IVF0018169 (gene) Melon (IVF77) v1

Overview
NameIVF0018169
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 24014566 .. 24015009 (+)
RNA-Seq ExpressionIVF0018169
SyntenyIVF0018169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACCAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTACAGTATCGAATTGCAACTACTTAGCTGAAAGTTTTGAATAAATGCCGACAAATCGTGGTTTCTGGAGGAGAAAATTGATCTTCGATCTTGGATCGAGGAGTTCACGACGATCTCCGATGAACCCTAGTTGAAATGGCGGTAGAGGGGAAATACTTGTTCCAGAAATTTGTTGGAAATGAGTCACGAGAAAGAGAGAGAGAGAGAGAAGTGGTGTAAACTGGCAGCGTAGCTTCGAGGTTGAATCGGCAATTTACAGTAGCCCAACAGTGTCCCAAGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTAA

mRNA sequence

ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACCAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTACAGTATCGAATTGCAACTACTTAGCTGAAAAGAGAAGTGGTGTAAACTGGCAGCGTAGCTTCGAGGTTGAATCGGCAATTTACAGTAGCCCAACAGTGTCCCAAGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTAA

Coding sequence (CDS)

ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACCAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTACAGTATCGAATTGCAACTACTTAGCTGAAAAGAGAAGTGGTGTAAACTGGCAGCGTAGCTTCGAGGTTGAATCGGCAATTTACAGTAGCCCAACAGTGTCCCAAGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTAA

Protein sequence

MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACTVSNCNYLAEKRSGVNWQRSFEVESAIYSSPTVSQDLRDLAVLCALTGGFRQSYR
Homology
[Close]
BLAST of IVF0018169 vs. ExPASy TrEMBL
Match: A0A0A0LLL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-32
Identity = 74/90 (82.22%), Postives = 75/90 (83.33%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACTVSNCNYLAEKRSGVNWQRSFEVES 60
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPAC VSN NYLA         RSF+ ES
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA---------RSFQAES 60

Query: 61 AIYSSPTVSQDLRDLAVLCALTGGFRQSYR 91
          AIYSSP VS DLRDL VLCALTGGFRQSYR
Sbjct: 61 AIYSSPPVSHDLRDLTVLCALTGGFRQSYR 81

[Close]
BLAST of IVF0018169 vs. NCBI nr
Match: KGN62830.1 (hypothetical protein Csa_022018 [Cucumis sativus])

HSP 1 Score: 145 bits (366), Expect = 2.54e-43
Identity = 74/90 (82.22%), Postives = 75/90 (83.33%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACTVSNCNYLAEKRSGVNWQRSFEVES 60
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPAC VSN NYLA         RSF+ ES
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA---------RSFQAES 60

Query: 61 AIYSSPTVSQDLRDLAVLCALTGGFRQSYR 90
          AIYSSP VS DLRDL VLCALTGGFRQSYR
Sbjct: 61 AIYSSPPVSHDLRDLTVLCALTGGFRQSYR 81

The following BLAST results are available for this feature:
BLAST of IVF0018169 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0018169 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLL14.5e-3282.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1[more]
BLAST of IVF0018169 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62830.12.54e-4382.22hypothetical protein Csa_022018 [Cucumis sativus][more]
BLAST of IVF0018169 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018169.2IVF0018169.2mRNA