IVF0018133 (gene) Melon (IVF77) v1

Overview
NameIVF0018133
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionacanthoscurrin-2-like
Locationchr04: 11310454 .. 11311057 (+)
RNA-Seq ExpressionIVF0018133
SyntenyIVF0018133
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAGGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTGTTCCCAA

mRNA sequence

GAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAGGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTGTTCCCAA

Coding sequence (CDS)

ATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACCAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTTGTAA

Protein sequence

MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGLVVVVDSLNFLKVLILEWGFTKFGVFFLCVL
Homology
BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A5A7UCJ9 (Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00690 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35
Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGL 108
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIG   G+
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGI 107

BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A1S3BI24 (acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35
Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGL 108
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIG   G+
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGI 107

BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A0A0LEM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29
Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0

Query: 1   MANYKLNLMLV--MAMAALALHVAARTAPN-EAAKGLNDQKNFLNYGGVGGFSGIGDGGL 60
           MANYKLNLMLV  MAMAA A HV ART PN +AAKGLNDQKNFLNYGGVGGFSGIGD GL
Sbjct: 1   MANYKLNLMLVMAMAMAAFAFHVTARTVPNDQAAKGLNDQKNFLNYGGVGGFSGIGDSGL 60

Query: 61  PFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGL 108
           PFGGG GGGGLGGGGGLGGLGGG+GGFGGVGIGGIGGGVGGGVIG   G+
Sbjct: 61  PFGGGIGGGGLGGGGGLGGLGGGIGGFGGVGIGGIGGGVGGGVIGGIGGI 110

BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A6J1HG59 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111463979 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18
Identity = 79/100 (79.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query: 1  MANYKLNLMLV--MAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLP 60
          MAN KLNLML+  MAMAA ALHVAARTAP EAAKGLNDQKNFL     GGFSGIGD GLP
Sbjct: 1  MAN-KLNLMLIMAMAMAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLP 60

Query: 61 FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGG 99
          F      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVGG
Sbjct: 61 F------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVGG 89

BLAST of IVF0018133 vs. ExPASy TrEMBL
Match: A0A6J1ETH1 (acanthoscurrin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437404 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.4e-13
Identity = 78/124 (62.90%), Postives = 88/124 (70.97%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMA----ALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGG 60
           MAN    L+LVMAMA    A A  V ARTAPN+ AK ++DQKNF+NYGGVGGFSGIGD G
Sbjct: 42  MAN---ELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSG 101

Query: 61  LPFGG-----GFGG--------GGLGGGGGLGGLGGGVGGF-GGVGIGGIGGGVGGGVIG 107
           LPFGG     GFGG        GGLGGGGGLGGLGGG+GG  GG G+GG+GGG+GG   G
Sbjct: 102 LPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGGGGGLGGLGGGIGGYGGG 161

BLAST of IVF0018133 vs. NCBI nr
Match: XP_008447334.1 (PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-like [Cucumis melo var. makuwa] >TYJ97692.1 acanthoscurrin-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 2.22e-47
Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGL 107
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIG   G+
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGI 107

BLAST of IVF0018133 vs. NCBI nr
Match: XP_038887967.1 (acanthoscurrin-1-like [Benincasa hispida])

HSP 1 Score: 137 bits (344), Expect = 1.01e-38
Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAA A+HVAARTAPNEA KGLNDQKNFLNYGG+GG  GIGD GLPFG
Sbjct: 1   MANYKLNLMLVMAMAAFAVHVAARTAPNEAGKGLNDQKNFLNYGGIGGIGGIGDSGLPFG 60

Query: 61  GG--FGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIG 102
           GG   GGGGLGGGGGLGGLGGG+GG GGVGIGGIGGG+GGGVIG
Sbjct: 61  GGGGIGGGGLGGGGGLGGLGGGIGGVGGVGIGGIGGGIGGGVIG 104

BLAST of IVF0018133 vs. NCBI nr
Match: XP_011652144.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypothetical protein Csa_000879 [Cucumis sativus])

HSP 1 Score: 137 bits (344), Expect = 1.14e-38
Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0

Query: 1   MANYKLNLMLVMAMA--ALALHVAARTAPNE-AAKGLNDQKNFLNYGGVGGFSGIGDGGL 60
           MANYKLNLMLVMAMA  A A HV ART PN+ AAKGLNDQKNFLNYGGVGGFSGIGD GL
Sbjct: 1   MANYKLNLMLVMAMAMAAFAFHVTARTVPNDQAAKGLNDQKNFLNYGGVGGFSGIGDSGL 60

Query: 61  PFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGESVGL 107
           PFGGG GGGGLGGGGGLGGLGGG+GGFGGVGIGGIGGGVGGGVIG   G+
Sbjct: 61  PFGGGIGGGGLGGGGGLGGLGGGIGGFGGVGIGGIGGGVGGGVIGGIGGI 110

BLAST of IVF0018133 vs. NCBI nr
Match: XP_023511522.1 (glycine-rich protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101 bits (252), Expect = 5.49e-25
Identity = 80/100 (80.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query: 1  MANYKLNLMLVMAMA--ALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLP 60
          MAN KLNLML+MAMA  A ALHVAARTAP EAAKGLNDQKNFL+    GGFSGIGD GLP
Sbjct: 1  MAN-KLNLMLIMAMAMAAFALHVAARTAPIEAAKGLNDQKNFLS----GGFSGIGDSGLP 60

Query: 61 FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGG 98
          FGG      LGGGGGLGGLGGG+GGFGGVGIGGIG GVGG
Sbjct: 61 FGG------LGGGGGLGGLGGGLGGFGGVGIGGIGAGVGG 89

BLAST of IVF0018133 vs. NCBI nr
Match: KAG7011310.1 (hypothetical protein SDJN02_26214, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100 bits (249), Expect = 1.57e-24
Identity = 79/100 (79.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query: 1  MANYKLNLMLVMAMA--ALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLP 60
          MAN KLNLML+MAMA  A ALHVAARTAP EAAKGLNDQKNFL     GGFSGIGD GLP
Sbjct: 1  MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLP 60

Query: 61 FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGG 98
          FGG      LGGGGGLGG+GGG+GGFGGVGIGGIG GVGG
Sbjct: 61 FGG------LGGGGGLGGIGGGLGGFGGVGIGGIGAGVGG 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UCJ91.0e-3596.26Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A1S3BI241.0e-3596.26acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1[more]
A0A0A0LEM44.2e-2986.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1[more]
A0A6J1HG594.3e-1879.00glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111463979 PE=4 S... [more]
A0A6J1ETH19.4e-1362.90acanthoscurrin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437404 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008447334.12.22e-4796.26PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-l... [more]
XP_038887967.11.01e-3887.50acanthoscurrin-1-like [Benincasa hispida][more]
XP_011652144.11.14e-3886.36glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypoth... [more]
XP_023511522.15.49e-2580.00glycine-rich protein 5-like [Cucurbita pepo subsp. pepo][more]
KAG7011310.11.57e-2479.00hypothetical protein SDJN02_26214, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34463:SF14GLYCINE-RICH PROTEIN LIKEcoord: 1..106
NoneNo IPR availablePANTHERPTHR34463GLYCINE-RICH PROTEINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018133.1IVF0018133.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane