IVF0018133 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAGGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTGTTCCCAA GAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAGGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTGTTCCCAA ATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAA MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGLVVVVDSLNFLKVLILEWGFTKFGVFFLCVL Homology
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A5A7UCJ9 (Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00690 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A1S3BI24 (acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A0A0LEM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29 Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A6J1HG59 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111463979 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 79/100 (79.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A6J1ETH1 (acanthoscurrin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437404 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 9.4e-13 Identity = 78/124 (62.90%), Postives = 88/124 (70.97%), Query Frame = 0
BLAST of IVF0018133 vs. NCBI nr
Match: XP_008447334.1 (PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-like [Cucumis melo var. makuwa] >TYJ97692.1 acanthoscurrin-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (401), Expect = 2.22e-47 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of IVF0018133 vs. NCBI nr
Match: XP_038887967.1 (acanthoscurrin-1-like [Benincasa hispida]) HSP 1 Score: 137 bits (344), Expect = 1.01e-38 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of IVF0018133 vs. NCBI nr
Match: XP_011652144.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypothetical protein Csa_000879 [Cucumis sativus]) HSP 1 Score: 137 bits (344), Expect = 1.14e-38 Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of IVF0018133 vs. NCBI nr
Match: XP_023511522.1 (glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101 bits (252), Expect = 5.49e-25 Identity = 80/100 (80.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of IVF0018133 vs. NCBI nr
Match: KAG7011310.1 (hypothetical protein SDJN02_26214, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100 bits (249), Expect = 1.57e-24 Identity = 79/100 (79.00%), Postives = 82/100 (82.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|