IVF0015620 (gene) Melon (IVF77) v1

Overview
NameIVF0015620
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr06: 11406138 .. 11406446 (-)
RNA-Seq ExpressionIVF0015620
SyntenyIVF0015620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGACTCAATGTAATGCATTTCTTAGGCTGTTGCTGACAGAAACAACCTCTTTCTCTCTCTCTCTTTCTCTCTTCCTCGACCAGTTCTCCGTCTCCTTCAACTGTTCCTGCAGATTCCCCCTCTTCTTCTTCAACCTACTCACGGCAGCTTCCTCCGGCTCCGACGACGCCAGTAACAAACCACTTCCTATCCTCCCTTCACCAACTATTCCCTAAAACTCCACCCACTATCCAATATGTTTCTAACCTTCCGGATCTGAATCAGACCCTAAATCTGAAACTGGCTTCTCTCTCTATATTTTGA

mRNA sequence

ATGAAAGGACTCAATGTAATGCATTTCTTAGGCTATTCCCCCTCTTCTTCTTCAACCTACTCACGGCAGCTTCCTCCGGCTCCGACGACGCCAGTAACAAACCACTTCCTATCCTCCCTTCACCAACTATTCCCTAAAACTCCACCCACTATCCAATATGTTTCTAACCTTCCGGATCTGAATCAGACCCTAAATCTGAAACTGGCTTCTCTCTCTATATTTTGA

Coding sequence (CDS)

ATGAAAGGACTCAATGTAATGCATTTCTTAGGCTATTCCCCCTCTTCTTCTTCAACCTACTCACGGCAGCTTCCTCCGGCTCCGACGACGCCAGTAACAAACCACTTCCTATCCTCCCTTCACCAACTATTCCCTAAAACTCCACCCACTATCCAATATGTTTCTAACCTTCCGGATCTGAATCAGACCCTAAATCTGAAACTGGCTTCTCTCTCTATATTTTGA

Protein sequence

MKGLNVMHFLGYSPSSSSTYSRQLPPAPTTPVTNHFLSSLHQLFPKTPPTIQYVSNLPDLNQTLNLKLASLSIF
Homology
[Close]
BLAST of IVF0015620 vs. ExPASy TrEMBL
Match: A0A0A0L6S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251900 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1  MKGLNVMHFLGYSPSSSSTYSRQLPPAPTTPVTNHFLSSLHQLFPKTPPTIQYVSNLPDL 60
          MKGLNV+HFLGYSPSSSSTYSRQLPPA    +TNHF SSLHQL PKTPPTI YVSNLPDL
Sbjct: 1  MKGLNVLHFLGYSPSSSSTYSRQLPPA---RLTNHFRSSLHQLCPKTPPTIHYVSNLPDL 60

Query: 61 NQTLNLKLASLSIF 75
          NQTLNLKLASLS+F
Sbjct: 61 NQTLNLKLASLSVF 71

[Close]
BLAST of IVF0015620 vs. NCBI nr
Match: KGN57680.1 (hypothetical protein Csa_010019 [Cucumis sativus])

HSP 1 Score: 123 bits (309), Expect = 4.76e-35
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1  MKGLNVMHFLGYSPSSSSTYSRQLPPAPTTPVTNHFLSSLHQLFPKTPPTIQYVSNLPDL 60
          MKGLNV+HFLGYSPSSSSTYSRQLPPA    +TNHF SSLHQL PKTPPTI YVSNLPDL
Sbjct: 1  MKGLNVLHFLGYSPSSSSTYSRQLPPAR---LTNHFRSSLHQLCPKTPPTIHYVSNLPDL 60

Query: 61 NQTLNLKLASLSIF 74
          NQTLNLKLASLS+F
Sbjct: 61 NQTLNLKLASLSVF 71

The following BLAST results are available for this feature:
BLAST of IVF0015620 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6S41.5e-2586.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251900 PE=4 SV=1[more]
BLAST of IVF0015620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57680.14.76e-3586.49hypothetical protein Csa_010019 [Cucumis sativus][more]
BLAST of IVF0015620 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015620.1IVF0015620.1mRNA