IVF0021094 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTAAGGAAGGATACAAGTCACCGGTTGAGCAAGTCGTTGAAGGGCCAACGACAAGAGGACGCACTGCACGACGTTCCCTATCGTGGAAGACGATGGCGACATAGAAGAAGGTCGAAGAGCATCTTACTAAGTTGGAGGAGGGATTGGAGGAGATGCAGGCCGAAGTCAACAAGATGAGCGGGTTGATGGAAGAGTTAGTCTAA ATGGCATCTAAGGAAGGATACAAGTCACCGGTTGAGCAAGTCGTTGAAGGGCCAACGACAAGAGGACGCACTGCACGACAGCATCTTACTAAGTTGGAGGAGGGATTGGAGGAGATGCAGGCCGAAGTCAACAAGATGAGCGGGTTGATGGAAGAGTTAGTCTAA ATGGCATCTAAGGAAGGATACAAGTCACCGGTTGAGCAAGTCGTTGAAGGGCCAACGACAAGAGGACGCACTGCACGACAGCATCTTACTAAGTTGGAGGAGGGATTGGAGGAGATGCAGGCCGAAGTCAACAAGATGAGCGGGTTGATGGAAGAGTTAGTCTAA MASKEGYKSPVEQVVEGPTTRGRTARQHLTKLEEGLEEMQAEVNKMSGLMEELV Homology
BLAST of IVF0021094 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.1e-04 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of IVF0021094 vs. ExPASy TrEMBL
Match: A0A5A7SPK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00950 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.1e-04 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of IVF0021094 vs. ExPASy TrEMBL
Match: A0A5D3E2T1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00690 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.1e-04 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of IVF0021094 vs. ExPASy TrEMBL
Match: A0A5D3D3V4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004150 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.1e-04 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of IVF0021094 vs. ExPASy TrEMBL
Match: A0A5A7TFP3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006290 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.1e-04 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of IVF0021094 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus]) HSP 1 Score: 55.5 bits (132), Expect = 4.56e-07 Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of IVF0021094 vs. NCBI nr
Match: TYK30387.1 (uncharacterized protein E5676_scaffold575G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 2.01e-06 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of IVF0021094 vs. NCBI nr
Match: KAA0032830.1 (uncharacterized protein E6C27_scaffold708G00950 [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 2.15e-06 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of IVF0021094 vs. NCBI nr
Match: KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 2.21e-06 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of IVF0021094 vs. NCBI nr
Match: TYK18079.1 (uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]) HSP 1 Score: 53.1 bits (126), Expect = 3.01e-06 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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