IVF0016402 (gene) Melon (IVF77) v1

Overview


Name	IVF0016402
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PMD domain-containing protein
Location	chr08: 10291684 .. 10292412 (-)
RNA-Seq Expression	IVF0016402
Synteny	IVF0016402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTACGTCCATGGCTGGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCCACAGAAGTTCAAGGTTCCAAAATGACTAACTTTTCCGACGAAGGCGGATCTATTTATTTTGGCGAATATGAGGCGCTAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACGCTAACCTCCCGAACAGGAATAAACACGAATGCATGGTTGATACCCATGATTCATCATTTCTGCAGACTTCTTATTTTGTGAGCATGCGTTCCTGCTATTAGTTCCCTCGCTGTGGAAATACTTGGATCATAACATCATATAGTCCGTATCGATTTGGATGGCAATTTGGCTTTTACCAGGACATCCCTAATGCTTTAGGGGGCATGCCACCTCTGATCACACCAGATAATATGTTACACCACTGGAGGATATGTACGAGGCGTAATACTTTATCTGAGTTATACTTGTCCGCCCATTCGTTAGAGCCTTGCAAGCATGTGACACAGCGATTCACAGACTGGTGGGCCATGAAGCACGAGATCTATTTTGAGGATAACATACATCATCTGGTGAGTAGTGTCATTCCTCCCCCTTCACAACCTAATCTACCCAAGAACCGAGGAAGCAACCTGGGTGATAAAGAAATTCGCCTGGTTGAGGCGATGGTTGCTACTCTCGAAGATGAGATAAATGAGCATAAAGGTGAGAGCGATAGCATAAAAAATGATCGTCGTTAA

mRNA sequence

ATGCATTACGTCCATGGCTGGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCCACAGAAGTTCAAGGTTCCAAAATGACTAACTTTTCCGACGAAGGCGGATCTATTTATTTTGGCGAATATGAGGCGCTAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACGCTAACCTCCCGAACAGGAATAAACACGAATGCATGGTTGATACCCATGATTCATCATTTCTGCAGACTTCTTATTTTGTGAGCATGCGTTCCTGCTATTATCCGTATCGATTTGGATGGCAATTTGGCTTTTACCAGGACATCCCTAATGCTTTAGGGGGCATGCCACCTCTGATCACACCAGATAATATGTTACACCACTGGAGGATATGTACGAGGCGTAATACTTTATCTGAGTTATACTTGTCCGCCCATTCGTTAGAGCCTTGCAAGCATGTGACACAGCGATTCACAGACTGGTGGGCCATGAAGCACGAGATCTATTTTGAGGATAACATACATCATCTGGTGAGTAGTGTCATTCCTCCCCCTTCACAACCTAATCTACCCAAGAACCGAGGAAGCAACCTGGGTGATAAAGAAATTCGCCTGGTTGAGGCGATGGTTGCTACTCTCGAAGATGAGATAAATGAGCATAAAGGTGAGAGCGATAGCATAAAAAATGATCGTCGTTAA

Coding sequence (CDS)

ATGCATTACGTCCATGGCTGGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCCACAGAAGTTCAAGGTTCCAAAATGACTAACTTTTCCGACGAAGGCGGATCTATTTATTTTGGCGAATATGAGGCGCTAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACGCTAACCTCCCGAACAGGAATAAACACGAATGCATGGTTGATACCCATGATTCATCATTTCTGCAGACTTCTTATTTTGTGAGCATGCGTTCCTGCTATTATCCGTATCGATTTGGATGGCAATTTGGCTTTTACCAGGACATCCCTAATGCTTTAGGGGGCATGCCACCTCTGATCACACCAGATAATATGTTACACCACTGGAGGATATGTACGAGGCGTAATACTTTATCTGAGTTATACTTGTCCGCCCATTCGTTAGAGCCTTGCAAGCATGTGACACAGCGATTCACAGACTGGTGGGCCATGAAGCACGAGATCTATTTTGAGGATAACATACATCATCTGGTGAGTAGTGTCATTCCTCCCCCTTCACAACCTAATCTACCCAAGAACCGAGGAAGCAACCTGGGTGATAAAGAAATTCGCCTGGTTGAGGCGATGGTTGCTACTCTCGAAGATGAGATAAATGAGCATAAAGGTGAGAGCGATAGCATAAAAAATGATCGTCGTTAA

Protein sequence

MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDRR

Homology

[Close]

BLAST of IVF0016402 vs. ExPASy TrEMBL
Match: A0A5A7SIG6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002830 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 212/233 (90.99%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL
Sbjct: 115 MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 174

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
           PNRNKHECMVDTHDSSFLQTSYFVSMR CY               PYRFGWQFGFYQDIP
Sbjct: 175 PNRNKHECMVDTHDSSFLQTSYFVSMRFCYLFPRCGNTWIITSYSPYRFGWQFGFYQDIP 234

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHE YF
Sbjct: 235 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHETYF 294

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE 220
           EDNIHHLVSS IPPPSQPNLPKNRGSNLGDKEI LVEAMVATLEDEI EHKG+
Sbjct: 295 EDNIHHLVSSAIPPPSQPNLPKNRGSNLGDKEICLVEAMVATLEDEIKEHKGD 347

[Close]

BLAST of IVF0016402 vs. ExPASy TrEMBL
Match: A0A5D3C1C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00050 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 198/219 (90.41%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL
Sbjct: 70  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 129

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFGFYQDIPNALGGMPPLITPDN 120
           PNRNKHECMVDTHDSSFLQTSYF                    DIPNALGGMPPLITPDN
Sbjct: 130 PNRNKHECMVDTHDSSFLQTSYF--------------------DIPNALGGMPPLITPDN 189

Query: 121 MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP 180
           MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP
Sbjct: 190 MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP 249

Query: 181 PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE 220
           PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKG+
Sbjct: 250 PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGD 268

[Close]

BLAST of IVF0016402 vs. ExPASy TrEMBL
Match: A0A5D3D2A0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003250 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.9e-113
Identity = 194/241 (80.50%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVH WLAHYFGTHYPLPTEV+G KMTNF DEGGSIYFGEYEA ELIHNG RIQWHANL
Sbjct: 333 MHYVHDWLAHYFGTHYPLPTEVRGPKMTNFFDEGGSIYFGEYEARELIHNGTRIQWHANL 392

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
           PN+NKHECMVDTHDSSFLQTSYFVSMRSCY                YRFGWQF F+QDIP
Sbjct: 393 PNKNKHECMVDTHDSSFLQTSYFVSMRSCYLFSRCGNTWIITSYSLYRFGWQFCFFQDIP 452

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +  MPP ITPDNMLHHWRICTR NTL+ELYL A SLEPCKHVTQRFTDWW+M+H  YF
Sbjct: 453 NDIEAMPPAITPDNMLHHWRICTRHNTLTELYLPARSLEPCKHVTQRFTDWWSMRHGTYF 512

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 228
           EDNIHHLVSSVIPPPSQP LPKNRG+NLG KEIRLVEAM ATLE+EINEHK E+DS K+D
Sbjct: 513 EDNIHHLVSSVIPPPSQPKLPKNRGTNLGGKEIRLVEAMAATLEEEINEHKDETDSSKSD 572

[Close]

BLAST of IVF0016402 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-107
Identity = 189/241 (78.42%), Postives = 199/241 (82.57%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEV+G KMTNFSDEGGSIYFGEYEA ELIHNGARIQWHA+L
Sbjct: 359 MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASL 418

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
            NR+KHE MVDTHDSSFLQTSYFVSMRSCY               PYRFG QFGFYQD+P
Sbjct: 419 QNRSKHERMVDTHDSSFLQTSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLP 478

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +GGM P IT DN+L+HWRICTRRNTLSELYL A SLEPCKHVTQRFTDWW  KH  YF
Sbjct: 479 NDIGGMSPAITLDNILYHWRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYF 538

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 228
           EDN HHLVSS IPP SQP LPKNRGSNLG KEIRLVEAM   LE+E+ E K ESDS K+D
Sbjct: 539 EDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKERKDESDSSKSD 598

[Close]

BLAST of IVF0016402 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.0e-106
Identity = 189/241 (78.42%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLP EV+G KMTNFS EGGSIYFGEYEA ELIHNG RIQWHANL
Sbjct: 393 MHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANL 452

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
            NRNKHE MVDTHDSSFLQ SYFVSMRSCY               PYRFG QFGFYQD+P
Sbjct: 453 HNRNKHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLP 512

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +GGMPP IT DN+L+HWRIC RRNTLSELYL   SLEPCKHVTQRFTDWW  KH  YF
Sbjct: 513 NDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEPCKHVTQRFTDWWTTKHMNYF 572

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 228
           EDN HHLVSS IPPPSQP LPKNRGSNLG KEIRLVEAM   LEDE+NEH  ESDS K+D
Sbjct: 573 EDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEH--ESDSNKSD 631

[Close]

BLAST of IVF0016402 vs. NCBI nr
Match: KAA0025968.1 (hypothetical protein E6C27_scaffold34G002830 [Cucumis melo var. makuwa])

HSP 1 Score: 450 bits (1157), Expect = 6.10e-153
Identity = 212/233 (90.99%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL
Sbjct: 115 MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 174

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
           PNRNKHECMVDTHDSSFLQTSYFVSMR CY               PYRFGWQFGFYQDIP
Sbjct: 175 PNRNKHECMVDTHDSSFLQTSYFVSMRFCYLFPRCGNTWIITSYSPYRFGWQFGFYQDIP 234

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHE YF
Sbjct: 235 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHETYF 294

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE 219
           EDNIHHLVSS IPPPSQPNLPKNRGSNLGDKEI LVEAMVATLEDEI EHKG+
Sbjct: 295 EDNIHHLVSSAIPPPSQPNLPKNRGSNLGDKEICLVEAMVATLEDEIKEHKGD 347

[Close]

BLAST of IVF0016402 vs. NCBI nr
Match: TYK04206.1 (hypothetical protein E5676_scaffold24967G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1070), Expect = 2.45e-141
Identity = 198/219 (90.41%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL
Sbjct: 70  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 129

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFGFYQDIPNALGGMPPLITPDN 120
           PNRNKHECMVDTHDSSFLQTSYF                    DIPNALGGMPPLITPDN
Sbjct: 130 PNRNKHECMVDTHDSSFLQTSYF--------------------DIPNALGGMPPLITPDN 189

Query: 121 MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP 180
           MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP
Sbjct: 190 MLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPP 249

Query: 181 PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE 219
           PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKG+
Sbjct: 250 PSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGD 268

[Close]

BLAST of IVF0016402 vs. NCBI nr
Match: KAA0042070.1 (hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa] >TYK18012.1 hypothetical protein E5676_scaffold306G003250 [Cucumis melo var. makuwa])

HSP 1 Score: 412 bits (1058), Expect = 1.01e-135
Identity = 194/241 (80.50%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVH WLAHYFGTHYPLPTEV+G KMTNF DEGGSIYFGEYEA ELIHNG RIQWHANL
Sbjct: 333 MHYVHDWLAHYFGTHYPLPTEVRGPKMTNFFDEGGSIYFGEYEARELIHNGTRIQWHANL 392

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
           PN+NKHECMVDTHDSSFLQTSYFVSMRSCY                YRFGWQF F+QDIP
Sbjct: 393 PNKNKHECMVDTHDSSFLQTSYFVSMRSCYLFSRCGNTWIITSYSLYRFGWQFCFFQDIP 452

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +  MPP ITPDNMLHHWRICTR NTL+ELYL A SLEPCKHVTQRFTDWW+M+H  YF
Sbjct: 453 NDIEAMPPAITPDNMLHHWRICTRHNTLTELYLPARSLEPCKHVTQRFTDWWSMRHGTYF 512

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 227
           EDNIHHLVSSVIPPPSQP LPKNRG+NLG KEIRLVEAM ATLE+EINEHK E+DS K+D
Sbjct: 513 EDNIHHLVSSVIPPPSQPKLPKNRGTNLGGKEIRLVEAMAATLEEEINEHKDETDSSKSD 572

[Close]

BLAST of IVF0016402 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1007), Expect = 1.49e-127
Identity = 189/241 (78.42%), Postives = 199/241 (82.57%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEV+G KMTNFSDEGGSIYFGEYEA ELIHNGARIQWHA+L
Sbjct: 359 MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASL 418

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
            NR+KHE MVDTHDSSFLQTSYFVSMRSCY               PYRFG QFGFYQD+P
Sbjct: 419 QNRSKHERMVDTHDSSFLQTSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLP 478

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +GGM P IT DN+L+HWRICTRRNTLSELYL A SLEPCKHVTQRFTDWW  KH  YF
Sbjct: 479 NDIGGMSPAITLDNILYHWRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYF 538

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 227
           EDN HHLVSS IPP SQP LPKNRGSNLG KEIRLVEAM   LE+E+ E K ESDS K+D
Sbjct: 539 EDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKERKDESDSSKSD 598

[Close]

BLAST of IVF0016402 vs. NCBI nr
Match: ADN34118.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 383 bits (984), Expect = 2.03e-126
Identity = 185/241 (76.76%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 1   MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANL 60
           MHYVHGWLAHYFGTHYPLPTEV+G KMTNFS EGGSIYFGEYEA ELIHNGARIQWHANL
Sbjct: 126 MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANL 185

Query: 61  PNRNKHECMVDTHDSSFLQTSYFVSMRSCYY--------------PYRFGWQFGFYQDIP 120
            NR+KHE MVDTHDSSFLQ SYFVSMRSCY               PYR G QFGFYQD+P
Sbjct: 186 QNRSKHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTWIITSYSPYRLGRQFGFYQDLP 245

Query: 121 NALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYF 180
           N +GGMPP IT DN+L+HWRICTRR TL ELYL   SLEPCKHVTQRFTDWW  KH  YF
Sbjct: 246 NDIGGMPPAITLDNILYHWRICTRRYTLFELYLPVRSLEPCKHVTQRFTDWWTTKHMTYF 305

Query: 181 EDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKND 227
           EDN HHLVSS I PPSQP LPKNRGSNLG KEI LVEAM   LE+E+ EHK ESDS K+D
Sbjct: 306 EDNRHHLVSSAISPPSQPRLPKNRGSNLGGKEIGLVEAMAPNLEEEVKEHKDESDSSKSD 365

The following BLAST results are available for this feature:

BLAST of IVF0016402 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIG6	1.5e-124	90.99	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3C1C3	3.1e-114	90.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D2A0	5.9e-113	80.50	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TX42	4.9e-107	78.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UGW6	7.0e-106	78.42	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of IVF0016402 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025968.1	6.10e-153	90.99	hypothetical protein E6C27_scaffold34G002830 [Cucumis melo var. makuwa]	[more]
TYK04206.1	2.45e-141	90.41	hypothetical protein E5676_scaffold24967G00050 [Cucumis melo var. makuwa]	[more]
KAA0042070.1	1.01e-135	80.50	hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa] >TYK1801...	[more]
KAA0047478.1	1.49e-127	78.42	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
ADN34118.1	2.03e-126	76.76	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of IVF0016402 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..226
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 2..187
None	No IPR available	PANTHER	PTHR36607:SF20	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 2..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016402.1	IVF0016402.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane