Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTGCAGCCGAGAGGATCATCATCGTCATCTTCTCACATGCGTTGGAGTCGAGAGGATGATCATCTTCATCTTCTCACATGCGTTGCAATTGAGAGAATCTTCATCTTCATCTTCTCACATGTGTTGCAGCCGAGAAGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGCGTTGCAGCTGAGAGGATCTTTATCTTCATCTTCTCACATGTGTTGCAGCCAAGAGGATCATCCTCTTCTTTATCTTCATTAGAATCATCTTCATCTTCATCTTCATCTTCAATACGGTTTAAGCTGATAGAATCATCTTCATCTTCATCTTCATCTTCAATGCGGCGTAGTAGAGACCATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGTAGAGACGATCATCATCTCCATTTTCAATGCGGCGCATCAGAGACAATCATCATCTCCATTTTCAATGCGGCGCATCAGAGACAATCATCATCTCCATCTTCAGTGCGGCGAGTCAATAGAATCATCATCATCCCATTCTTCAATGCAGCATGGTTGATAGAATCATCATCTCCATCTTCAATGCAGCACAACCGATAGAATCATCTCCATCTTCAATACGGCACAATCGTAGAATCATCTCCATCTTCAATGTGACGCAGCCGAAACGATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATTTTCATCTTCAATGTGGCGTAG
mRNA sequence
ATGTGTTGCAGCCGAGAGGATCATCATCGTCATCTTCTCACATGCGTTGGAGTCGAGAGGATGATCATCTTCATCTTCTCACATGCGTTGCAATTGAGAGAATCTTCATCTTCATCTTCTCACATGTGTTGCAGCCGAGAAGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGCGTTGCAGCTGAGAGGATCTTTATCTTCATCTTCTCACATGTGTTGCAGCCAAGAGGATCATCCTCTTCTTTATCTTCATTAGAATCATCTTCATCTTCATCTTCATCTTCAATACGGTTTAAGCTGATAGAATCATCTTCATCTTCATCTTCATCTTCAATGCGGCGTAGTAGAGACCATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCACCGAAACGATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATTTTCATCTTCAATGTGGCGTAG
Coding sequence (CDS)
ATGTGTTGCAGCCGAGAGGATCATCATCGTCATCTTCTCACATGCGTTGGAGTCGAGAGGATGATCATCTTCATCTTCTCACATGCGTTGCAATTGAGAGAATCTTCATCTTCATCTTCTCACATGTGTTGCAGCCGAGAAGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGTATTGCAACCGAGAGGATCTTTATCTTCATCTTCTCACATGCGTTGCAGCTGAGAGGATCTTTATCTTCATCTTCTCACATGTGTTGCAGCCAAGAGGATCATCCTCTTCTTTATCTTCATTAGAATCATCTTCATCTTCATCTTCATCTTCAATACGGTTTAAGCTGATAGAATCATCTTCATCTTCATCTTCATCTTCAATGCGGCGTAGTAGAGACCATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCAAGACGATCATCATCTCCATCTTCAGTGCGGCGCAGTAGAGACGATCATCATCTCCATCTTCAGTGCGGCGCACCGAAACGATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGTAATCGAGACGATCATCATGTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTTCATCTTCAATGCGACGCAATCGAGACGATCATCATCTCCATCTTCAATGCGACGCAATCGAGACGATCATCATTTTCATCTTCAATGTGGCGTAG
Protein sequence
MCCSREDHHRHLLTCVGVERMIIFIFSHALQLRESSSSSSHMCCSREDLYLHLLTCIATERIFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHLLTCVAAERIFIFIFSHVLQPRGSSSSLSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIIISIFSAAQDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQSRRSSCSSSMRRNRDDHHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDAIETIIIFIFNVA
Homology
BLAST of IVF0013813 vs. ExPASy TrEMBL
Match:
A0A5A7TBX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00100 PE=4 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 5.3e-69
Identity = 172/310 (55.48%), Postives = 203/310 (65.48%), Query Frame = 0
Query: 1 MCCSREDHHRHLLTCVGVERMIIFIFSHALQLRESSSSSSHMCCSREDLYLHLLTCIATE 60
+CC +EDHH HLLTCV +R+IIFIFSH LQ R SSSSSSHMCCSRED +LHLLTC+A E
Sbjct: 287 ICCKQEDHHLHLLTCVADKRIIIFIFSHVLQTRGSSSSSSHMCCSREDHHLHLLTCVAVE 346
Query: 61 RIFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHLLTCVAAERIFIFIFSHVLQPRGSSSS 120
+I IFIFSHVLQ RGS SSSSHM C+ +D YLHLLTC+A ERI F FSHVLQPRGSSSS
Sbjct: 347 KIIIFIFSHVLQSRGSSSSSSHMCCSCKDHYLHLLTCIAVERIINFTFSHVLQPRGSSSS 406
Query: 121 LSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHL-QCGAVETIIISIFS-AA 180
S + S + ++ M RS++ HLHL C A + III IFS
Sbjct: 407 SSYMCCSQEDHHLHLLTCVVVERIIIFIFFMSRSQEDFHLHLFTCIATKRIIIFIFSHVL 466
Query: 181 QDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQSRRSSCSSS-MR 240
Q A ETII IF+A + D+ +A E II+FIFNA Q R+ S SSS M
Sbjct: 467 QSRGSSSSSSIATETIISFIFNATYSRDV----NAAEIIIIFIFNAVQQRQLSYSSSHMC 526
Query: 241 RNRDDH-HVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDAI------ 300
+R+DH H+HLQC + RRSSSSSSMR +R+DHHLHLQCDA+
Sbjct: 527 CSREDHLHLHLQC-------------REQRRSSSSSSMRHSRNDHHLHLQCDAVEAFGAA 579
BLAST of IVF0013813 vs. ExPASy TrEMBL
Match:
A0A5A7U1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001320 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54
Identity = 146/313 (46.65%), Postives = 170/313 (54.31%), Query Frame = 0
Query: 14 TCVGVERMIIFIFSHALQLRESSSSSSHMCCS------------REDLYLHLLTCIATER 73
T VG + IFIF+H LQ R SSSSSSH+CCS RED +LHL TC+A ER
Sbjct: 45 TEVGRIIIFIFIFAHVLQPRGSSSSSSHICCSRENHHLHFSYVFREDHHLHLFTCVAVER 104
Query: 74 IFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHLLTCVAAERIFI--FIFSHVLQPRGSSS 133
I IFIFSH+LQ R S SSS+M ++E +L+LLTCVA E+IFI FIFSH LQPRG S
Sbjct: 105 IIIFIFSHMLQSRESSFSSSNMCYSQECHHLYLLTCVAVEKIFIFNFIFSHGLQPRGPYS 164
Query: 134 SLSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIII------- 193
SLSS+ RSR+ HHLHLQ A E I I
Sbjct: 165 SLSSM----------------------------RSREDHHLHLQSVAAERIFIFCHMLQP 224
Query: 194 ------SIFSAAQDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQ 253
S +Q+DHHL LQC + L LQ D E II+FIFN Q
Sbjct: 225 RGSSSSSSMCCSQEDHHLRLQC---------CRNGEDHLHLRLQHDTTERIILFIFNVAQ 284
Query: 254 SRRSSCSSSMRRNRDDHHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQ 300
+RSS SSSM R+R+D H+HLQC ETII+FI N DHHLHLQ
Sbjct: 285 QKRSSSSSSMWRSRNDRHLHLQCGAAETIIIFILNVI----------------DHHLHLQ 304
BLAST of IVF0013813 vs. ExPASy TrEMBL
Match:
A0A5A7SRV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00800 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 9.8e-39
Identity = 130/306 (42.48%), Postives = 153/306 (50.00%), Query Frame = 0
Query: 18 VERMIIFIFSHALQLRES-----------SSSSSHMCC----------SREDLYLHLLTC 77
VER+IIF LQLRES SSSSS MCC SRED LH L C
Sbjct: 41 VERIIIFNLMR-LQLRESSSSLMCCSPRGSSSSSSMCCHLHLCLQCEHSRED--LHHLPC 100
Query: 78 IATERIFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHL-LTCVAAERIFIFIFSHVLQPR 137
+A ERIFIFIFS +LQPRGS S SS M C+++D +LH L CVAA++IFIFIFSHV + R
Sbjct: 101 VAVERIFIFIFSLMLQPRGS-SFSSSMCCSQKDNHLHFHLQCVAAKKIFIFIFSHVFRLR 160
Query: 138 GSSSSLSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIIISIF 197
GSSSS SSL S
Sbjct: 161 GSSSSSSSLSSPIC---------------------------------------------- 220
Query: 198 SAAQDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQSRRSSCSSS 257
+E II+FIF+A Q RRSS SS
Sbjct: 221 -------------------------------------CMERIIIFIFHAAQQRRSSSSSF 259
Query: 258 MRRNRDDHHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDAIETIII 302
+R +RD H +HL C ET+I+FIF+A Q RRSSSSS MRR+RD H LHL C A ET+I+
Sbjct: 281 LRCSRDGHRLHLSCGAAETVIVFIFHAAQQRRSSSSSFMRRSRDGHRLHLPCGAAETVIV 259
BLAST of IVF0013813 vs. ExPASy TrEMBL
Match:
A0A5D3BVC5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00860 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 8.3e-38
Identity = 114/216 (52.78%), Postives = 126/216 (58.33%), Query Frame = 0
Query: 1 MCCSREDHHRHLLTCVGVERMIIFIFSHALQLRESSSSSSH------------------- 60
+CCSREDHH HLLTCV ER IIFIFSH LQ R SSSSS H
Sbjct: 558 ICCSREDHHLHLLTCVAAERFIIFIFSHVLQFRGSSSSSFHICYSRENLHLNLFTYSKGS 617
Query: 61 ------MCCSREDL---------YLHLLTCIATERIFIFIFSHVLQPRGSLSSSSHMYCN 120
MCCS++DL +LHLLTC A +RI IFIF ++LQ RGSLSSSSH+YC+
Sbjct: 618 PSSSSPMCCSQKDLHLRFSQEDHHLHLLTCAAAKRIIIFIF-NLLQQRGSLSSSSHIYCS 677
Query: 121 REDLYL--HLLTCVAAER--IFIFIFSHVLQPRGSSSSLSSLESSSSSSSSSIRFKLIES 176
REDL+L HLLTCV+AE+ IFIFIFSHVLQPRG S
Sbjct: 678 REDLHLHFHLLTCVSAEKIIIFIFIFSHVLQPRG-------------------------S 737
BLAST of IVF0013813 vs. ExPASy TrEMBL
Match:
A0A5D3DRX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00420 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 1.6e-33
Identity = 119/297 (40.07%), Postives = 150/297 (50.51%), Query Frame = 0
Query: 14 TCVGVERMIIFIFSHALQLRESSSSSSHMCCSREDLYLHLLTCIATERIFIFIFSHVLQP 73
T VG + IFIF+H LQ R SSSSSSH+ ERI FIFSHVLQ
Sbjct: 45 TEVGRIIIFIFIFAHVLQPRGSSSSSSHI----------------FERIITFIFSHVLQS 104
Query: 74 RGSLSSSSHMYCNREDLYLHLLTCVAAE---RIFIFIFSHVLQPR-------GSSSSLSS 133
R S SSSSH+ C+RE+ + HLLTCV A+ IFIFIF+ ++ R + +
Sbjct: 105 RESSSSSSHICCSRENHHFHLLTCVTAKTKRTIFIFIFNAIVTERIIFIFLFNTIIIIFI 164
Query: 134 LESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIIISIFSAAQDDHH 193
+ ++ + FK++ SSSS+ DHH HH
Sbjct: 165 FNTIATERTIIFIFKVLLQRGSSSSAICCSQEDHH-----------------------HH 224
Query: 194 LHLQCGAVETIIISIFSAAHRNDLHLQCDAIETII-MFIFNATQSRRSSCSSSMRRNRDD 253
LHLQC A + III +F+ A E II +F+FN TQ R SS SSSM R+R+D
Sbjct: 225 LHLQCVAAKKIIIFVFNVV----------ATERIIFIFVFNMTQPRGSSSSSSMWRSRND 276
Query: 254 HHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDAIETIIIFIFN 300
H+HLQC ETII+ I N DHHLHLQCDA E ++IF FN
Sbjct: 285 RHLHLQCGAAETIIIIILNVI----------------DHHLHLQCDAAEAVVIFNFN 276
BLAST of IVF0013813 vs. NCBI nr
Match:
KAA0039121.1 (hypothetical protein E6C27_scaffold121G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 286 bits (731), Expect = 1.91e-88
Identity = 178/337 (52.82%), Postives = 206/337 (61.13%), Query Frame = 0
Query: 1 MCCSREDHHRHLLTCVGVERMIIFIFSHALQLRESSSSSSHMCCSREDLYLHLLTCIATE 60
+CC +EDHH HLLTCV +R+IIFIFSH LQ R SSSSSSHMCCSRED +LHLLTC+A E
Sbjct: 287 ICCKQEDHHLHLLTCVADKRIIIFIFSHVLQTRGSSSSSSHMCCSREDHHLHLLTCVAVE 346
Query: 61 RIFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHLLTCVAAERIFIFIFSHVLQPRGSSSS 120
+I IFIFSHVLQ RGS SSSSHM C+ +D YLHLLTC+A ERI F FSHVLQPRGSSSS
Sbjct: 347 KIIIFIFSHVLQSRGSSSSSSHMCCSCKDHYLHLLTCIAVERIINFTFSHVLQPRGSSSS 406
Query: 121 LSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHL-QCGAVETIIISIF--SA 180
SS M S++ HHLHL C VE III IF S
Sbjct: 407 ---------------------------SSYMCCSQEDHHLHLLTCVVVERIIIFIFFMSR 466
Query: 181 AQDDHHLHL--------------------------QCGAVETIIISIFSAAHRNDLHLQC 240
+Q+D HLHL A ETII IF+A + D++
Sbjct: 467 SQEDFHLHLFTCIATKRIIIFIFSHVLQSRGSSSSSSIATETIISFIFNATYSRDVN--- 526
Query: 241 DAIETIIMFIFNATQSRRSSCSSS-MRRNRDDH-HVHLQCDVIETIIMFIFNATQSRRSS 300
A E II+FIFNA Q R+ S SSS M +R+DH H+HLQC + RRSS
Sbjct: 527 -AAEIIIIFIFNAVQQRQLSYSSSHMCCSREDHLHLHLQC-------------REQRRSS 579
BLAST of IVF0013813 vs. NCBI nr
Match:
KAA0047505.1 (hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa])
HSP 1 Score: 224 bits (570), Expect = 1.81e-67
Identity = 146/315 (46.35%), Postives = 170/315 (53.97%), Query Frame = 0
Query: 14 TCVGVERMIIFIFSHALQLRESSSSSSHMCCSRE------------DLYLHLLTCIATER 73
T VG + IFIF+H LQ R SSSSSSH+CCSRE D +LHL TC+A ER
Sbjct: 45 TEVGRIIIFIFIFAHVLQPRGSSSSSSHICCSRENHHLHFSYVFREDHHLHLFTCVAVER 104
Query: 74 IFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHLLTCVAAERIFIF--IFSHVLQPRGSSS 133
I IFIFSH+LQ R S SSS+M ++E +L+LLTCVA E+IFIF IFSH LQPRG S
Sbjct: 105 IIIFIFSHMLQSRESSFSSSNMCYSQECHHLYLLTCVAVEKIFIFNFIFSHGLQPRGPYS 164
Query: 134 SLSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIII------- 193
SLSS+ RSR+ HHLHLQ A E I I
Sbjct: 165 SLSSM----------------------------RSREDHHLHLQSVAAERIFIFCHMLQP 224
Query: 194 ------SIFSAAQDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQ 253
S +Q+DHHL LQC + L LQ D E II+FIFN Q
Sbjct: 225 RGSSSSSSMCCSQEDHHLRLQCCR---------NGEDHLHLRLQHDTTERIILFIFNVAQ 284
Query: 254 SRRSSCSSSMRRNRDDHHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQ 301
+RSS SSSM R+R+D H+HLQC ETII+FI N DHHLHLQ
Sbjct: 285 QKRSSSSSSMWRSRNDRHLHLQCGAAETIIIFILNVI----------------DHHLHLQ 306
BLAST of IVF0013813 vs. NCBI nr
Match:
KAA0033278.1 (hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 177 bits (449), Expect = 5.83e-50
Identity = 133/312 (42.63%), Postives = 158/312 (50.64%), Query Frame = 0
Query: 13 LTCVG-VERMIIFIFSHALQLRESSSS-----------SSHMCC----------SREDLY 72
L +G VER+IIF LQLRESSSS SS MCC SREDL
Sbjct: 35 LNFIGTVERIIIFNLMR-LQLRESSSSLMCCSPRGSSSSSSMCCHLHLCLQCEHSREDL- 94
Query: 73 LHLLTCIATERIFIFIFSHVLQPRGSLSSSSHMYCNREDLYLHL-LTCVAAERIFIFIFS 132
H L C+A ERIFIFIFS +LQPRGS S SS M C+++D +LH L CVAA++IFIFIFS
Sbjct: 95 -HHLPCVAVERIFIFIFSLMLQPRGS-SFSSSMCCSQKDNHLHFHLQCVAAKKIFIFIFS 154
Query: 133 HVLQPRGSSSSLSSLESSSSSSSSSIRFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVET 192
HV + RGSSSS SSL S
Sbjct: 155 HVFRLRGSSSSSSSLSS------------------------------------------- 214
Query: 193 IIISIFSAAQDDHHLHLQCGAVETIIISIFSAAHRNDLHLQCDAIETIIMFIFNATQSRR 252
+ C +E II+FIF+A Q RR
Sbjct: 215 --------------------------------------PICC--MERIIIFIFHAAQQRR 259
Query: 253 SSCSSSMRRNRDDHHVHLQCDVIETIIMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDA 301
SS SS +R +RD H +HL C ET+I+FIF+A Q RRSSSSS MRR+RD H LHL C A
Sbjct: 275 SSSSSFLRCSRDGHRLHLSCGAAETVIVFIFHAAQQRRSSSSSFMRRSRDGHRLHLPCGA 259
BLAST of IVF0013813 vs. NCBI nr
Match:
TYK02186.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 170 bits (431), Expect = 7.32e-44
Identity = 114/216 (52.78%), Postives = 126/216 (58.33%), Query Frame = 0
Query: 1 MCCSREDHHRHLLTCVGVERMIIFIFSHALQLRESSSSSSH------------------- 60
+CCSREDHH HLLTCV ER IIFIFSH LQ R SSSSS H
Sbjct: 558 ICCSREDHHLHLLTCVAAERFIIFIFSHVLQFRGSSSSSFHICYSRENLHLNLFTYSKGS 617
Query: 61 ------MCCSREDLYL---------HLLTCIATERIFIFIFSHVLQPRGSLSSSSHMYCN 120
MCCS++DL+L HLLTC A +RI IFIF+ +LQ RGSLSSSSH+YC+
Sbjct: 618 PSSSSPMCCSQKDLHLRFSQEDHHLHLLTCAAAKRIIIFIFN-LLQQRGSLSSSSHIYCS 677
Query: 121 REDLYLH--LLTCVAAERI--FIFIFSHVLQPRGSSSSLSSLESSSSSSSSSIRFKLIES 175
REDL+LH LLTCV+AE+I FIFIFSHVLQPRGSSSS
Sbjct: 678 REDLHLHFHLLTCVSAEKIIIFIFIFSHVLQPRGSSSS---------------------- 737
BLAST of IVF0013813 vs. NCBI nr
Match:
TYK26477.1 (hypothetical protein E5676_scaffold313G00420 [Cucumis melo var. makuwa])
HSP 1 Score: 158 bits (400), Expect = 2.04e-42
Identity = 110/286 (38.46%), Postives = 142/286 (49.65%), Query Frame = 0
Query: 19 ERMIIFIFSHALQLRESSSSSSHMCCSREDLYLHLLTCIA--TER-IFIFIFSHVLQPRG 78
ER+I FIFSH LQ RESSSSSSH+CCSRE+ + HLLTC+ T+R IFIFIF+ ++ R
Sbjct: 75 ERIITFIFSHVLQSRESSSSSSHICCSRENHHFHLLTCVTAKTKRTIFIFIFNAIVTERI 134
Query: 79 SLSSSSHMYCNREDLYLHLLTCVAAERIFIFIFSHVLQPRGSSSSLSSLESSSSSSSSSI 138
++ + + + +A ER IFIF +LQ RGSSSS
Sbjct: 135 IF-----IFLFNTIIIIFIFNTIATERTIIFIFKVLLQ-RGSSSS--------------- 194
Query: 139 RFKLIESSSSSSSSSMRRSRDHHHLHLQCGAVETIIISIFSAAQDDHHLHLQCGAVETII 198
++ S++ HH HHLHLQC A + II
Sbjct: 195 --------------AICCSQEDHH----------------------HHLHLQCVAAKKII 254
Query: 199 ISIFSAAHRNDLHLQCDAIETIIMFIFNATQSRRSSCSSSMRRNRDDHHVHLQCDVIETI 258
I +F+ + I +F+FN TQ R SS SSSM R+R+D H+HLQC ETI
Sbjct: 255 IFVFNVVATERI---------IFIFVFNMTQPRGSSSSSSMWRSRNDRHLHLQCGAAETI 278
Query: 259 IMFIFNATQSRRSSSSSSMRRNRDDHHLHLQCDAIETIIIFIFNVA 301
I+ I N DHHLHLQCDA E ++IF FN
Sbjct: 315 IIIILNVI----------------DHHLHLQCDAAEAVVIFNFNAV 278
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TBX4 | 5.3e-69 | 55.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U1J1 | 6.3e-54 | 46.65 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7SRV7 | 9.8e-39 | 42.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVC5 | 8.3e-38 | 52.78 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5D3DRX7 | 1.6e-33 | 40.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0039121.1 | 1.91e-88 | 52.82 | hypothetical protein E6C27_scaffold121G00100 [Cucumis melo var. makuwa] | [more] |
KAA0047505.1 | 1.81e-67 | 46.35 | hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa] | [more] |
KAA0033278.1 | 5.83e-50 | 42.63 | hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa] | [more] |
TYK02186.1 | 7.32e-44 | 52.78 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
TYK26477.1 | 2.04e-42 | 38.46 | hypothetical protein E5676_scaffold313G00420 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |