IVF0020193 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCCCTTCCCCTTCTTCCCCATTCCTATTCCTTCCCCTTTCCTTCCCCTTCTCTTCCCTTCCCTTCTACTCTATTCTTCTTTCTCCAACCCTTCCCTTCCCTCCCTCCCTTATTAACACCCTCTTCTTACTTCTATCTTAATGGCTGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTTGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGATAATCGCAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGACAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCCGCCGCCACCAAGAGGGCCAGAACTAATTGGGTATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTGGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAGGGATTTTCATGAGTTCTGATCTCAAGAACATGTATCCAAAATTTCAGACATGGCAATGTAAGCTGCTGCATGCCTGAATTAATCTTTGAGCATTTTTGCTGCTAAATTTTCTCGTATCGGACATTGTAGGTTCTTTTGGCAGTCTTTCATATTTCTGATTTTAGTAACTTACATCTTCATCTTCTTCTATACTGCAATTTTCCCCACAAATCTTTTTTCATATCATCGTGAAATCTATATGGTGAAATAAGAGTACCGATAGTGCTTGCTACAAGATACAAAAGAACCAAAAATAAACCATTTCTTGCCGCATTCTGGGATGCGGCTGAACTGATTCCACTGCCTCTAATATAGCGTTTGACCATTCTGATTTCATAGTAATGTCTCTTGGTCTTACATGGAAAGATTCTGCATTTTGTGTTCTCGTCAAAATAGTACAACTACATTAGTCATCTGACCAAGTTTTTCCGCTCTGGGAACTGGAAGCTGATGGTGTAATTGTGGTCTTAAATGTGGTGGCTCCGCTCGTGGGTTTGTTTGCCAAGGAATGCTAGTCCCCAAGGTAGTCTCCATTTCCCAGAGATACGAAGAAATTAGTTGAGCTACAATCTATACTTCATTTTGAAGATTCAGGCCAGTTTTCAGTTTGCTGAAGATTGAAACCCACTCCTTTGGGAAGAGAGTTTCATTTCCCAAATACAAATTGTTGTAGTAACTAGATGTTTGTTTGAGTTGTTGAATCTTTTGAGTATTTTTTTGGTATGTAAACGCTGTGCGCGTCTTCCTCCCTCATTCCCCCCAAATTAGCAGAGGAGAGGGAATGTGGCACTCCCAAATTAATCGATCCCCTAATTCAGCATTTTGTTGGGAATTGAATTTGGCACTCTGTTAATACAACTTGGTCTTATTGTATTTGGCAAATTAGCAGAGGAGAGTATAATTTGGCACTCTCTAATTCAGATTTTTATCGTATTTTGTTCTTTCAAA TTCTTCCCTTCCCCTTCTTCCCCATTCCTATTCCTTCCCCTTTCCTTCCCCTTCTCTTCCCTTCCCTTCTACTCTATTCTTCTTTCTCCAACCCTTCCCTTCCCTCCCTCCCTTATTAACACCCTCTTCTTACTTCTATCTTAATGGCTGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTTGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGATAATCGCAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGACAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCCGCCGCCACCAAGAGGGCCAGAACTAATTGGGTATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTGGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAGGGATTTTCATGAGTTCTGATCTCAAGAACATGTATCCAAAATTTCAGACATGGCAATGTAAGCTGCTGCATGCCTGAATTAATCTTTGAGCATTTTTGCTGCTAAATTTTCTCGTATCGGACATTGTAGGTTCTTTTGGCAGTCTTTCATATTTCTGATTTTAGTAACTTACATCTTCATCTTCTTCTATACTGCAATTTTCCCCACAAATCTTTTTTCATATCATCGTGAAATCTATATGGTGAAATAAGAGTACCGATAGTGCTTGCTACAAGATACAAAAGAACCAAAAATAAACCATTTCTTGCCGCATTCTGGGATGCGGCTGAACTGATTCCACTGCCTCTAATATAGCGTTTGACCATTCTGATTTCATAGTAATGTCTCTTGGTCTTACATGGAAAGATTCTGCATTTTGTGTTCTCGTCAAAATAGTACAACTACATTAGTCATCTGACCAAGTTTTTCCGCTCTGGGAACTGGAAGCTGATGGTGTAATTGTGGTCTTAAATGTGGTGGCTCCGCTCGTGGGTTTGTTTGCCAAGGAATGCTAGTCCCCAAGGTAGTCTCCATTTCCCAGAGATACGAAGAAATTAGTTGAGCTACAATCTATACTTCATTTTGAAGATTCAGGCCAGTTTTCAGTTTGCTGAAGATTGAAACCCACTCCTTTGGGAAGAGAGTTTCATTTCCCAAATACAAATTGTTGTAGTAACTAGATGTTTGTTTGAGTTGTTGAATCTTTTGAGTATTTTTTTGGTATGTAAACGCTGTGCGCGTCTTCCTCCCTCATTCCCCCCAAATTAGCAGAGGAGAGGGAATGTGGCACTCCCAAATTAATCGATCCCCTAATTCAGCATTTTGTTGGGAATTGAATTTGGCACTCTGTTAATACAACTTGGTCTTATTGTATTTGGCAAATTAGCAGAGGAGAGTATAATTTGGCACTCTCTAATTCAGATTTTTATCGTATTTTGTTCTTTCAAA ATGGCTGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTTGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGATAATCGCAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGACAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCCGCCGCCACCAAGAGGGCCAGAACTAATTGGGTATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTGGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAGGGATTTTCATGA MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFSLDNRKDSSAATAKNSKTRPLTNFSSADAEDKENNLDTVAIGSWRLKDSKRRGSAATKRARTNWVSSKHDEGGGGGEADEKYSAGEDVDEGYRDYDIENSESPLKEQSSMHSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS Homology
BLAST of IVF0020193 vs. ExPASy Swiss-Prot
Match: Q9IA00 (Protein bicaudal C homolog 1-A OS=Xenopus laevis OX=8355 GN=bicc1-a PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy Swiss-Prot
Match: Q99MQ1 (Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy Swiss-Prot
Match: Q24009 (Protein bicaudal C OS=Drosophila melanogaster OX=7227 GN=BicC PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.4e-05 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy Swiss-Prot
Match: Q68DC2 (Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKS6 PE=1 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 9.0e-05 Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy Swiss-Prot
Match: Q6GQX6 (Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus OX=10090 GN=Anks6 PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 2.6e-04 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy TrEMBL
Match: A0A5A7UW08 (Protein bicaudal C-1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00200 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.3e-168 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy TrEMBL
Match: E5GBM6 (SAM domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.3e-168 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy TrEMBL
Match: A0A1S3CLT3 (uncharacterized protein LOC103502284 OS=Cucumis melo OX=3656 GN=LOC103502284 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.3e-168 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy TrEMBL
Match: A0A0A0LRM8 (SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000710 PE=4 SV=1) HSP 1 Score: 597.8 bits (1540), Expect = 2.5e-167 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of IVF0020193 vs. ExPASy TrEMBL
Match: A0A6J1BZB7 (uncharacterized protein LOC111007101 OS=Momordica charantia OX=3673 GN=LOC111007101 PE=4 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 8.7e-152 Identity = 285/316 (90.19%), Postives = 293/316 (92.72%), Query Frame = 0
BLAST of IVF0020193 vs. NCBI nr
Match: XP_008464381.1 (PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo] >ADN33866.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0057739.1 Protein bicaudal C-1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 600 bits (1548), Expect = 2.08e-216 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of IVF0020193 vs. NCBI nr
Match: XP_031738774.1 (uncharacterized protein LOC101208783 [Cucumis sativus] >KGN63447.1 hypothetical protein Csa_013418 [Cucumis sativus]) HSP 1 Score: 596 bits (1537), Expect = 9.89e-215 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of IVF0020193 vs. NCBI nr
Match: XP_038879043.1 (uncharacterized protein LOC120071081 [Benincasa hispida]) HSP 1 Score: 562 bits (1449), Expect = 2.86e-201 Identity = 293/310 (94.52%), Postives = 298/310 (96.13%), Query Frame = 0
BLAST of IVF0020193 vs. NCBI nr
Match: XP_022134986.1 (uncharacterized protein LOC111007101 [Momordica charantia]) HSP 1 Score: 545 bits (1403), Expect = 3.65e-194 Identity = 285/316 (90.19%), Postives = 293/316 (92.72%), Query Frame = 0
BLAST of IVF0020193 vs. NCBI nr
Match: XP_022921618.1 (protein bicaudal C homolog 1-A-like [Cucurbita moschata]) HSP 1 Score: 533 bits (1373), Expect = 1.31e-189 Identity = 274/315 (86.98%), Postives = 289/315 (91.75%), Query Frame = 0
BLAST of IVF0020193 vs. TAIR 10
Match: AT3G48800.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51 Identity = 145/331 (43.81%), Postives = 189/331 (57.10%), Query Frame = 0
BLAST of IVF0020193 vs. TAIR 10
Match: AT5G23680.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40 Identity = 137/350 (39.14%), Postives = 182/350 (52.00%), Query Frame = 0
BLAST of IVF0020193 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.4e-05 Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|