IVF0016924 (gene) Melon (IVF77) v1

Overview
NameIVF0016924
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCASP-like protein
Locationchr04: 29681424 .. 29682628 (-)
RNA-Seq ExpressionIVF0016924
SyntenyIVF0016924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAACCCATCTAATTATTCAAACAAATTTTCTCTTTGCATTATTTTTCCTTCTTTAATTCCCAATATGAAGAACTCCGGCGATTCCACTGTCATCGACGTGCCCCCAACTGCTGGCAGCAGCAGCAAAAAGAAAGCGGTTGTTTCCACAGCTGCTCCCCAGCAAGCCAGTGGAGGGGTGAAGCGGGGGCTCTCCATATTCGACTTCGTCATCAGGCTTGGCGCTTTGGGCGCCGCCTTGGGAGCCGCCGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCTACTTTTCAGTGAGTAACTTATTTATACTTAGTACACCAATAATTTGGCTTACTGTTTGAAAATTTTAATTTTGTCTCTATAATTTAATTTTATCTCAAAATTTTATAATCATTGCTATATATATATATATATATATATATATATAATCATATCATATTATGTGAGATTTTCCGTAATAAGGACATGTTTTTTTTAACTCTTTGAAAAAAGTAGTTGTTGTGTAATGTGATATACTGGGTACCATCAATTCTTGGAATTTATTATAATAATACTGTTTTTATTGAATGATATAGGTATGATTGTAGGTTGGGAATTTCTAGTAAGGATTAAAACTTTTGAATTCAATATAATGGTAATAAAGATGTGGTTTTGATGTAGATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGCTCTCTCGTTACCTTTCTCGATCGTTTGCATTGTCCGCCCCGGTGCAGTCGGACTCCGATTGCTTCTTCTCATCCTCGACACCGTATAACTCCGATCAAATTCAATTTCATTAACATTATTATTCTATAATTAACCACTTTCAATGGATATAAGATTCGATATAAGTTTTAAAGTTCACTATATATTTATATACACACATTTTGCAGGTGGTTCTCACATTGGCGACGTCAGCAGCCGCCGCCGCAGCCGCCATAGTGTACCTGGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCGATCTGCGACCAGTTCGAAGATTTTTGCCAGAATATTAGCGGTGCGGTGATCGGCGCTTTCATTGCTGCCCTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTTGCCATCAGAAACACTCACTAAACGCCGCCGGCGGGGGTAGCGGACGTTCAC

mRNA sequence

CAAAACCCATCTAATTATTCAAACAAATTTTCTCTTTGCATTATTTTTCCTTCTTTAATTCCCAATATGAAGAACTCCGGCGATTCCACTGTCATCGACGTGCCCCCAACTGCTGGCAGCAGCAGCAAAAAGAAAGCGGTTGTTTCCACAGCTGCTCCCCAGCAAGCCAGTGGAGGGGTGAAGCGGGGGCTCTCCATATTCGACTTCGTCATCAGGCTTGGCGCTTTGGGCGCCGCCTTGGGAGCCGCCGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCTACTTTTCAATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGCTCTCTCGTTACCTTTCTCGATCGTTTGCATTGTCCGCCCCGGTGCAGTCGGACTCCGATTGCTTCTTCTCATCCTCGACACCGTGGTTCTCACATTGGCGACGTCAGCAGCCGCCGCCGCAGCCGCCATAGTGTACCTGGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCGATCTGCGACCAGTTCGAAGATTTTTGCCAGAATATTAGCGGTGCGGTGATCGGCGCTTTCATTGCTGCCCTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTTGCCATCAGAAACACTCACTAAACGCCGCCGGCGGGGGTAGCGGACGTTCAC

Coding sequence (CDS)

ATGAAGAACTCCGGCGATTCCACTGTCATCGACGTGCCCCCAACTGCTGGCAGCAGCAGCAAAAAGAAAGCGGTTGTTTCCACAGCTGCTCCCCAGCAAGCCAGTGGAGGGGTGAAGCGGGGGCTCTCCATATTCGACTTCGTCATCAGGCTTGGCGCTTTGGGCGCCGCCTTGGGAGCCGCCGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCTACTTTTCAATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGCTCTCTCGTTACCTTTCTCGATCGTTTGCATTGTCCGCCCCGGTGCAGTCGGACTCCGATTGCTTCTTCTCATCCTCGACACCGTGGTTCTCACATTGGCGACGTCAGCAGCCGCCGCCGCAGCCGCCATAGTGTACCTGGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCGATCTGCGACCAGTTCGAAGATTTTTGCCAGAATATTAGCGGTGCGGTGATCGGCGCTTTCATTGCTGCCCTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTTGCCATCAGAAACACTCACTAA

