IVF0023128 (gene) Melon (IVF77) v1

Overview


Name	IVF0023128
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTERF5
Location	chr03: 22603290 .. 22604829 (+)
RNA-Seq Expression	IVF0023128
Synteny	IVF0023128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGACAATCGGCCCACATACCCACCGAAACCTCTTCTTTCCCTTTCCAATGGCCAATTCTCTTCTCAAACCTTCTCTACTACGCCCCTTTGCTCAAGACCTCCGGAATTTCACACACAACAACACCACGATTGGCCTCAAATTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACAAGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAATCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCTGTCTCCTTCTTGCCGATCCGGACACAACACTCAAGCCCAAGATCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTACTCGCCGACGTAATCTGTAGGGACCCACATATTCTTCATAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCATAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCCGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATGTCGAAGTACTGAGAGCTAATGGTGTGCCCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAAGGATGTGGAACACTTTATTGACATTGTCGAGAAGACAAAGGAAATGGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGATGTGTATGATTGCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACATTGGAAGATGTTTCCAAGTACCCAGTTTTGCTCAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCAGCGCCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCAAAGCATTGCAAAGACCCGAGCAATGGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGACGAAGAAGAAGATGGCGATACAATGAAAACTCTCCTCTTCACTTCGGGTAATTCGTCTATTCTGCTACCAACTCTGCACTTCACTCTGTGAGAGAGAGCCTGTAGGTTTGTGTGCAAAGCTTGTGAGATTTCACTGATCTTAGAACTGTGATTTGCTGATAACCGACATATGATAGTTATAGCATTTGATCTTTTAGGAATTTACCAACTTGCATGAGACTGCGCCAAGAGAAGTAACTAATTATGATGCTTAATTTTAAAGATTGGTGTTGTTAGGGATTATCATTGATGATTGGGGAGTTCCTCTTCCATTTACTAACAGAAGTAGTTTGTATCTCTTGTTTTGTTTTGGTTTTTCCCGC

mRNA sequence

GTCGACAATCGGCCCACATACCCACCGAAACCTCTTCTTTCCCTTTCCAATGGCCAATTCTCTTCTCAAACCTTCTCTACTACGCCCCTTTGCTCAAGACCTCCGGAATTTCACACACAACAACACCACGATTGGCCTCAAATTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACAAGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAATCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCTGTCTCCTTCTTGCCGATCCGGACACAACACTCAAGCCCAAGATCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTACTCGCCGACGTAATCTGTAGGGACCCACATATTCTTCATAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCATAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCCGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATGTCGAAGTACTGAGAGCTAATGGTGTGCCCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAAGGATGTGGAACACTTTATTGACATTGTCGAGAAGACAAAGGAAATGGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGATGTGTATGATTGCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACATTGGAAGATGTTTCCAAGTACCCAGTTTTGCTCAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCAGCGCCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCAAAGCATTGCAAAGACCCGAGCAATGGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGACGAAGAAGAAGATGGCGATACAATGAAAACTCTCCTCTTCACTTCGGGTAATTCGTCTATTCTGCTACCAACTCTGCACTTCACTCTGTGAGAGAGAGCCTGTAGGTTTGTGTGCAAAGCTTGTGAGATTTCACTGATCTTAGAACTGTGATTTGCTGATAACCGACATATGATAGTTATAGCATTTGATCTTTTAGGAATTTACCAACTTGCATGAGACTGCGCCAAGAGAAGTAACTAATTATGATGCTTAATTTTAAAGATTGGTGTTGTTAGGGATTATCATTGATGATTGGGGAGTTCCTCTTCCATTTACTAACAGAAGTAGTTTGTATCTCTTGTTTTGTTTTGGTTTTTCCCGC

Coding sequence (CDS)

ATGGCCAATTCTCTTCTCAAACCTTCTCTACTACGCCCCTTTGCTCAAGACCTCCGGAATTTCACACACAACAACACCACGATTGGCCTCAAATTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACAAGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAATCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCTGTCTCCTTCTTGCCGATCCGGACACAACACTCAAGCCCAAGATCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTACTCGCCGACGTAATCTGTAGGGACCCACATATTCTTCATAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCATAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCCGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATGTCGAAGTACTGAGAGCTAATGGTGTGCCCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAAGGATGTGGAACACTTTATTGACATTGTCGAGAAGACAAAGGAAATGGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGATGTGTATGATTGCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACATTGGAAGATGTTTCCAAGTACCCAGTTTTGCTCAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCAGCGCCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCAAAGCATTGCAAAGACCCGAGCAATGGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGACGAAGAAGAAGATGGCGATACAATGA

Protein sequence

MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFVMKYLSEDPHLLEMYQETKKKMAIQ

Homology

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BLAST of IVF0023128 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08
Identity = 65/298 (21.81%), Postives = 125/298 (41.95%), Query Frame = 0


Query: 42  STNDRTQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGF-TPSHIASIFSK 101
           S N + +  L+H  G+PK+       K+ L       SV  +     F  P     I ++
Sbjct: 180 SFNQKVRLLLLH--GIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIAR 239

Query: 102 QSCLLLADPDTTLKPKIEFL-SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINF 161
           +  +L +D D+ L P+++F+ + +G        V+ R P IL  S++  +   ++FL +F
Sbjct: 240 RPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKSF 299

Query: 162 FGSTDGVVLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVE 221
            G T   V          +  +    + P +E L+  G     + K LS  P+ L+    
Sbjct: 300 AGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSEN 359

Query: 222 HFIDIVEKTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQ 281
           +    +    ++G    +      M  +   S D     + L+ S+G S E   +M  K 
Sbjct: 360 NLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKH 419

Query: 282 PFFMKRSEEHLKRMLDFFMNKWDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKG 338
           P  ++ +   L+  L++ +      +E++  +P  L   L+ R+  R    ++L S+G
Sbjct: 420 PQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG 472

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BLAST of IVF0023128 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 54/275 (19.64%), Postives = 127/275 (46.18%), Query Frame = 0


Query: 66  AKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSKNGI 125
           A++I + P   P  +L   + +G   SH   ++ +    L  +   + + ++++L   G+
Sbjct: 175 AEEIDIDPKCVP--LLDYLSTFGLKESHFVQMYERHMPSLQINV-FSAQERLDYLLSVGV 234

Query: 126 SGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETFSES 185
               +  ++ R P IL  +++  +   I FL+   G  +  +    A   +    +   S
Sbjct: 235 KHRDIKRMLLRQPQILQYTVENNLKAHISFLMG-LGIPNSKIGQIVAATPSLFSYSVENS 294

Query: 186 MAPNVE-VLRANGVPDSNIAKMLSLRPIALSK--DVEHFIDIVEKTKEMGLNPSSLMFI- 245
           + P +  ++   G+ ++++ K++ L P  L +  D+      +  +KE+G    S++ + 
Sbjct: 295 LRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMV 354

Query: 246 --HGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRS-EEHLKRMLDFFM 305
             H   +  S+  D +L +++  +S G  +     +       +  S E++LK    + +
Sbjct: 355 KKHPQLLHYSID-DGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLV 414

Query: 306 NKWDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRL 334
           N+ +  +  ++KYP+ L+LSL++R+ PR   +  L
Sbjct: 415 NELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVEL 444

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BLAST of IVF0023128 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-06
Identity = 61/250 (24.40%), Postives = 102/250 (40.80%), Query Frame = 0


Query: 88  GFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDK 147
           G     I +I  K +       D  +KP +EFL   GI  + +  ++C+ P I   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 148 QIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKML 207
            + P + FL       +    + S      +L    + +   VE L   G+ +  I ++L
Sbjct: 267 NLKPTMAFLETLGIDKNQWAKIISR--FPAILTYSRQKLTSTVEFLSQTGLTEEQIGRIL 326

Query: 208 SLRPIALSKDVEHFIDIVEKTKE--MGLNPSSLMFIHGMCMIASMSKDKWLSKVHLF--- 267
           +  P  +S  VE   D +  T E    LN    + +H       +S +  L  V  F   
Sbjct: 327 TRCPNIMSYSVE---DKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLE 386

Query: 268 KSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTLEDVSKYPVLLNLSLEKR 327
           K FG  DE    +      +    +E++    D+F    D+   ++ K+P     SL++R
Sbjct: 387 KGFG-LDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQER 446

Query: 328 VIPRSSIVQR 333
           + PR  +VQR
Sbjct: 447 IKPRYELVQR 449

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BLAST of IVF0023128 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 8.7e-05
Identity = 45/167 (26.95%), Postives = 72/167 (43.11%), Query Frame = 0


Query: 62  ALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLS 121
           AL     +R  P +   SV  L ++ G +   +  I      LL +DP++ + P + FLS
Sbjct: 50  ALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLS 109

Query: 122 KN-GISGNLLADVICRDPHILHRSLDKQIVPCIDFL--INFFG----STDGVVLLFSAGG 181
               IS   +   I R P +L  S+D Q+ P + FL  + F G    ++   VLL S   
Sbjct: 110 NEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVS--- 169

Query: 182 GTRVLETFSESMAPNVEVLRAN-GVPDSNIAKMLSLRPIALSKDVEH 221
                     ++ P +E L    G     +AKM+   P  L+  V++
Sbjct: 170 ------NVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDN 207

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BLAST of IVF0023128 vs. ExPASy TrEMBL
Match: A0A5A7V906 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001540 PE=3 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 7.4e-217
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV
Sbjct: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAIQ 385
           MKYLSEDPHLLEMYQETKKKMAIQ
Sbjct: 361 MKYLSEDPHLLEMYQETKKKMAIQ 384

[Close]

BLAST of IVF0023128 vs. ExPASy TrEMBL
Match: A0A1S3BCE7 (transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488393 PE=3 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 7.4e-217
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV
Sbjct: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAIQ 385
           MKYLSEDPHLLEMYQETKKKMAIQ
Sbjct: 361 MKYLSEDPHLLEMYQETKKKMAIQ 384

[Close]

BLAST of IVF0023128 vs. ExPASy TrEMBL
Match: A0A5A7UKN0 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00090 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.0e-194
Identity = 352/383 (91.91%), Postives = 366/383 (95.56%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMF
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHG+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFV
Sbjct: 301 WDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 384
           MKYLS+DPHLLEMYQE KKKMAI
Sbjct: 361 MKYLSKDPHLLEMYQE-KKKMAI 382

[Close]

BLAST of IVF0023128 vs. ExPASy TrEMBL
Match: A0A1S3BCI2 (transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488160 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.0e-194
Identity = 352/383 (91.91%), Postives = 366/383 (95.56%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMF
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHG+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFV
Sbjct: 301 WDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 384
           MKYLS+DPHLLEMYQE KKKMAI
Sbjct: 361 MKYLSKDPHLLEMYQE-KKKMAI 382

[Close]

BLAST of IVF0023128 vs. ExPASy TrEMBL
Match: A0A0A0LK19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346010 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.7e-168
Identity = 310/383 (80.94%), Postives = 337/383 (87.99%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           M N LLKPSLLR FAQDLR+FTHNNTTIGLKFLSSLSQTPQSTND T DYL+HTIGL K 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAK+IRLKPTA PDSVLALFNAYGFTPSHIASIFS++  LLLA+PDTTLKPK EFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           S+NGISGN LADVI RDP IL RSLDKQIVPCIDFLINFFGSTD +V LFS    TRVL 
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSE +APN+EVLRANGV DSNIAK+L +RPIALS+DVE F DIVEKT+E G NPSSLMF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHG+C ++SMSKDKWLSK+HLF+SFGWSDEQFQSMFLK+PF M  SEEHLKR LDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT ED+SKY +LLN SLEKR+IPRSSI+Q LISKGFIKRKS G AL  PE  FLEKFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 384
           MKYLSEDP+LLEMYQE KKKMA+
Sbjct: 361 MKYLSEDPNLLEMYQE-KKKMAL 382

[Close]

BLAST of IVF0023128 vs. NCBI nr
Match: XP_008445328.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis melo] >KAA0064842.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 764 bits (1972), Expect = 2.47e-278
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV
Sbjct: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAIQ 384
           MKYLSEDPHLLEMYQETKKKMAIQ
Sbjct: 361 MKYLSEDPHLLEMYQETKKKMAIQ 384

[Close]

BLAST of IVF0023128 vs. NCBI nr
Match: XP_008444984.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0054069.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYJ96854.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 689 bits (1777), Expect = 1.20e-248
Identity = 352/383 (91.91%), Postives = 366/383 (95.56%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MANSLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLE
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMF
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHG+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFV
Sbjct: 301 WDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 383
           MKYLS+DPHLLEMYQE KKKMAI
Sbjct: 361 MKYLSKDPHLLEMYQE-KKKMAI 382

[Close]

BLAST of IVF0023128 vs. NCBI nr
Match: XP_004143080.2 (uncharacterized protein LOC101214641 [Cucumis sativus] >KGN62260.1 hypothetical protein Csa_018661 [Cucumis sativus])

HSP 1 Score: 603 bits (1555), Expect = 1.62e-214
Identity = 310/383 (80.94%), Postives = 337/383 (87.99%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           M N LLKPSLLR FAQDLR+FTHNNTTIGLKFLSSLSQTPQSTND T DYL+HTIGL K 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAK+IRLKPTA PDSVLALFNAYGFTPSHIASIFS++  LLLA+PDTTLKPK EFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           S+NGISGN LADVI RDP IL RSLDKQIVPCIDFLINFFGSTD +V LFS    TRVL 
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSE +APN+EVLRANGV DSNIAK+L +RPIALS+DVE F DIVEKT+E G NPSSLMF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           IHG+C ++SMSKDKWLSK+HLF+SFGWSDEQFQSMFLK+PF M  SEEHLKR LDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT ED+SKY +LLN SLEKR+IPRSSI+Q LISKGFIKRKS G AL  PE  FLEKFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 383
           MKYLSEDP+LLEMYQE KKKMA+
Sbjct: 361 MKYLSEDPNLLEMYQE-KKKMAL 382

[Close]

BLAST of IVF0023128 vs. NCBI nr
Match: XP_004138819.1 (uncharacterized protein LOC101219073 [Cucumis sativus] >KGN63092.1 hypothetical protein Csa_022198 [Cucumis sativus])

HSP 1 Score: 580 bits (1495), Expect = 1.06e-205
Identity = 292/383 (76.24%), Postives = 329/383 (85.90%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           MAN L KPSLLR +AQDLRNF HN TTIGL FLSSLSQ+PQSTN RT DYL+HTIGL KD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SALAAAKKI LKP++DPDSVLALFNAYGFTPS  A+IF +Q  LLLADPD TLKPK EFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           SKNGISGN L D+ICR+PHIL RSLDK+IVPC DFLINFFGSTD +V LF     TRVL 
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
           TFSE MAPN+EVLRANGVPDS+IAK+   RP+ALS+DV+ F DIVEKTKE G NPSSLMF
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           I+G+C+++SMSKD+WLSK+H+F+S+GWSDEQFQSMFLKQP FM RSEE LKR LDFFMNK
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
           WDWT E++ +YP++L LS EKRV+PRSSI+Q LISKG IKRKS G AL+  E  FLEKFV
Sbjct: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 383
           M+YLSEDPHLLEMYQE KKK+AI
Sbjct: 361 MQYLSEDPHLLEMYQE-KKKIAI 382

[Close]

BLAST of IVF0023128 vs. NCBI nr
Match: XP_022132136.1 (transcription termination factor MTERF8, chloroplastic-like [Momordica charantia])

HSP 1 Score: 514 bits (1324), Expect = 1.02e-179
Identity = 268/383 (69.97%), Postives = 307/383 (80.16%), Query Frame = 0


Query: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60
           M+N L K  L R  A+DLR FT N+ +IGL   SSLSQ  QSTN+RT DYLV T+GL KD
Sbjct: 1   MSNFLFKAPL-RLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKD 60

Query: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120
           SA+A AK+I LK TA+PDSV+ALF AYGF PS+ ASIF +   LLLADPDTTLKPK+EFL
Sbjct: 61  SAVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFL 120

Query: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180
           S+NG+SG +L DVI RDP IL RSLDKQI+PCIDFL NFFGSTDG+V LFSA  GT VL 
Sbjct: 121 SQNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180

Query: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240
            FSES+APN+E LRA GVPDSNIAKM+ +RP  LS+D E FIDIVEKTKE G NPSSLMF
Sbjct: 181 KFSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMF 240

Query: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300
           I+G+C  + M KDKWLSK+ +FKSFGWS+EQFQS+FLKQP FM  SEE +KR LDFFMNK
Sbjct: 241 IYGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNK 300

Query: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360
            DWT E++SKYP++L LS EKRVIPRSSI+Q LISKGFIK+ S GKA    E  FL KFV
Sbjct: 301 LDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFV 360

Query: 361 MKYLSEDPHLLEMYQETKKKMAI 383
           M+YLS+DPHLLEMYQ   KKMAI
Sbjct: 361 MQYLSKDPHLLEMYQ---KKMAI 379

[Close]

BLAST of IVF0023128 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-47
Identity = 110/330 (33.33%), Postives = 181/330 (54.85%), Query Frame = 0


