IVF0015775 (gene) Melon (IVF77) v1

Overview


Name	IVF0015775
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein IDA
Location	chr09: 19457349 .. 19458048 (-)
RNA-Seq Expression	IVF0015775
Synteny	IVF0015775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCCCCACTTTTCCCTCAACAAAAAAATCCCCAATTTTCTCTCATATCTCATGGCCTCCTCCTCCTCCTCCATCTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTCCCGTCAACCACAATGGCGGAGCCGTTGTCTCGCAATACCCACCTCACCACCGCCTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGCCCCATTCCGCCTTCCGCTCCTTCGAAAAGACACAACTCGGTCGTCAACTCAGCCCCACTCAACTGAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACTCGTCCTTAATTTGGAGCATTTTTTTCCCCCAACAACGTCTGTGATCTAATCTAAGATCCTAATTGCAATCTACAGGCTCCTTTTCTTTTCTCTTTTCTCTTTTTTGAAAAAAAAAAAAAGAAACATATATATATATATATTTATATGTAGAGTTATAGATATAGTGTGTGTATACAAAATTCCATTTGTTTATATGTGAAAGAGGTTCTTAATTTTCTTTCTTTGTTGATTATTTATGGCACTTTCCTTAACGATTATTCAATTTTATCAATTAATTCACAGGTAGGGAATTCGAATTGTAGTAGTTATGATCCATGTATGATTTTTATCTTTGGGTTGAAATTAATAATGAATTGCCCTA

mRNA sequence

CATTCCCCACTTTTCCCTCAACAAAAAAATCCCCAATTTTCTCTCATATCTCATGGCCTCCTCCTCCTCCTCCATCTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTCCCGTCAACCACAATGGCGGAGCCGTTGTCTCGCAATACCCACCTCACCACCGCCTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGCCCCATTCCGCCTTCCGCTCCTTCGAAAAGACACAACTCGGTCGTCAACTCAGCCCCACTCAACTGAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACTCGTCCTTAATTTGGAGCATTTTTTTCCCCCAACAACGTCTGTGATCTAATCTAAGATCCTAATTGCAATCTACAGGCTCCTTTTCTTTTCTCTTTTCTCTTTTTTGAAAAAAAAAAAAAGAAACATATATATATATATATTTATATGTAGAGTTATAGATATAGTGTGTGTATACAAAATTCCATTTGTTTATATGTGAAAGAGGTTCTTAATTTTCTTTCTTTGTTGATTATTTATGGCACTTTCCTTAACGATTATTCAATTTTATCAATTAATTCACAGGTAGGGAATTCGAATTGTAGTAGTTATGATCCATGTATGATTTTTATCTTTGGGTTGAAATTAATAATGAATTGCCCTA

Coding sequence (CDS)

ATGGCCTCCTCCTCCTCCTCCATCTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTCCCGTCAACCACAATGGCGGAGCCGTTGTCTCGCAATACCCACCTCACCACCGCCTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGCCCCATTCCGCCTTCCGCTCCTTCGAAAAGACACAACTCGGTCGTCAACTCAGCCCCACTCAACTGA

Protein sequence

MASSSSSIFFIFLLILPLPNFTTARPFPSTTMAEPLSRNTHLTTAFRFNHQIFSFLPKGPIPPSAPSKRHNSVVNSAPLN

Homology

[Close]

BLAST of IVF0015775 vs. ExPASy Swiss-Prot
Match: Q8LAD7 (Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-05
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 49 NHQIFSFLPKG-PIPPSAPSKRHNSVVNSAP 79
          N  IF +LPKG PIPPSAPSKRHNS VNS P
Sbjct: 46 NSHIFGYLPKGVPIPPSAPSKRHNSFVNSLP 76

[Close]

BLAST of IVF0015775 vs. ExPASy TrEMBL
Match: A0A0A0KPP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577390 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.4e-31
Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 4  SSSSIFFIFLLILPLPNFTTARPFPSTTMAEPLSRNTHLTTAFRFNHQIFSFLPKGPIPP 63
          +SSSIFFI LLILPLPNFTTARPFP+TTM EP S NTHLTTAFRFNHQIFSFLPKGPIPP
Sbjct: 2  ASSSIFFILLLILPLPNFTTARPFPATTMTEPSSHNTHLTTAFRFNHQIFSFLPKGPIPP 61