Protein sequence

MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFIAALLMMFLILLSAFAIRNTH
Homology
BLAST of IVF0016924 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.7e-63
Identity = 135/195 (69.23%), Postives = 158/195 (81.03%), Query Frame = 0

Query: 7   STVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAMGT 66
           ST ID+P +  SS  K      AAP +  GG K+G++IFDF++RL A+  AL AAA+MGT
Sbjct: 5   STEIDMPES--SSVSKGTAPLIAAPMKEKGGYKKGIAIFDFILRLAAIATALAAAASMGT 64

Query: 67  SDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLRLL 126
           SDETLPFFTQFFQF+ASYDDLPTFQFF+IAM IVAGYL LSLPFSIV IVRP A G RLL
Sbjct: 65  SDETLPFFTQFFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLL 124

Query: 127 LLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFIAA 186
           L+ILDTV LTL T+A AAAAAIVYLAH+GNSSTNWLAIC QF DFCQ  SGAV+ +FI  
Sbjct: 125 LIILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITV 184

Query: 187 LLMMFLILLSAFAIR 202
           ++ +FL++LSAFA+R
Sbjct: 185 VIFVFLLVLSAFALR 197

BLAST of IVF0016924 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.9e-63
Identity = 131/207 (63.29%), Postives = 166/207 (80.19%), Query Frame = 0

Query: 4   SGDSTVIDVPP---TAGSSSKKKA---VVSTAAPQQASGGVKRGLSIFDFVIRLGALGAA 63
           +G+ST ID+ P    +G   KKK+   +++   P + +  +KRGL+IFDFV+R+G L +A
Sbjct: 3   TGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASA 62

Query: 64  LGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVR 123
           L AAAAMGTS++TLPFFTQFFQFEASYDDLPTFQFF++AM +VAGY+ LS+PFSIVCI+R
Sbjct: 63  LAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIR 122

Query: 124 PGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISG 183
           P A G R+LLLILD+V LTL T+AA AAAA+V LAH GNSSTNWLAIC+QF DFCQ  SG
Sbjct: 123 PHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASG 182

Query: 184 AVIGAFIAALLMMFLILLSAFAIRNTH 205
           AV+G+F A LL + LIL SA +++N+H
Sbjct: 183 AVVGSFAAVLLFLLLILFSALSLKNSH 209

BLAST of IVF0016924 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-61
Identity = 127/196 (64.80%), Postives = 158/196 (80.61%), Query Frame = 0

Query: 6   DSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAMG 65
           +S  ID+P ++  +  K  ++  A  +   GG ++G++IFDF++RL A+  AL AAAAMG
Sbjct: 4   ESAAIDIPESSSVAKGKAPLI--AVSRNEKGGYRKGIAIFDFILRLAAIATALAAAAAMG 63

Query: 66  TSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLRL 125
           TSDETLPFFTQFFQF+ASYDDLPTFQFF+IA+ IV GYL LSLPFSIV IVRP AVG RL
Sbjct: 64  TSDETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAIVRPHAVGPRL 123

Query: 126 LLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFIA 185
           LL+ILD V LTL T+A AAAAAIVYLAH+GNS+TNWLAIC Q+ DFCQ +SGAV+ +FI 
Sbjct: 124 LLIILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAVVASFIT 183

Query: 186 ALLMMFLILLSAFAIR 202
            ++ +FLI+LSAFA+R
Sbjct: 184 VVIFVFLIVLSAFALR 197

BLAST of IVF0016924 vs. ExPASy Swiss-Prot
Match: A7QF77 (Casparian strip membrane protein 2 OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00840 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-61
Identity = 126/201 (62.69%), Postives = 163/201 (81.09%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MK++G++T I++  T  +S+    V +T A Q    G+KRGL+IFDF++RL A+GAAL A
Sbjct: 1   MKSTGEATAINIGETKSASA--TTVATTKAIQHPKAGLKRGLAIFDFILRLSAIGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
              MGT+D+TLPFFTQFFQF+ASYDDLP F FF+IA  I +GYL LSLPFSIVCIVRP A
Sbjct: 61  TTTMGTTDQTLPFFTQFFQFQASYDDLPAFSFFVIANAIASGYLFLSLPFSIVCIVRPHA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           +G RLLL+I DTV++ L  +AAAAAAAIVYLAH+GNS+ NW+AIC QF+DFCQ++SGAV+
Sbjct: 121 MGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAICQQFDDFCQSVSGAVV 180

Query: 181 GAFIAALLMMFLILLSAFAIR 202
            +FIAA+L M +I+LSAF++R
Sbjct: 181 ASFIAAVLFMLMIVLSAFSLR 199

BLAST of IVF0016924 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.9e-61
Identity = 124/197 (62.94%), Postives = 160/197 (81.22%), Query Frame = 0

Query: 7   STVIDVPPTAGSSSKKKA--VVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAM 66
           ST I++P  + + +K KA  + ++++  +  GG K+G++IFDF++RLGA+ +AL AAA M
Sbjct: 2   STTIEIPAESSAVAKGKAPLIGASSSSYEKKGGYKKGIAIFDFILRLGAVISALSAAATM 61

Query: 67  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLR 126
           GTSDETLPFFTQFFQFEA YDD PTFQFF+IAMG V GYL LSLPFS+V I+RP AVG+R
Sbjct: 62  GTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPHAVGIR 121

Query: 127 LLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFI 186
           LLLLILDTV LTL T+AAAAAAAIVYLAH+GN S NWLA+C QF DFCQ +SG V+ +F+
Sbjct: 122 LLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGVVASFV 181

Query: 187 AALLMMFLILLSAFAIR 202
           + L+ + L+++SA A+R
Sbjct: 182 SVLVFLLLVVMSAVALR 198

BLAST of IVF0016924 vs. ExPASy TrEMBL
Match: A0A5D3DPU1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004150 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.4e-99
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 205
           GAFIAALLMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

BLAST of IVF0016924 vs. ExPASy TrEMBL
Match: A0A1S3B7G3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.4e-99
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 205
           GAFIAALLMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

BLAST of IVF0016924 vs. ExPASy TrEMBL
Match: A0A0A0LBG8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 193/204 (94.61%), Postives = 199/204 (97.55%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTA +SSKKKAVVSTAAP QASGGVKRGLSIFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTA-ASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRP A
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQF+DFCQ +SGAVI
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 205
           GAFIAALLMMFL+LLSAF IRNTH
Sbjct: 181 GAFIAALLMMFLVLLSAFGIRNTH 203

BLAST of IVF0016924 vs. ExPASy TrEMBL
Match: A0A6J1G046 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82
Identity = 168/204 (82.35%), Postives = 186/204 (91.18%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNS DSTVIDVPPTAG SSK KA  S A+ Q  +GG+KRGL +FDFV+RLGALGAAL A
Sbjct: 1   MKNSNDSTVIDVPPTAG-SSKSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ALS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VG+RL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQFEDFCQNISGAV+
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 205
           G+F+A LL+MFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

BLAST of IVF0016924 vs. ExPASy TrEMBL
Match: A0A6J1L1G0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 166/204 (81.37%), Postives = 184/204 (90.20%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNS DSTVIDVP T G SSK KA  S A+ Q  +GG+KRGL +FDFV+RLGALGAAL A
Sbjct: 1   MKNSNDSTVIDVPLTTG-SSKSKAAASVASRQANAGGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ALS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VG+RL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQFEDFCQNISGAV+
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 205
           G+F+A LL+MFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

BLAST of IVF0016924 vs. NCBI nr
Match: XP_008442871.1 (PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa] >TYK25280.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 370 bits (949), Expect = 1.94e-128
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 204
           GAFIAALLMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

BLAST of IVF0016924 vs. NCBI nr
Match: XP_004149191.1 (casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical protein Csa_001066 [Cucumis sativus])

HSP 1 Score: 348 bits (894), Expect = 4.53e-120
Identity = 193/204 (94.61%), Postives = 199/204 (97.55%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTA +SSKKKAVVSTAAP QASGGVKRGLSIFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTA-ASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRP A
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQF+DFCQ +SGAVI
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 204
           GAFIAALLMMFL+LLSAF IRNTH
Sbjct: 181 GAFIAALLMMFLVLLSAFGIRNTH 203

