IVF0016940 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGGACCATACTTTAGGAACTGGAATCAAGTACGAGGCAACAACATCTAAGAATGATGAACAAAGTTATCAAGAAACGTTCCAAAATTTTATGGAATCTATGGAAACAATCCAAATCAAGTCTGATAAAAAGTATAGCATTGAAAGATTAAAAATTTTAGGTGCTACGGTATTTGAAGGATCTCTAGATCCAGCTGATGCAAAAGCATGCTTGATTTAA ATGGAAGAGGACCATACTTTAGGAACTGGAATCAAGTACGAGGCAACAACATCTAAGAATGATGAACAAAGTTATCAAGAAACGTTCCAAAATTTTATGGAATCTATGGAAACAATCCAAATCAAGTCTGATAAAAAGTATAGCATTGAAAGATTAAAAATTTTAGGTGCTACGGTATTTGAAGGATCTCTAGATCCAGCTGATGCAAAAGCATGCTTGATTTAA ATGGAAGAGGACCATACTTTAGGAACTGGAATCAAGTACGAGGCAACAACATCTAAGAATGATGAACAAAGTTATCAAGAAACGTTCCAAAATTTTATGGAATCTATGGAAACAATCCAAATCAAGTCTGATAAAAAGTATAGCATTGAAAGATTAAAAATTTTAGGTGCTACGGTATTTGAAGGATCTCTAGATCCAGCTGATGCAAAAGCATGCTTGATTTAA MEEDHTLGTGIKYEATTSKNDEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACLI Homology
BLAST of IVF0016940 vs. ExPASy TrEMBL
Match: A0A5A7U2K3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001070 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of IVF0016940 vs. ExPASy TrEMBL
Match: A0A5A7V5X4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001720 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of IVF0016940 vs. ExPASy TrEMBL
Match: A0A5D3BPE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00320 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of IVF0016940 vs. NCBI nr
Match: KAA0047659.1 (uncharacterized protein E6C27_scaffold115G001520 [Cucumis melo var. makuwa] >TYK08315.1 uncharacterized protein E5676_scaffold648G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 5.27e-08 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of IVF0016940 vs. NCBI nr
Match: TYK01187.1 (uncharacterized protein E5676_scaffold2044G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 1.55e-07 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of IVF0016940 vs. NCBI nr
Match: KAA0062654.1 (uncharacterized protein E6C27_scaffold79G001720 [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 1.55e-07 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of IVF0016940 vs. NCBI nr
Match: WP_217833179.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 49.3 bits (116), Expect = 1.06e-05 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of IVF0016940 vs. NCBI nr
Match: KAA0063184.1 (uncharacterized protein E6C27_scaffold381G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 50.8 bits (120), Expect = 1.82e-05 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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