Query: 64 SAPSKRHNSVVNSAPLN 81
          SAPSKRHNS++NSAPLN
Sbjct: 62 SAPSKRHNSLINSAPLN 78

[Close]

BLAST of IVF0015775 vs. ExPASy TrEMBL
Match: A0A5D3CCP4 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00620 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 2   ASSSSSIFF------IFLLILPLPNFTTARPFPSTTMAEP-LSRNTHLTTAFRFNHQIFS 61
           +SSSSS  F      IF+L+L L +  ++   P  TM  P +S + + TTAFR+  Q F 
Sbjct: 16  SSSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFG 75

Query: 62  FLPKG-PIPPSAPSKRHNSVVNSAPLN 81
           FLPKG PIPPS PS RHNSVV+S P N
Sbjct: 76  FLPKGVPIPPSGPSDRHNSVVDSLPPN 102

[Close]

BLAST of IVF0015775 vs. ExPASy TrEMBL
Match: A0A5A7SV51 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005330 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 2  ASSSSSIFF------IFLLILPLPNFTTARPFPSTTMAEP-LSRNTHLTTAFRFNHQIFS 61
          +SSSSS  F      IF+L+L L +  ++   P  TM  P +S + + TTAFR+  Q F 
Sbjct: 12 SSSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFG 71

Query: 62 FLPKG-PIPPSAPSKRHNSVVNSAPLN 81
          FLPKG PIPPS PS RHNSVV+S P N
Sbjct: 72 FLPKGVPIPPSGPSDRHNSVVDSLPPN 98

[Close]

BLAST of IVF0015775 vs. ExPASy TrEMBL
Match: A0A0A0KR07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06
Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 1  MASSSSS----IFFIFLLILPLPNFTTA-RPFPSTTMAE--PLSRNTHLTTAFRFNHQIF 60
          M SSSS     IF + LL+L L   ++A RP  +    E  P   N++  TAFR+  Q F
Sbjct: 1  MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSY-KTAFRYGGQTF 60

Query: 61 SFLPKG-PIPPSAPSKRHNSVVNSAPLN 81
          SFLPKG PIPPS PS RHNSVV+S P N
Sbjct: 61 SFLPKGVPIPPSGPSDRHNSVVDSLPPN 87

[Close]

BLAST of IVF0015775 vs. ExPASy TrEMBL
Match: A0A2P6R1Y4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0436131 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.5e-06
Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 1   MASSSSS----------IFFIFLLILPLPNFTTARP-----------FPSTTMAEPLSRN 60
           MASSSSS          + F+FL++L + +    R            + +    + L+  
Sbjct: 1   MASSSSSSSSSCSKSKYLSFLFLVLLLIGSCAATRQGKTLVDHDQRVYMNMEHTKELNLK 60

Query: 61  THLTTAFRFNHQIFSFLPKG-PIPPSAPSKRHNSVVNSAPLN 81
            H  TAFRF  +IFSF PKG P+PPS PSKRHNSVVNS P N
Sbjct: 61  KH-QTAFRFRGEIFSFFPKGSPVPPSGPSKRHNSVVNSTPKN 101

[Close]

BLAST of IVF0015775 vs. NCBI nr
Match: KGN51548.1 (hypothetical protein Csa_008377 [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 3.53e-42
Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 4  SSSSIFFIFLLILPLPNFTTARPFPSTTMAEPLSRNTHLTTAFRFNHQIFSFLPKGPIPP 63
          +SSSIFFI LLILPLPNFTTARPFP+TTM EP S NTHLTTAFRFNHQIFSFLPKGPIPP
Sbjct: 2  ASSSIFFILLLILPLPNFTTARPFPATTMTEPSSHNTHLTTAFRFNHQIFSFLPKGPIPP 61

Query: 64 SAPSKRHNSVVNSAPLN 80
          SAPSKRHNS++NSAPLN
Sbjct: 62 SAPSKRHNSLINSAPLN 78

[Close]

