IVF0015599 (gene) Melon (IVF77) v1

Overview
NameIVF0015599
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionparamyosin-like
Locationchr05: 7809418 .. 7809624 (+)
RNA-Seq ExpressionIVF0015599
SyntenyIVF0015599
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTAAACAGAAACAACCCTTGCTCTGGTGGTTCAAAAAATTGA

mRNA sequence

ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTAAACAGAAACAACCCTTGCTCTGGTGGTTCAAAAAATTGA

Coding sequence (CDS)

ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTAAACAGAAACAACCCTTGCTCTGGTGGTTCAAAAAATTGA

Protein sequence

MEELNIKKSELESQIVVVKSSTWTVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSKN
Homology
BLAST of IVF0015599 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 68
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA NRNN  S GS+
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGSR 45

BLAST of IVF0015599 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 68
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA NRNN  S GS+
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGSR 45

BLAST of IVF0015599 vs. ExPASy TrEMBL
Match: A0A0A0M0F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 27 SMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCS 64
          SM++GTWAECA+RK+EHYYEV RGKY+VA NRN PCS
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGPCS 39

BLAST of IVF0015599 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.9e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 68
          TVASMI+ TWA CAKR+VEHYYE RR K++VA NRNN CS GS+
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNNLCSSGSR 94

BLAST of IVF0015599 vs. ExPASy TrEMBL
Match: A0A5A7TSD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00680 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0

Query: 30  VGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 68
           +GTWAEC K+ VEHYYE+RR KY+VA NRN+PCS  SK
Sbjct: 101 IGTWAECVKKGVEHYYELRRRKYEVASNRNDPCSSVSK 138

BLAST of IVF0015599 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 6.23e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 67
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA NRNN  S GS+
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGSR 45

BLAST of IVF0015599 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 6.75e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 67
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA NRNN  S GS+
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGSR 45

BLAST of IVF0015599 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 9.14e-14
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 27 SMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCS 63
          SM++GTWAECA+RK+EHYYEV RGKY+VA NRN PCS
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGPCS 39

BLAST of IVF0015599 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 3.10e-13
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 67
          TVASMI+ TWA CAKR+VEHYYE RR K++VA NRNN CS GS+
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNNLCSSGSR 94

BLAST of IVF0015599 vs. NCBI nr
Match: KAA0046453.1 (hypothetical protein E6C27_scaffold543G00250 [Cucumis melo var. makuwa] >TYJ97760.1 hypothetical protein E5676_scaffold1251G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.65e-10
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0

Query: 30  VGTWAECAKRKVEHYYEVRRGKYKVALNRNNPCSGGSK 67
           +GTWAEC K+ VEHYYE+RR KY+VA NRN+PCS  SK
Sbjct: 101 IGTWAECVKKGVEHYYELRRRKYEVASNRNDPCSSVSK 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG86.3e-1077.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR746.3e-1077.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0M0F22.4e-0978.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1[more]
A0A5A7TWH66.9e-0972.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TSD53.8e-0771.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK22029.16.23e-1477.27uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.16.75e-1477.27uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KGN65701.19.14e-1478.38hypothetical protein Csa_019881 [Cucumis sativus][more]
KAA0045599.13.10e-1372.73hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
KAA0046453.13.65e-1071.05hypothetical protein E6C27_scaffold543G00250 [Cucumis melo var. makuwa] >TYJ9776... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015599.1IVF0015599.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane