IVF0020416 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAAATTACAAGCAGAAGCAGCTGCAACAATTTAGTTTGTCGTCAAATATAGATGATCAGGTTAAAGACGAAGAAGAAGATGCTTCTTTGGCTTTGTTGATCGAAGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCCCGCCCTATTTCGCTACTAATCTACCCAACAATGCTATGATTCATTCCACAAATAATATCAATTATAAGGAACAAGTAATATTAGATGATTTCCAAGGGATTAATAATGATAATAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGATTCAAGTTCCCTCTTTTTGACTATTTCCCCGGTAATAATGGCACAACCTGA ATGGAAGAAAATTACAAGCAGAAGCAGCTGCAACAATTTAGTTTGTCGTCAAATATAGATGATCAGGTTAAAGACGAAGAAGAAGATGCTTCTTTGGCTTTGTTGATCGAAGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCCCGCCCTATTTCGCTACTAATCTACCCAACAATGCTATGATTCATTCCACAAATAATATCAATTATAAGGAACAAGTAATATTAGATGATTTCCAAGGGATTAATAATGATAATAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGATTCAAGTTCCCTCTTTTTGACTATTTCCCCGGTAATAATGGCACAACCTGA ATGGAAGAAAATTACAAGCAGAAGCAGCTGCAACAATTTAGTTTGTCGTCAAATATAGATGATCAGGTTAAAGACGAAGAAGAAGATGCTTCTTTGGCTTTGTTGATCGAAGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCCCGCCCTATTTCGCTACTAATCTACCCAACAATGCTATGATTCATTCCACAAATAATATCAATTATAAGGAACAAGTAATATTAGATGATTTCCAAGGGATTAATAATGATAATAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGATTCAAGTTCCCTCTTTTTGACTATTTCCCCGGTAATAATGGCACAACCTGA MEENYKQKQLQQFSLSSNIDDQVKDEEEDASLALLIEELKHKAEDHHSHPPPYFATNLPNNAMIHSTNNINYKEQVILDDFQGINNDNNNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFPGNNGTT Homology
BLAST of IVF0020416 vs. ExPASy TrEMBL
Match: A0A5A7UBY7 (B3 domain-containing transcription factor LEC2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007550 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.3e-65 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of IVF0020416 vs. ExPASy TrEMBL
Match: A0A0A0KHN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517430 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51 Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of IVF0020416 vs. ExPASy TrEMBL
Match: A0A6J1IU08 (B3 domain-containing transcription factor LEC2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478581 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.3e-12 Identity = 56/125 (44.80%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of IVF0020416 vs. ExPASy TrEMBL
Match: A0A6J1IQY4 (B3 domain-containing transcription factor LEC2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478581 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.3e-12 Identity = 56/125 (44.80%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of IVF0020416 vs. ExPASy TrEMBL
Match: A0A6J1EJR4 (B3 domain-containing transcription factor LEC2 OS=Cucurbita moschata OX=3662 GN=LOC111433235 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.3e-12 Identity = 61/144 (42.36%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of IVF0020416 vs. NCBI nr
Match: KAA0052680.1 (B3 domain-containing transcription factor LEC2 [Cucumis melo var. makuwa] >TYK13144.1 B3 domain-containing transcription factor LEC2 [Cucumis melo var. makuwa]) HSP 1 Score: 255 bits (651), Expect = 1.50e-85 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of IVF0020416 vs. NCBI nr
Match: KGN49235.1 (hypothetical protein Csa_002728 [Cucumis sativus]) HSP 1 Score: 208 bits (530), Expect = 4.69e-67 Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of IVF0020416 vs. NCBI nr
Match: XP_011658520.1 (B3 domain-containing transcription factor LEC2 [Cucumis sativus]) HSP 1 Score: 208 bits (530), Expect = 2.47e-63 Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of IVF0020416 vs. NCBI nr
Match: KAG7034599.1 (B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 81.6 bits (200), Expect = 4.11e-15 Identity = 59/128 (46.09%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of IVF0020416 vs. NCBI nr
Match: KAG6604454.1 (B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.3 bits (199), Expect = 5.44e-15 Identity = 58/126 (46.03%), Postives = 67/126 (53.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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