IVF0017060 (gene) Melon (IVF77) v1

Overview
NameIVF0017060
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStress response protein NST1-like
Locationchr06: 15317937 .. 15318152 (-)
RNA-Seq ExpressionIVF0017060
SyntenyIVF0017060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCACAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGGAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

mRNA sequence

ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCACAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGGAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

Coding sequence (CDS)

ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCACAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGGAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

Protein sequence

MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELSEASEIEVPT
Homology
BLAST of IVF0017060 vs. ExPASy TrEMBL
Match: A0A5A7V3K9 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001420 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 60
           MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE
Sbjct: 66  MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 125

Query: 61  LSEASEIEVPT 72
           LSEASEIEVPT
Sbjct: 126 LSEASEIEVPT 136

BLAST of IVF0017060 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-09
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELSEAS 65
           + IL   +W RREENIY GL+DLKP + TM LD+++   KH+KHEA KV++G  E S+  
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK-K 120

Query: 66  EIE 69
           E+E
Sbjct: 121 EVE 122

BLAST of IVF0017060 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-09
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELSE 64
           + IL   +W RREENIY GL+DLKP + TM LD+++   KH+KHEA KV++G  E S+
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK 118

BLAST of IVF0017060 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 8  ILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGK 54
          ILE +EW R++E+IYHGL DLK R+  M LD+DQ  YKH+KH A K
Sbjct: 37 ILEADEWMRQDESIYHGLTDLKSRMGIMRLDDDQPRYKHLKHGAEK 82

BLAST of IVF0017060 vs. ExPASy TrEMBL
Match: A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 3   NAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELS 62
           +A + IL+++E   ++ENI  GL +L+P + TM LD +Q  YKH KH   KV++   E S
Sbjct: 84  DATDFILDIDELMGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEAS 143

Query: 63  EASEIEVPT 72
           +    +VP+
Sbjct: 144 DKEGTQVPS 152

BLAST of IVF0017060 vs. NCBI nr
Match: KAA0060351.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 1.20e-42
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 60
           MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE
Sbjct: 66  MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 125

Query: 61  LSEASEIEVPT 71
           LSEASEIEVPT
Sbjct: 126 LSEASEIEVPT 136

BLAST of IVF0017060 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 2.24e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 3   NAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELS 62
           +  + IL   +W RREENIY GL+DLKP + TM LD+++   KH+KHEA KV++G  E S
Sbjct: 58  STTDSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREAS 117

BLAST of IVF0017060 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 2.25e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 3   NAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELS 62
           +  + IL   +W RREENIY GL+DLKP + TM LD+++   KH+KHEA KV++G  E S
Sbjct: 58  STTDSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREAS 117

BLAST of IVF0017060 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.69e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query: 4  AKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGK 53
              ILE +EW R++E+IYHGL DLK R+  M LD+DQ  YKH+KH A K
Sbjct: 33 VSNSILEADEWMRQDESIYHGLTDLKSRMGIMRLDDDQPRYKHLKHGAEK 82

BLAST of IVF0017060 vs. NCBI nr
Match: XP_008464070.1 (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 53.9 bits (128), Expect = 1.86e-06
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 3   NAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELS 62
           +A + IL+++E   ++ENI  GL +L+P + TM LD +Q  YKH KH   KV++   E S
Sbjct: 84  DATDFILDIDELMGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEAS 143

Query: 63  EASEIEVPT 71
           +    +VP+
Sbjct: 144 DKEGTQVPS 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V3K94.7e-32100.00Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TBU79.5e-0952.38Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DQE79.5e-0953.45Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BXZ21.8e-0760.87Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DPW81.4e-0439.13Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
KAA0060351.11.20e-42100.00stress response protein NST1-like [Cucumis melo var. makuwa][more]
TYK25768.12.24e-1151.67stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0038829.12.25e-1151.67stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0052868.11.69e-1056.00stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ... [more]
XP_008464070.11.86e-0639.13PREDICTED: stress response protein NST1-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017060.1IVF0017060.1mRNA