IVF0022331 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATGTCGCTTGAAAACATGACGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTTCGCGAGTCGAAGAGGAAACACAACATGCAAAATTTTGAGATTTTTGAGCCCATTCGCGATGCCATGGACCGCACGAATGACCAGTTGAGGGTCATTGCGAATTGGCCAGATAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGGATAGTGCAAAATGTATGATGGTAATGGCATAG ATGAACATGTCGCTTGAAAACATGACGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTTCATTTTTGAGCCCATTCGCGATGCCATGGACCGCACGAATGACCAGTTGAGGGTCATTGCGAATTGGCCAGATAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGGATAGTGCAAAATGTATGATGGTAATGGCATAG ATGAACATGTCGCTTGAAAACATGACGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTTCATTTTTGAGCCCATTCGCGATGCCATGGACCGCACGAATGACCAGTTGAGGGTCATTGCGAATTGGCCAGATAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGGATAGTGCAAAATGTATGATGGTAATGGCATAG MNMSLENMTSARPSRSSDTKRGFIFEPIRDAMDRTNDQLRVIANWPDRASQKEDALVQEVITQVQSIPQLSVEDSAKCMMVMA Homology
BLAST of IVF0022331 vs. ExPASy TrEMBL
Match: A0A5A7U761 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00710 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.1e-22 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of IVF0022331 vs. ExPASy TrEMBL
Match: A0A5A7T4S2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001800 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of IVF0022331 vs. ExPASy TrEMBL
Match: A0A5D3CM76 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00400 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.9e-11 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of IVF0022331 vs. ExPASy TrEMBL
Match: A0A5A7UMN4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001920 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.4e-08 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of IVF0022331 vs. ExPASy TrEMBL
Match: A0A5D3CVP7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00270 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0
BLAST of IVF0022331 vs. NCBI nr
Match: KAA0051128.1 (hypothetical protein E6C27_scaffold511G00750 [Cucumis melo var. makuwa] >TYJ96774.1 hypothetical protein E5676_scaffold986G00710 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 1.88e-30 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of IVF0022331 vs. NCBI nr
Match: KAA0037993.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 8.18e-16 Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of IVF0022331 vs. NCBI nr
Match: KAA0051928.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK12234.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.11e-15 Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of IVF0022331 vs. NCBI nr
Match: KAA0056454.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK29071.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 4.33e-11 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of IVF0022331 vs. NCBI nr
Match: TYK15318.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 3.31e-10 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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