEASVMDRVKKGCMAVYASSQEALRYVKAFFVGWG 60

Query: 61 KKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 96
          KK+TAKSEKEAAEADL+ AKMQV+ATEAAEN K GT
Sbjct: 61 KKMTAKSEKEAAEADLKMAKMQVEATEAAENTKKGT 94

[Close]

BLAST of IVF0023233 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 30 MDRVKKGCTSFYASSQETLGYVKAFFVGWGKKITAKSEKEAAEADLRTAKMQVQATEAAE 89
          MDR+K GC SFYASSQETL YVKAFFVGWGKK+TAK+E+EAA+ADL+TAKMQVQATEAAE
Sbjct: 1  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAE 60

Query: 90 NLKN 94
          N KN
Sbjct: 61 NTKN 64

[Close]

BLAST of IVF0023233 vs. NCBI nr
Match: XP_008444894.1 (PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo])

HSP 1 Score: 185 bits (469), Expect = 8.91e-59
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60
          MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95
          KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of IVF0023233 vs. NCBI nr
Match: KAA0065108.1 (hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (466), Expect = 2.56e-58
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60
          MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95
          KITAKSEKEAAEADL+TAKMQVQATEAAENLKNGT
Sbjct: 61 KITAKSEKEAAEADLKTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of IVF0023233 vs. NCBI nr
Match: XP_038886259.1 (uncharacterized protein LOC120076486 [Benincasa hispida])

HSP 1 Score: 144 bits (363), Expect = 1.28e-42
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60
          MDE RA+ STPPQDDGA  FSGRKQEASVMD VKKG   F ASSQETL YVKAFFVGWGK
Sbjct: 1  MDEIRAS-STPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGK 60

Query: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNG 94
          K+TAKSEKEAAEADL+TAKMQVQATEAAEN K G
Sbjct: 61 KMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 93

[Close]

BLAST of IVF0023233 vs. NCBI nr
Match: XP_022951050.1 (uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothetical protein SDJN03_18085, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (355), Expect = 2.39e-41
Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MDETRAATSTPP---QDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVG 60
          MDE RA+T  PP   QD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVG
Sbjct: 1  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95
          WGKK+TAKSEKEAAEADL+ AKMQV+ATEAAEN K GT
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT 98

[Close]

BLAST of IVF0023233 vs. NCBI nr
Match: KAG7020262.1 (hypothetical protein SDJN02_16945, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140 bits (353), Expect = 5.12e-41
Identity = 75/100 (75.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MDETRAATSTPP-----QDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFF 60
           MDE RA+T  PP     QD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFF
Sbjct: 1   MDEIRASTPPPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFF 60

Query: 61  VGWGKKITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95
           VGWGKK+TAKSEKEAAEADL+ AKMQV+ATEAAEN K GT
Sbjct: 61  VGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT 100

[Close]

BLAST of IVF0023233 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13
Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 19 AFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGKKITAKSEKEAAEADLRTA 78
          A + R+   S+ DRVK  C S   + QE   YVKAFFVG  K++TAK+EKEA EA L   
Sbjct: 4  AETSRQPAKSLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTET 63

Query: 79 KMQVQATEAAENLK 93
          KMQV AT+ AEN K
Sbjct: 64 KMQVDATDEAENAK 77

The following BLAST results are available for this feature:

BLAST of IVF0023233 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0023233 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC67	7.9e-43	100.00	uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=...	[more]
A0A5A7VBV2	1.8e-42	98.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GHI8	1.3e-29	76.53	uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KRV8	2.9e-29	80.21	uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934...	[more]
A0A6J1BRY6	1.1e-20	84.38	uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of IVF0023233 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444894.1	8.91e-59	100.00	PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]	[more]
KAA0065108.1	2.56e-58	98.95	hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]	[more]
XP_038886259.1	1.28e-42	84.04	uncharacterized protein LOC120076486 [Benincasa hispida]	[more]
XP_022951050.1	2.39e-41	76.53	uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothet...	[more]
KAG7020262.1	5.12e-41	75.00	hypothetical protein SDJN02_16945, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0023233 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38465.1	4.9e-13	54.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023233.1	IVF0023233.1	mRNA