BLAST of IVF0015775 vs. NCBI nr
Match: KAG6579701.1 (hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 1.29e-13
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 4   SSSSIFFIFLLILPLPNFTTARPFPSTTMAEPLSRNTHLTTAFRFNHQIFSFLPKG-PIP 63
           S++S+ F FLL L L  F++ARP P+T          +  TAFRF+HQ+FSFLPKG PIP
Sbjct: 52  SNASLLFFFLLTLLL-GFSSARPAPATMAGTSFFPAPN--TAFRFHHQVFSFLPKGTPIP 111

Query: 64  PSAPSKRHNSVVN 75
           PSAPSKRHNSVV+
Sbjct: 112 PSAPSKRHNSVVD 121

[Close]

BLAST of IVF0015775 vs. NCBI nr
Match: KAG6601760.1 (hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 1.94e-12
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 2  ASSSSSIFFIFLLILPLPNFTTARPFPSTTMAEPLSRNTHLTTAFRFNHQIFSFLPKG-P 61
          A S++SI F+ LLIL LP FT+ARP P+T          +   A +F  Q FSFLP+G P
Sbjct: 4  ALSNTSISFLLLLIL-LPPFTSARPPPATMPTHNFLPTPN--AAIQFQRQFFSFLPRGVP 63

Query: 62 IPPSAPSKRHNSVVNSA 77
          IPPSAPSKRHNSV++SA
Sbjct: 64 IPPSAPSKRHNSVLHSA 77

[Close]

BLAST of IVF0015775 vs. NCBI nr
Match: KAA0034518.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 4.97e-11
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 2  ASSSSSIFF------IFLLILPLPNFTTARPFPSTTMAEP-LSRNTHLTTAFRFNHQIFS 61
          +SSSSS  F      IF+L+L L +  ++   P  TM  P +S + + TTAFR+  Q F 
Sbjct: 12 SSSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFG 71

Query: 62 FLPKG-PIPPSAPSKRHNSVVNSAPLN 80
          FLPKG PIPPS PS RHNSVV+S P N
Sbjct: 72 FLPKGVPIPPSGPSDRHNSVVDSLPPN 98

[Close]

BLAST of IVF0015775 vs. NCBI nr
Match: TYK09072.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 5.48e-11
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 2   ASSSSSIFF------IFLLILPLPNFTTARPFPSTTMAEP-LSRNTHLTTAFRFNHQIFS 61
           +SSSSS  F      IF+L+L L +  ++   P  TM  P +S + + TTAFR+  Q F 
Sbjct: 16  SSSSSSFQFKQNSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFG 75

Query: 62  FLPKG-PIPPSAPSKRHNSVVNSAPLN 80
           FLPKG PIPPS PS RHNSVV+S P N
Sbjct: 76  FLPKGVPIPPSGPSDRHNSVVDSLPPN 102

[Close]

BLAST of IVF0015775 vs. TAIR 10
Match: AT1G68765.1 (Putative membrane lipoprotein )

HSP 1 Score: 50.1 bits (118), Expect = 9.9e-07
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 49 NHQIFSFLPKG-PIPPSAPSKRHNSVVNSAP 79
          N  IF +LPKG PIPPSAPSKRHNS VNS P
Sbjct: 46 NSHIFGYLPKGVPIPPSAPSKRHNSFVNSLP 76

The following BLAST results are available for this feature:

BLAST of IVF0015775 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAD7	1.4e-05	77.42	Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1	[more]

BLAST of IVF0015775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPP8	4.4e-31	89.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577390 PE=4 SV=1	[more]
A0A5D3CCP4	1.5e-07	50.57	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7SV51	1.5e-07	50.57	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A0A0KR07	3.8e-06	51.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1	[more]
A0A2P6R1Y4	6.5e-06	42.16	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0436131 PE=4...	[more]

BLAST of IVF0015775 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51548.1	3.53e-42	89.61	hypothetical protein Csa_008377 [Cucumis sativus]	[more]
KAG6579701.1	1.29e-13	58.90	hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6601760.1	1.94e-12	55.84	hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0034518.1	4.97e-11	50.57	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]
TYK09072.1	5.48e-11	50.57	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0015775 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68765.1	9.9e-07	77.42	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..80
None	No IPR available	PANTHER	PTHR33599:SF18	PROTEIN IDA	coord: 20..80
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 20..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015775.1	IVF0015775.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission
cellular_component	GO:0005615	extracellular space