IVF0020590 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGAGAGAAAGTACCCGAGGAGAAGGGAGGTGGGGAGTGGAGGAGGAAGAAGAAGGAAAGGAGAAAGAAGGAAGATTGGAGGAGGAGGAAGAAGAAGAGGAAGAAGAAGGGCGACCGTTTCTGGGCATACGTTTCTTGCAGAGGAGGGGAATGGAAGCGAAGGCGGGGACGGCGGAGGAGAGATCATCGACGACGGGTTGCCGGGTTGACCCAACCCAACCCGGTTTAAGGGTATATATATATATACATATAAAAACCCTAAATTAACATTTTTCATTCTCATTTTGCCCCAAACCTTGCACGCAACTCAACCCCTCAGGCCTTCAGCGCTCGCAATCCCTTCGGCATTCAGACCTTCACATTCCGGCAACGTTCAGAACCACTCGCACGTTTCGGCCTTCACATTCCGGCGAACGTTTCGGCCTTTGCTTTCAATCTCACTCTCTCCGTTCAGCGCCACCGCCGCCTCCTACCGGTATTCTCTCGTTCTCCATCTATGTCGTTATTCACTACTACTCATGTTAGAACTTGTGTAACGAAAGAAACAGGATGCTTTTGCTTTACCTATCGGAACAATCTCAGCATATAGTTAGGTTTGATGTTAATATCGAATGCTACTCTGATTTTCTTGGTTTCGTCGATTGATTGATTCTCGTACAGTTTCTTCTTCAAAACCCTAATTTTTTGTTTCTTCCATTGATTCAAACAATTAGGTTTCGAAGCTTCTTCAATTGTGTACCGGTTTTGCACCAAATTAAATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATTAAATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGACAGCGATGCTTGAAACCTTCAAGAAGGTCAGTAAAATTCGCAATCGAACCTTGGAGTTAGTACAATTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTGATTTTTAAGGTTACATGTTTTCTTGTTTTCCCACTTTGATATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGATTGTACTCATCAATCTTAATTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTCTTCACTTAACGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAAAGCAGTTTCTTGAGATTAGAACATCACTTCCAAGC AGAAGAGAGAAAGTACCCGAGGAGAAGGGAGGTGGGGAGTGGAGGAGGAAGAAGAAGGAAAGGAGAAAGAAGGAAGATTGGAGGAGGAGGAAGAAGAAGAGGAAGAAGAAGGGCGACCGTTTCTGGGCATACGTTTCTTGCAGAGGAGGGGAATGGAAGCGAAGGCGGGGACGGCGGAGGAGAGATCATCGACGACGGGTTGCCGGGTTGACCCAACCCAACCCGGTTTAAGGGTATATATATATATACATATAAAAACCCTAAATTAACATTTTTCATTCTCATTTTGCCCCAAACCTTGCACGCAACTCAACCCCTCAGGCCTTCAGCGCTCGCAATCCCTTCGGCATTCAGACCTTCACATTCCGGCAACGTTCAGAACCACTCGCACGTTTCGGCCTTCACATTCCGGCGAACGTTTCGGCCTTTGCTTTCAATCTCACTCTCTCCGTTCAGCGCCACCGCCGCCTCCTACCGGTTTCGAAGCTTCTTCAATTGTGTACCGGTTTTGCACCAAATTAAATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATTAAATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGACAGCGATGCTTGAAACCTTCAAGAAGGTCAGTAAAATTCGCAATCGAACCTTGGAGTTAGTACAATTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTGATTTTTAAGGTTACATGTTTTCTTGTTTTCCCACTTTGATATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGATTGTACTCATCAATCTTAATTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTCTTCACTTAACGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAAAGCAGTTTCTTGAGATTAGAACATCACTTCCAAGC ATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGACAGCGATGCTTGA MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEQIDNVSSTVLEGKDDDGVDGASLDAGDEEEDYEDEDDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRMVHPGVYFATDLANDDDDSSDSDA Homology
BLAST of IVF0020590 vs. ExPASy TrEMBL
Match: A0A5D3E1E7 (Acidic repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3006G00010 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0020590 vs. ExPASy TrEMBL
Match: A0A1S3CIW7 (acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 8.4e-95 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of IVF0020590 vs. ExPASy TrEMBL
Match: A0A0A0KMR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.7e-90 Identity = 188/200 (94.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of IVF0020590 vs. ExPASy TrEMBL
Match: A0A1S3B3S7 (transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN=LOC103485687 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.6e-88 Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of IVF0020590 vs. ExPASy TrEMBL
Match: A0A5D3B8T5 (Transcription initiation factor TFIID subunit 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold282G00010 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.6e-88 Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of IVF0020590 vs. NCBI nr
Match: KAA0066209.1 (acidic repeat-containing protein [Cucumis melo var. makuwa] >TYK29411.1 acidic repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 362 bits (928), Expect = 2.28e-125 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0020590 vs. NCBI nr
Match: XP_008463121.1 (PREDICTED: acidic repeat-containing protein [Cucumis melo]) HSP 1 Score: 357 bits (915), Expect = 2.35e-123 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of IVF0020590 vs. NCBI nr
Match: XP_004150738.1 (nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_023071 [Cucumis sativus]) HSP 1 Score: 341 bits (874), Expect = 3.88e-117 Identity = 188/200 (94.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of IVF0020590 vs. NCBI nr
Match: XP_008441603.1 (PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441604.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441605.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441606.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899453.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899454.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >TYJ95703.1 transcription initiation factor TFIID subunit 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 335 bits (859), Expect = 7.48e-115 Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of IVF0020590 vs. NCBI nr
Match: XP_038906649.1 (pheromone-processing carboxypeptidase KEX1 [Benincasa hispida] >XP_038906650.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]) HSP 1 Score: 290 bits (742), Expect = 4.96e-97 Identity = 171/201 (85.07%), Postives = 177/201 (88.06%), Query Frame = 0
BLAST of IVF0020590 vs. TAIR 10
Match: AT1G12830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 39778 Blast hits to 22088 proteins in 1060 species: Archae - 152; Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants - 2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI BLink). ) HSP 1 Score: 111.7 bits (278), Expect = 6.9e-25 Identity = 98/221 (44.34%), Postives = 136/221 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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