Query: 47  TQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLL 106
           T +YL+ + GL  DSA  A++K+ L     P++VL L   +GFT + I+S+  K+  LLL
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 130

Query: 107 ADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGV 166
           A+ ++ L PK+ F    G+S +LLA  +  DP IL RSL  Q++P  +FL +   S + +
Sbjct: 131 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKI 190

Query: 167 VLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVE 226
           V           LE  ++++ PN+  +   GVP+  I  +L+  P A+ +    F  I +
Sbjct: 191 VAALRRTTWV-FLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAK 250

Query: 227 KTKEMGLNPSSLMFIHGMCMIASM-SKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKR 286
           + +EMG NP    F+  +  ++   +K  W     +++ +GWS++     F K P  M  
Sbjct: 251 QAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMML 310

Query: 287 SEEHLKRMLDFFMNKWDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRK-SF 346
           SE  + R +++F+N+ +     +++ PV+L  SLEKR+IPR S+ + L+S G +K   S 
Sbjct: 311 SERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSL 370

Query: 347 GKALQRPEQWFLEKFVMKYLSEDPHLLEMY 375
              L   E+ FLEK V+KY  E P L+ +Y
Sbjct: 371 TSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of IVF0023128 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 169.5 bits (428), Expect = 5.4e-42
Identity = 100/334 (29.94%), Postives = 169/334 (50.60%), Query Frame = 0


Query: 47  TQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLL 106
           T  YLV + GL  +SA + ++ ++L  +  PDSVLALF  +GFT   I S+      +L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 107 ADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGV 166
             P+  + PK+ F S  G S +  A +I   P +L  SL K+++PC D L +     + V
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 167 VLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVE 226
           V     G     L+  +  ++  V + R  GVPD +I  ++   P         F +++ 
Sbjct: 178 VKCLKRGIRCFSLK-ITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLN 237

Query: 227 KTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRS 286
           +    G +P    F+H M      S+     K  LF+ FGWS E F +  ++ P  +  S
Sbjct: 238 RVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVS 297

Query: 287 EEHLKRMLDFFMNKWDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRK--SF 346
           +E +   L++ +N       D+   PV+L+LS+EKR+ PR+ ++  L+SKG +K++  ++
Sbjct: 298 DEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINY 357

Query: 347 GKALQRPEQWFLEKFVMKYLSEDPHLLEMYQETK 379
              L+     F++KFV+KY  E P L++ +   +
Sbjct: 358 FTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSNR 390

[Close]

BLAST of IVF0023128 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 145.6 bits (366), Expect = 8.3e-35
Identity = 108/370 (29.19%), Postives = 175/370 (47.30%), Query Frame = 0


Query: 47  TQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLL 106
           T  YLV ++GLPK  A + ++K+  +   +PDSVL L  ++GFT S I++I +    LL+
Sbjct: 54  TVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLV 113

Query: 107 ADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGV 166
           AD + +L PK++FL   G S + L +++   P IL +   K I    DF+          
Sbjct: 114 ADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKE-------- 173

Query: 167 VLLFSAGGGTRVLETFS----ESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDV---- 226
            LL  +    +  + F     E+   N+ VLR  G+P         L P+ +S DV    
Sbjct: 174 TLLDKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHK------LLFPLLISCDVPVFG 233

Query: 227 -EHFIDIVEKTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFL 286
            E F + ++K  EMG +PS+  F+  +C++  +S      KV+ +K  G+  E   ++F 
Sbjct: 234 KEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFK 293

Query: 287 KQPFFMKRSE-----------------------------------EHLKRMLDFFMNKWD 346
           + P F+  SE                                   E +K+  +F + K +
Sbjct: 294 RWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMN 353

Query: 347 WTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFI--KRKSFGKALQRPEQWFLEKFV 371
           W L+ +   P +L  SLEKR +PR ++VQ LISKG I  +  S  +     +Q FL ++V
Sbjct: 354 WPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYV 407

[Close]

BLAST of IVF0023128 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-32
Identity = 103/365 (28.22%), Postives = 174/365 (47.67%), Query Frame = 0


Query: 44  NDRTQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSC 103
           N+ T  YLV ++GL    A + ++K+  +   +PDSVL L  ++GFT S I++I      
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 104 LLLADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFF--G 163
           LL+AD + +L PK++FL   G S + + +++   P IL +   K I    DF+ +     
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 164 STDGVVLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDV--- 223
           S+    L  S   G        E+   NV VLR  G+P   +  +L    I+ S+ V   
Sbjct: 171 SSKNEKLCHSLPQGN------LENKIRNVSVLRELGMPHKLLFSLL----ISDSQPVCGK 230

Query: 224 EHFIDIVEKTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLK 283
           E F + ++K  EMG +P++  F+  + +I  M++     KVHL+KS G+      S F K
Sbjct: 231 EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKK 290

Query: 284 QPFFMKRSE-----------------------------------EHLKRMLDFFMNKWDW 343
            P  ++ SE                                   E +K+  +F + K +W
Sbjct: 291 WPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNW 350

Query: 344 TLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRK--SFGKALQRPEQWFLEKFVM 367
            L+ V   P +   SLEKR++PR ++++ L+SKG ++ +  S    L   +Q FL ++V 
Sbjct: 351 PLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVA 405

[Close]

BLAST of IVF0023128 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-32
Identity = 103/365 (28.22%), Postives = 174/365 (47.67%), Query Frame = 0


Query: 44  NDRTQDYLVHTIGLPKDSALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSC 103
           N+ T  YLV ++GL    A + ++K+  +   +PDSVL L  ++GFT S I++I      
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 104 LLLADPDTTLKPKIEFLSKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFF--G 163
           LL+AD + +L PK++FL   G S + + +++   P IL +   K I    DF+ +     
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 164 STDGVVLLFSAGGGTRVLETFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDV--- 223
           S+    L  S   G        E+   NV VLR  G+P   +  +L    I+ S+ V   
Sbjct: 171 SSKNEKLCHSLPQGN------LENKIRNVSVLRELGMPHKLLFSLL----ISDSQPVCGK 230

Query: 224 EHFIDIVEKTKEMGLNPSSLMFIHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLK 283
           E F + ++K  EMG +P++  F+  + +I  M++     KVHL+KS G+      S F K
Sbjct: 231 EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKK 290

Query: 284 QPFFMKRSE-----------------------------------EHLKRMLDFFMNKWDW 343
            P  ++ SE                                   E +K+  +F + K +W
Sbjct: 291 WPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNW 350

Query: 344 TLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRK--SFGKALQRPEQWFLEKFVM 367
            L+ V   P +   SLEKR++PR ++++ L+SKG ++ +  S    L   +Q FL ++V 
Sbjct: 351 PLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVA 405

The following BLAST results are available for this feature:

BLAST of IVF0023128 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	1.3e-08	21.81	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	2.1e-06	19.64	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	2.7e-06	24.40	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	8.7e-05	26.95	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0023128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V906	7.4e-217	100.00	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BCE7	7.4e-217	100.00	transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5A7UKN0	3.0e-194	91.91	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BCI2	3.0e-194	91.91	transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A0A0LK19	1.7e-168	80.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346010 PE=3 SV=1	[more]

BLAST of IVF0023128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445328.1	2.47e-278	100.00	PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis ...	[more]
XP_008444984.1	1.20e-248	91.91	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]
XP_004143080.2	1.62e-214	80.94	uncharacterized protein LOC101214641 [Cucumis sativus] >KGN62260.1 hypothetical ...	[more]
XP_004138819.1	1.06e-205	76.24	uncharacterized protein LOC101219073 [Cucumis sativus] >KGN63092.1 hypothetical ...	[more]
XP_022132136.1	1.02e-179	69.97	transcription termination factor MTERF8, chloroplastic-like [Momordica charantia...	[more]

BLAST of IVF0023128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.1e-47	33.33	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.4e-42	29.94	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	8.3e-35	29.19	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	6.6e-32	28.22	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	6.6e-32	28.22	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 204..234 e-value: 470.0 score: 6.4 coord: 131..163 e-value: 0.098 score: 21.8 coord: 238..268 e-value: 570.0 score: 5.8 coord: 95..126 e-value: 0.12 score: 21.4 coord: 273..304 e-value: 23.0 score: 13.9 coord: 305..339 e-value: 5.2 score: 16.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 81..158 e-value: 2.2E-10 score: 40.0 coord: 184..355 e-value: 4.2E-24 score: 85.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..380
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 58..173 e-value: 2.8E-20 score: 74.5 coord: 175..370 e-value: 8.0E-38 score: 132.1
None	No IPR available	PANTHER	PTHR13068:SF187	SUBFAMILY NOT NAMED	coord: 1..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023128.1	IVF0023128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding