IVF0017715 (gene) Melon (IVF77) v1

Overview


Name	IVF0017715
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon 17.6
Location	chr05: 17717403 .. 17717834 (+)
RNA-Seq Expression	IVF0017715
Synteny	IVF0017715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGTTCGCGGACTTCCTAGAGAGATTAGTGGAAATTTTCATGGTTGATTTCTTAGTCTTTGGGGACTTTTTCACTGAATGTCTGAATAACTTAGAAGAAGTTTTGAAGACATGCAAAGAGACACAACTCGTGCTTAATTGGGAGAAGTGTTACTTCATGGTAACTGAGGGAATTATGCTTGGGTACAAGATCTCCCATGCGGGATTAGAAGTCGATCCTACAAAGATTGATGTGGTTAGTAAATTGCCACCGTCTTCTGATTTAAAAGCATTGCAAAGCTTTTTGGCACATGTTGGATTTTATAGAAGATTCATTAAAGGATTTTTCCAAATTGTCAAGTCACTGTGCAACTTATTGGGCGCTAGCCAATCCTACATCTTTGATGAGAAGTGCCACCAGGCGTACCAAACATTAAAAGCGCGTTGA

mRNA sequence

ATGGCTCTGTTCGCGGACTTCCTAGAGAGATTAGTGGAAATTTTCATGGTTGATTTCTTAGTCTTTGGGGACTTTTTCACTGAATGTCTGAATAACTTAGAAGAAGTTTTGAAGACATGCAAAGAGACACAACTCGTGCTTAATTGGGAGAAGTGTTACTTCATGGTAACTGAGGGAATTATGCTTGGGTACAAGATCTCCCATGCGGGATTAGAAGTCGATCCTACAAAGATTGATGTGGTTAGTAAATTGCCACCGTCTTCTGATTTAAAAGCATTGCAAAGCTTTTTGGCACATGTTGGATTTTATAGAAGATTCATTAAAGGATTTTTCCAAATTGTCAAGTCACTGTGCAACTTATTGGGCGCTAGCCAATCCTACATCTTTGATGAGAAGTGCCACCAGGCGTACCAAACATTAAAAGCGCGTTGA

Coding sequence (CDS)

ATGGCTCTGTTCGCGGACTTCCTAGAGAGATTAGTGGAAATTTTCATGGTTGATTTCTTAGTCTTTGGGGACTTTTTCACTGAATGTCTGAATAACTTAGAAGAAGTTTTGAAGACATGCAAAGAGACACAACTCGTGCTTAATTGGGAGAAGTGTTACTTCATGGTAACTGAGGGAATTATGCTTGGGTACAAGATCTCCCATGCGGGATTAGAAGTCGATCCTACAAAGATTGATGTGGTTAGTAAATTGCCACCGTCTTCTGATTTAAAAGCATTGCAAAGCTTTTTGGCACATGTTGGATTTTATAGAAGATTCATTAAAGGATTTTTCCAAATTGTCAAGTCACTGTGCAACTTATTGGGCGCTAGCCAATCCTACATCTTTGATGAGAAGTGCCACCAGGCGTACCAAACATTAAAAGCGCGTTGA

Protein sequence

MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYIFDEKCHQAYQTLKAR

Homology

[Close]

BLAST of IVF0017715 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.5e-14
Identity = 43/151 (28.48%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 3   LFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGIML 62
           +  + + ++  +++ D +VF + +     NL  VL +  +  L +N EK +F+ T+   L
Sbjct: 268 ILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFL 327

Query: 63  GYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL-- 122
           GY ++  G++ DP K+  +S++PP + +K L+ FL    +YR+FI+ + ++ K L NL  
Sbjct: 328 GYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTR 387

Query: 123 -----LGASQS----YIFDEKCHQAYQTLKA 143
                + +SQS       DE   Q++  LK+
Sbjct: 388 GLYANIKSSQSSKVPITLDETALQSFNDLKS 418

[Close]

BLAST of IVF0017715 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 14  IFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYKISHAGLEV 73
           ++M D +V G      L NL EV   C+E  L L+ EKC F + E   LG+K +  G+  
Sbjct: 471 LYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILP 530

Query: 74  DPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYIFDEKC 133
           D  K DV+   P   D  + + F+A   +YRRFIK F    + +  L   +  + + ++C
Sbjct: 531 DDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDEC 590