BLAST of IVF0016924 vs. NCBI nr
Match: XP_038905871.1 (casparian strip membrane protein 2 [Benincasa hispida])

HSP 1 Score: 345 bits (884), Expect = 1.46e-118
Identity = 192/204 (94.12%), Postives = 199/204 (97.55%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNSGDSTVIDVPPTAGSS KKKAVVSTA P+QA GGVKRGL+IFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSS-KKKAVVSTA-PRQAGGGVKRGLAIFDFVLRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AA+MGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRPGA
Sbjct: 61  AASMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VG+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQFEDFCQ ISGAVI
Sbjct: 121 VGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFEDFCQKISGAVI 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 204
           GAFIAA+LMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAAVLMMFLILLSAFAIRNTH 202

BLAST of IVF0016924 vs. NCBI nr
Match: XP_022945176.1 (casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028124.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313 bits (803), Expect = 3.31e-106
Identity = 168/204 (82.35%), Postives = 186/204 (91.18%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNS DSTVIDVPPTAGSS K KA  S A+ Q  +GG+KRGL +FDFV+RLGALGAAL A
Sbjct: 1   MKNSNDSTVIDVPPTAGSS-KSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ALS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VG+RL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQFEDFCQNISGAV+
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 204
           G+F+A LL+MFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

BLAST of IVF0016924 vs. NCBI nr
Match: XP_023538909.1 (casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308 bits (790), Expect = 3.16e-104
Identity = 166/204 (81.37%), Postives = 184/204 (90.20%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60
           MKNS DSTVIDVPPTAGSS K KA  S A+ Q  +G +KRGL +FDFV+RLGALGAAL A
Sbjct: 1   MKNSNDSTVIDVPPTAGSS-KSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ALS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180
           VG+RL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQFEDFCQNISGAV+
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GAFIAALLMMFLILLSAFAIRNTH 204
           G+F+A LL+MFL+LLSAFAIRN H
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNAH 203

BLAST of IVF0016924 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 222.6 bits (566), Expect = 2.8e-58
Identity = 125/197 (63.45%), Postives = 151/197 (76.65%), Query Frame = 0

Query: 6   DSTVIDVPPTAGSSSKKKA-VVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAM 65
           DS  +DVP  + S  K KA ++  A     SGG KRGLSIFDF++RL A+ AAL AAA M
Sbjct: 4   DSIAVDVPAESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATM 63

Query: 66  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLR 125
           GTSDETLPFFTQF QFEASYDDLPTFQFF++A+ IVAGYL LSLPFS+V IVRP AV  R
Sbjct: 64  GTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPR 123

Query: 126 LLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFI 185
           LLLL+LDT  L L T+AA+AAAAIVYLAH+GN++TNWL IC QF DFCQ  SGAV+ AF 
Sbjct: 124 LLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFA 183

Query: 186 AALLMMFLILLSAFAIR 202
           +   +  L+++S  +++
Sbjct: 184 SVTFLAILVVISGVSLK 200

BLAST of IVF0016924 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 124/204 (60.78%), Postives = 150/204 (73.53%), Query Frame = 0

Query: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAA---PQQASGGVKRGLSIFDFVIRLGALGAA 60
           MKN  +ST IDVP  + S+ K KA +   A       SGG  RGL+IFDF++RL A+ AA
Sbjct: 1   MKN--ESTFIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAA 60

Query: 61  LGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVR 120
           L AAA MGTSDETLPFFTQF QFEASYDDLPTFQFF+IAM +V GYL LSLP S+V I+R
Sbjct: 61  LAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILR 120

Query: 121 PGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISG 180
           P A   RLLLL+LDT VL L T+AA++AAAI YLAH GN +TNWL IC QF DFCQ  SG
Sbjct: 121 PLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 180

Query: 181 AVIGAFIAALLMMFLILLSAFAIR 202
           AV+ AF++ +    L+++S  A++
Sbjct: 181 AVVSAFVSVVFFTILVVISGVALK 202

BLAST of IVF0016924 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 205.7 bits (522), Expect = 3.6e-53
Identity = 122/205 (59.51%), Postives = 150/205 (73.17%), Query Frame = 0

Query: 6   DSTVIDV--PPTAGSSS-------KKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGA 65
           +ST IDV  P T   SS       KKK  V+ A    + GG KRGL+IFDF++RL A+  
Sbjct: 4   ESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVA----SRGGAKRGLAIFDFLLRLAAIAV 63

Query: 66  ALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIV 125
            +GAA+ M T++ETLPFFTQF QF+A YDDLP FQ+F+IA+ +VA YL LSLPFSIV IV
Sbjct: 64  TIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIV 123

Query: 126 RPGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNIS 185
           RP AV  RL+LLI DT+V+TL TSAAAAAA+I YLAH+GN STNWL IC QF DFCQN+S
Sbjct: 124 RPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVS 183

Query: 186 GAVIGAFIAALLMMFLILLSAFAIR 202
            AV+   IA L  + LI++SA A++
Sbjct: 184 TAVVADSIAILFFIVLIIISAIALK 204

BLAST of IVF0016924 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-50
Identity = 106/172 (61.63%), Postives = 133/172 (77.33%), Query Frame = 0

Query: 32  QQASGGVKRGLSIFDFVIRLGALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQ 91
           + +  G KRG++IFDFV+RL A   A+ AAA M T++ETLPFFTQF QF+A Y DLPT  
Sbjct: 49  KMSPAGWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMS 108

Query: 92  FFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYL 151
            F+I   IV GYL LSLPFSIVCI+RP AV  RL L++ DTV++ L   AA+A+AAIVYL
Sbjct: 109 SFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYL 168

Query: 152 AHDGNSSTNWLAICDQFEDFCQNISGAVIGAFIAALLMMFLILLSAFAIRNT 204
           AH+GNSS+NWL +C QF DFCQ  SGAV+ +FIAA L+MFL++LSAFA++ T
Sbjct: 169 AHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKRT 220

BLAST of IVF0016924 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 92/185 (49.73%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 20  SKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGAAAAMGTSDETLPFFTQFFQ 79
           S +  ++ T+   Q SG + R ++I +F++R+ A    +G+A  MGT+ ETLPFFTQF +
Sbjct: 3   SGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIR 62

Query: 80  FEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGAVGLRLLLLILDTVVLTLAT 139
           F+A Y+DLP   FF++A  +V+GYL LSL  + V IV+      R+LL+ILD  +L L T
Sbjct: 63  FQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLT 122

Query: 140 SAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVIGAFIAALLMMFLILLSAFA 199
           S A++AAAIVYLAH+GN+ TNW AIC QF  FC+ ISG++IG+FIA +L++ LILLSA A
Sbjct: 123 SGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIA 182

Query: 200 IRNTH 205
           +   H
Sbjct: 183 LSRRH 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
B9IIR53.7e-6369.23Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_... [more]
P0DI614.9e-6363.29Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1[more]
B9HBX24.5e-6164.80Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_... [more]
A7QF774.5e-6162.69Casparian strip membrane protein 2 OS=Vitis vinifera OX=29760 GN=VIT_06s0080g008... [more]
B9SX125.9e-6162.94Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P... [more]
Match NameE-valueIdentityDescription
A0A5D3DPU14.4e-99100.00CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00... [more]
A0A1S3B7G34.4e-99100.00CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1[more]
A0A0A0LBG81.0e-9294.61CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1[more]
A0A6J1G0463.7e-8282.35CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1[more]
A0A6J1L1G01.2e-8081.37CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_008442871.11.94e-128100.00PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 caspa... [more]
XP_004149191.14.53e-12094.61casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical pr... [more]
XP_038905871.11.46e-11894.12casparian strip membrane protein 2 [Benincasa hispida][more]
XP_022945176.13.31e-10682.35casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Caspa... [more]
XP_023538909.13.16e-10481.37casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G06200.12.8e-5863.45Uncharacterised protein family (UPF0497) [more]
AT3G11550.11.7e-5560.78Uncharacterised protein family (UPF0497) [more]
AT2G36100.13.6e-5359.51Uncharacterised protein family (UPF0497) [more]
AT2G27370.12.8e-5061.63Uncharacterised protein family (UPF0497) [more]
AT5G15290.11.1e-4149.73Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 47..199
e-value: 4.9E-43
score: 144.6
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 40..188
e-value: 3.5E-46
score: 156.7
NoneNo IPR availablePANTHERPTHR11615:SF332CASP-LIKE PROTEINcoord: 14..203
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 14..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016924.1IVF0016924.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007043 cell-cell junction assembly
biological_process GO:0042545 cell wall modification
cellular_component GO:0048226 Casparian strip
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding