IVF0022788 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGCTTCCATCAACTACTTTTGTGTACTGATCTTCTTCTTTTGTCTCCTCTCCAAAGGTAAATATATATATATATATATATATATATATATATATATATATATTCTTTAACCCTTACCATCAAGATTTTGTGTGATGACACCATTTACGGGTTCATTTGAAACAAAATCACGAGAGTTTATATGTTCAACGAACAATATCACCTTCTTTTCTTAATAACTAATTTTATTTTATTTTTTTATAGGGATCAATTGCCAATGCTCGATAAATGACATAGTAATAAGTCAAAGCACAACTGGAAAAGAAGTGAATGGGAAGCAAGAATGGAGAGCAACAATCAGAAACAAATGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAACACAGTTGAAAAGGTTGACGAATCCATATTAATGGTTGCTGGGTCAGTGTGTTTGGTTAACAATGGTCAACCAATCTTTAACTCATCACCAATCTCCTTCACTTATGCTTGGGATAATGCCTTCTCTTTCAAGCCTCTCTTCTCTCAAGTTGCCTGTTCTTAA ATGGTTGCTTCCATCAACTACTTTTGTGTACTGATCTTCTTCTTTTGTCTCCTCTCCAAAGGGATCAATTGCCAATGCTCGATAAATGACATAGTAATAAGTCAAAGCACAACTGGAAAAGAAGTGAATGGGAAGCAAGAATGGAGAGCAACAATCAGAAACAAATGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAACACAGTTGAAAAGGTTGACGAATCCATATTAATGGTTGCTGGGTCAGTGTGTTTGGTTAACAATGGTCAACCAATCTTTAACTCATCACCAATCTCCTTCACTTATGCTTGGGATAATGCCTTCTCTTTCAAGCCTCTCTTCTCTCAAGTTGCCTGTTCTTAA ATGGTTGCTTCCATCAACTACTTTTGTGTACTGATCTTCTTCTTTTGTCTCCTCTCCAAAGGGATCAATTGCCAATGCTCGATAAATGACATAGTAATAAGTCAAAGCACAACTGGAAAAGAAGTGAATGGGAAGCAAGAATGGAGAGCAACAATCAGAAACAAATGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAACACAGTTGAAAAGGTTGACGAATCCATATTAATGGTTGCTGGGTCAGTGTGTTTGGTTAACAATGGTCAACCAATCTTTAACTCATCACCAATCTCCTTCACTTATGCTTGGGATAATGCCTTCTCTTTCAAGCCTCTCTTCTCTCAAGTTGCCTGTTCTTAA MVASINYFCVLIFFFCLLSKGINCQCSINDIVISQSTTGKEVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFSFKPLFSQVACS Homology
BLAST of IVF0022788 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05 Identity = 30/103 (29.13%), Postives = 52/103 (50.49%), Query Frame = 0
BLAST of IVF0022788 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of IVF0022788 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42 Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0
BLAST of IVF0022788 vs. ExPASy TrEMBL
Match: A0A6J1CKK7 (uncharacterized protein At1g05835-like OS=Momordica charantia OX=3673 GN=LOC111012144 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.2e-36 Identity = 80/124 (64.52%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of IVF0022788 vs. ExPASy TrEMBL
Match: A0A6J1CAC8 (uncharacterized protein LOC111008881 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008881 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of IVF0022788 vs. ExPASy TrEMBL
Match: A0A6J1C8A1 (uncharacterized protein LOC111008881 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008881 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.8e-29 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = 0
BLAST of IVF0022788 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus]) HSP 1 Score: 229 bits (585), Expect = 1.41e-75 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of IVF0022788 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 216 bits (550), Expect = 3.07e-70 Identity = 108/124 (87.10%), Postives = 113/124 (91.13%), Query Frame = 0
BLAST of IVF0022788 vs. NCBI nr
Match: XP_022141896.1 (uncharacterized protein At1g05835-like [Momordica charantia]) HSP 1 Score: 159 bits (401), Expect = 1.56e-47 Identity = 80/124 (64.52%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of IVF0022788 vs. NCBI nr
Match: XP_022137438.1 (uncharacterized protein LOC111008881 isoform X1 [Momordica charantia]) HSP 1 Score: 137 bits (345), Expect = 5.20e-39 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of IVF0022788 vs. NCBI nr
Match: XP_022137447.1 (uncharacterized protein LOC111008881 isoform X2 [Momordica charantia]) HSP 1 Score: 135 bits (341), Expect = 2.11e-38 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = 0
BLAST of IVF0022788 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 81.3 bits (199), Expect = 6.2e-16 Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of IVF0022788 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 75.9 bits (185), Expect = 2.6e-14 Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 0
BLAST of IVF0022788 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12 Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of IVF0022788 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 30/103 (29.13%), Postives = 52/103 (50.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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