Query: 134 HQAYQTLKAR 144
            +A+  LK++
Sbjct: 591 QKAFIHLKSQ 600

[Close]

BLAST of IVF0017715 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 30  LNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYK--ISHAGLEVDPTKIDVVSKLPPS 89
           +N+L  VL+  ++ Q   N +KC F   +   LG++  IS  G+  DP K++ +   P  
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 90  SDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYIFDEKCHQAYQTLK 142
            +   L+ FL   G+YRRF+K + +IV+ L  LL    S  + E    A++ LK
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL-KKNSLKWTEMAALAFKALK 113

[Close]

BLAST of IVF0017715 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 38/133 (28.57%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 9   ERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYKISH 68
           E  V  +M D L+     +E + ++++VL+  K   L++N  KC F  ++   +GY IS 
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617

Query: 69  AGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYI 128
            G       ID V +     + K L+ FL  V + R+FI    Q+   L NLL     + 
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677

Query: 129 FDEKCHQAYQTLK 142
           +     QA + +K
Sbjct: 678 WTPTQTQAIENIK 690

[Close]

BLAST of IVF0017715 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 38/133 (28.57%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 9   ERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYKISH 68
           E  V  +M D L+     +E + ++++VL+  K   L++N  KC F  ++   +GY IS 
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617

Query: 69  AGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYI 128
            G       ID V +     + K L+ FL  V + R+FI    Q+   L NLL     + 
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677

Query: 129 FDEKCHQAYQTLK 142
           +     QA + +K
Sbjct: 678 WTPTQTQAIENIK 690

[Close]

BLAST of IVF0017715 vs. ExPASy TrEMBL
Match: A0A5D3CAY9 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001870 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.0e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI
Sbjct: 17  MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 76

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL
Sbjct: 77  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 136

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 144
           LGASQSYIFDEKCHQAYQTLKAR
Sbjct: 137 LGASQSYIFDEKCHQAYQTLKAR 159

[Close]

BLAST of IVF0017715 vs. ExPASy TrEMBL
Match: A0A6P5NKQ9 (uncharacterized protein LOC110280449 OS=Arachis duranensis OX=130453 GN=LOC110280449 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42
Identity = 84/143 (58.74%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           +++F+D +E+ +E+FM DF VFGD FT CLN+L  VLK C+ET LVLNWEKC+FMVT GI
Sbjct: 265 LSIFSDMIEKFIEVFMDDFSVFGDSFTSCLNHLALVLKRCQETNLVLNWEKCHFMVTGGI 324

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+KIS+ G+EVD  K++++ KLPP SD+KA++SFL H GFYRRFIK F +I K L NL
Sbjct: 325 VLGHKISNQGIEVDKAKVELIEKLPPPSDVKAIKSFLGHAGFYRRFIKDFSKIAKPLSNL 384

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 144
           L +   +IFDE C  A++ LK R
Sbjct: 385 LVSDTPFIFDETCMLAFEHLKER 407

[Close]

BLAST of IVF0017715 vs. ExPASy TrEMBL
Match: A0A151RWI8 (Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_031494 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.6e-42
Identity = 82/143 (57.34%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           +A+F+D +E+ +E+FM DF VFG  F ECL NLE VL+ C ET L+LNWEKC+FMVTEGI
Sbjct: 4   LAIFSDLVEKSIEVFMDDFSVFGSSFDECLANLEVVLRRCLETNLILNWEKCHFMVTEGI 63

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+KISH G+EVDP K++V+ KLPP  ++K ++SFL HVGFYRRFIK F  I + L NL
Sbjct: 64  VLGHKISHKGIEVDPAKVEVIEKLPPPINVKGIRSFLGHVGFYRRFIKDFSMIARPLSNL 123

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 144
           L     + F++ C +A++ LKAR
Sbjct: 124 LNKDTPFCFNDSCMKAFEALKAR 146

[Close]

BLAST of IVF0017715 vs. ExPASy TrEMBL
Match: A0A6P6GDJ4 (Reverse transcriptase OS=Ziziphus jujuba OX=326968 GN=LOC112492555 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.5e-42
Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 1    MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
            M++F+D +E ++EIFM DF VFGD FT CL NL  VL  CKET LVLNWEKC+FMV EGI
Sbjct: 1011 MSIFSDMVEDIIEIFMDDFSVFGDSFTSCLQNLSRVLLRCKETNLVLNWEKCHFMVQEGI 1070

Query: 61   MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
            +LG+K+S  G+EVD  KI+V+ KLPP + +K ++SFL H GFYRRFIK F +I K LCNL
Sbjct: 1071 VLGHKVSKRGIEVDKAKIEVIEKLPPPTSIKGIRSFLGHAGFYRRFIKDFSKITKPLCNL 1130

Query: 121  LGASQSYIFDEKCHQAYQTLKAR 144
            L     ++FD++C  A+  LK +
Sbjct: 1131 LNKDVPFVFDDECMHAFNLLKEK 1153

[Close]

BLAST of IVF0017715 vs. ExPASy TrEMBL
Match: A0A6P6GGJ1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112492876 OS=Ziziphus jujuba OX=326968 GN=LOC112492876 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-41
Identity = 81/143 (56.64%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           M++F++ +E ++EIFM DF VFGD FT CL NL  +L  CKET LVLNWEKC+FMV EGI
Sbjct: 640 MSIFSNMVEDIIEIFMDDFSVFGDSFTSCLQNLSRLLLRCKETNLVLNWEKCHFMVQEGI 699

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+K+S +G+EVD  KI+V+ KLPP + +K ++SFL HVGFYRRFIK F +I K LCNL
Sbjct: 700 VLGHKVSKSGIEVDKAKIEVIEKLPPPTSIKGIRSFLGHVGFYRRFIKDFSKITKLLCNL 759

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 144
           L     ++FD++C  A+  LK +
Sbjct: 760 LNKDVPFVFDDECMHAFNRLKEK 782

[Close]

BLAST of IVF0017715 vs. NCBI nr
Match: KAA0047720.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] >TYK08374.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 288 bits (737), Expect = 7.05e-98
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI
Sbjct: 17  MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 76

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL
Sbjct: 77  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 136

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 143
           LGASQSYIFDEKCHQAYQTLKAR
Sbjct: 137 LGASQSYIFDEKCHQAYQTLKAR 159

[Close]

BLAST of IVF0017715 vs. NCBI nr
Match: XP_038894606.1 (uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida])

HSP 1 Score: 189 bits (481), Expect = 6.48e-59
Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           MA+F+DFLE+ VE+FM DF VFGD F  CL+NLE +L  C+ET LVLNW+KC+FM+TEGI
Sbjct: 1   MAIFSDFLEKTVEVFMNDFSVFGDSFQSCLDNLEAILTRCEETNLVLNWKKCHFMMTEGI 60

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+K+S AGLEVD  KIDV++KLPPSS++KAL+SFL HVGFYRRF+KGF QI + L  L
Sbjct: 61  VLGHKVSKAGLEVDEAKIDVIAKLPPSSNVKALRSFLGHVGFYRRFVKGFSQIARPLSAL 120

Query: 121 LGASQSYIFDEKCHQAYQTLK 141
           L A++ Y F+E C   ++TLK
Sbjct: 121 LEANRPYDFNEDCCDVFETLK 141

[Close]

BLAST of IVF0017715 vs. NCBI nr
Match: XP_038885905.1 (uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida])

HSP 1 Score: 182 bits (463), Expect = 5.20e-56
Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           MA+F+DFLE++VE+FM DF VFGD F  CL+NL+ VL   +ET LVLNWEKC+FMVTEGI
Sbjct: 1   MAIFSDFLEKIVEVFMDDFSVFGDSFQSCLDNLDVVLACYEETNLVLNWEKCHFMVTEGI 60

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+KIS AGLEVD  KIDV+ KLPPS+++K L+SFL HV FYR+F+KGF QI + L  L
Sbjct: 61  ILGHKISKAGLEVDGAKIDVIVKLPPSANVKTLRSFLGHVNFYRQFVKGFSQIARPLNAL 120

Query: 121 LGASQSYIFDEKCHQAYQTLK 141
           L A+  Y+F+E C  A++TLK
Sbjct: 121 LEANWPYVFNEDCTDAFETLK 141

[Close]

BLAST of IVF0017715 vs. NCBI nr
Match: KYP46923.1 (Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan])

HSP 1 Score: 179 bits (454), Expect = 4.60e-53
Identity = 82/143 (57.34%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           +A+F+D +E+ +E+FM DF VFG  F ECL NLE VL+ C ET L+LNWEKC+FMVTEGI
Sbjct: 4   LAIFSDLVEKSIEVFMDDFSVFGSSFDECLANLEVVLRRCLETNLILNWEKCHFMVTEGI 63

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+KISH G+EVDP K++V+ KLPP  ++K ++SFL HVGFYRRFIK F  I + L NL
Sbjct: 64  VLGHKISHKGIEVDPAKVEVIEKLPPPINVKGIRSFLGHVGFYRRFIKDFSMIARPLSNL 123

Query: 121 LGASQSYIFDEKCHQAYQTLKAR 143
           L     + F++ C +A++ LKAR
Sbjct: 124 LNKDTPFCFNDSCMKAFEALKAR 146

[Close]

BLAST of IVF0017715 vs. NCBI nr
Match: WP_217833188.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 172 bits (437), Expect = 5.81e-52
Identity = 82/141 (58.16%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 1   MALFADFLERLVEIFMVDFLVFGDFFTECLNNLEEVLKTCKETQLVLNWEKCYFMVTEGI 60
           MA+F+D+LE+ VE+FM DF VFG  + ECL NLE VLK C++T LVLNWEKC+FMVTEGI
Sbjct: 2   MAIFSDYLEQSVEVFMDDFSVFGKSYDECLTNLERVLKRCEDTNLVLNWEKCHFMVTEGI 61

Query: 61  MLGYKISHAGLEVDPTKIDVVSKLPPSSDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNL 120
           +LG+KIS  GLEVD  +ID ++KLP  +++K L+SFL H GFYRRFIKGF Q+ K L  L
Sbjct: 62  VLGHKISKVGLEVDQAEIDAIAKLPAPTNVKTLRSFLGHAGFYRRFIKGFSQVAKPLSEL 121

Query: 121 LGASQSYIFDEKCHQAYQTLK 141
           L A++   F+ KC   +++L+
Sbjct: 122 LEANRELNFNGKCLNVFESLR 142

[Close]

BLAST of IVF0017715 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 30  LNNLEEVLKTCKETQLVLNWEKCYFMVTEGIMLGYK--ISHAGLEVDPTKIDVVSKLPPS 89
           +N+L  VL+  ++ Q   N +KC F   +   LG++  IS  G+  DP K++ +   P  
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 90  SDLKALQSFLAHVGFYRRFIKGFFQIVKSLCNLLGASQSYIFDEKCHQAYQTLK 142
            +   L+ FL   G+YRRF+K + +IV+ L  LL    S  + E    A++ LK
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL-KKNSLKWTEMAALAFKALK 113

The following BLAST results are available for this feature:

BLAST of IVF0017715 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	8.5e-14	28.48	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10394	1.1e-13	32.31	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
P92523	1.8e-08	32.46	Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0CT41	1.2e-07	28.57	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-07	28.57	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of IVF0017715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAY9	4.0e-75	100.00	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak...	[more]
A0A6P5NKQ9	2.0e-42	58.74	uncharacterized protein LOC110280449 OS=Arachis duranensis OX=130453 GN=LOC11028...	[more]
A0A151RWI8	2.6e-42	57.34	Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus ca...	[more]
A0A6P6GDJ4	4.5e-42	57.34	Reverse transcriptase OS=Ziziphus jujuba OX=326968 GN=LOC112492555 PE=4 SV=1	[more]
A0A6P6GGJ1	1.0e-41	56.64	LOW QUALITY PROTEIN: uncharacterized protein LOC112492876 OS=Ziziphus jujuba OX=...	[more]

BLAST of IVF0017715 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047720.1	7.05e-98	100.00	Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw...	[more]
XP_038894606.1	6.48e-59	63.83	uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida]	[more]
XP_038885905.1	5.20e-56	63.12	uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida]	[more]
KYP46923.1	4.60e-53	57.34	Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan]	[more]
WP_217833188.1	5.81e-52	58.16	hypothetical protein, partial [Synechococcus sp. PCC 7002]	[more]

BLAST of IVF0017715 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-09	32.46	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..73 e-value: 1.6E-16 score: 62.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 76..143 e-value: 1.9E-14 score: 55.4
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 11..141
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 11..141
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017715.2	IVF0017715.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity