IVF0013627 (gene) Melon (IVF77) v1

Overview


Name	IVF0013627
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Auxin-responsive protein
Location	chr02: 13396992 .. 13398436 (+)
RNA-Seq Expression	IVF0013627
Synteny	IVF0013627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGGAACATGAGAGCGAGTGGGTCGGCCAAAGCCAGAGCATTGATGCGGACATCTTAGACGTTTTTCCCTTCTCTTTCCAACACTTTGTCCCCATCTTCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTTCCATTTTCTGTAATTCTAATTCTTCTTTTCTTCTCCTTCCTCTTCTTACACATTTTTCTTCAATCAATCCCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTCGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCTCTCCCACATTTCCTCGAACCACACTTCCTCTGCTTCTTTGGAATGATCATCCCAATGATGGCGATGGCGATGACTCTAATGACCCCCTTTCTGCTTCCTCTAATGATTCGTATGCCACTATCTCTTACTTTTCTGTCTTTGATTTTGGAGTTTCGATTTGATTTGGGCTGAATTCTTTTGTTTGGTTGATTGAACAGAGACGAGGAGGAGGAGGAGCGGGAGAACGGGCTTGTGGGATGGCCGCCGCTAAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGGGCGGTGATCCGGCGTCCAGCGGTGAAGAACGACGGCGGGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAACATGTTTGGTGAGCTTGTATTCCAAACATATATCTAATCATTCAAACATTAATCCATTGTTTAATTTTATATATACTTCAAAACACATTTGAAGGGACTTTGAAACAAAATGCTATCATTATTTCGCTTCTTACTGATTCTCAAATTGTTTTGTTAACAGATGAAACGAATTCCGAAGGTTACAGACTCACTTTCCAGAATACCAACGGGGAATGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGTTAAAAAGATCTCTTCTGACATTTCGATCCACAATGGACATTATTTTAAAAATTTAAATGGGGGTTTTGATATCGACAGGAATTTCATCGGAGATGTTCAACGGATCAAACTGGAAAAGAAGTCCGGGTGAAGAGGGTCAGAGAATCGGATGCTGTCTAATTAAAATATATTTCTATGTTTTTTTTTCCTTTTGTTTTAAATAGCAGTTTTTGAGTTTTGATGACTATATATGTAATGATATATATATATATATTGAGAAAACTTAATCTTTAGATTATTAATCGGTTCTTACTTTTTGACCTTATTTGTTTTTTTGTTGGGTAAAAGATGTCTAGG

mRNA sequence

AAAAAAGGAACATGAGAGCGAGTGGGTCGGCCAAAGCCAGAGCATTGATGCGGACATCTTAGACGTTTTTCCCTTCTCTTTCCAACACTTTGTCCCCATCTTCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTTCCATTTTCTGTAATTCTAATTCTTCTTTTCTTCTCCTTCCTCTTCTTACACATTTTTCTTCAATCAATCCCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTCGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCTCTCCCACATTTCCTCGAACCACACTTCCTCTGCTTCTTTGGAATGATCATCCCAATGATGGCGATGGCGATGACTCTAATGACCCCCTTTCTGCTTCCTCTAATGATTCAGACGAGGAGGAGGAGGAGCGGGAGAACGGGCTTGTGGGATGGCCGCCGCTAAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGGGCGGTGATCCGGCGTCCAGCGGTGAAGAACGACGGCGGGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAACATGTTTGATGAAACGAATTCCGAAGGTTACAGACTCACTTTCCAGAATACCAACGGGGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAGATGTTCAACGGATCAAACTGGAAAAGAAGTCCGGGTGAAGAGGGTCAGAGAATCGGATGCTGTCTAATTAAAATATATTTCTATGTTTTTTTTTCCTTTTGTTTTAAATAGCAGTTTTTGAGTTTTGATGACTATATATGTAATGATATATATATATATATTGAGAAAACTTAATCTTTAGATTATTAATCGGTTCTTACTTTTTGACCTTATTTGTTTTTTTGTTGGGTAAAAGATGTCTAGG

Coding sequence (CDS)

ATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTCGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCTCTCCCACATTTCCTCGAACCACACTTCCTCTGCTTCTTTGGAATGATCATCCCAATGATGGCGATGGCGATGACTCTAATGACCCCCTTTCTGCTTCCTCTAATGATTCAGACGAGGAGGAGGAGGAGCGGGAGAACGGGCTTGTGGGATGGCCGCCGCTAAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGGGCGGTGATCCGGCGTCCAGCGGTGAAGAACGACGGCGGGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAACATGTTTGATGAAACGAATTCCGAAGGTTACAGACTCACTTTCCAGAATACCAACGGGGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAGATGTTCAACGGATCAAACTGGAAAAGAAGTCCGGGTGA

Protein sequence

MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLLLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETNSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG

Homology

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BLAST of IVF0013627 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 78/249 (31.33%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 3   MELQLGLALIPTNPIK---PFDLNTH---NNNPISLVFDSINHKKR--SRHLDSSPTFPR 62
           MEL LGL+L P    K    FDLN H         L  + +  +      +++ +   P+
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 63  TTLPLLLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEG 122
             L  L  N  PN+ D     DPL + S+   ++EEE    +VGWPP+    K+  +K G
Sbjct: 61  QRLFAL--NGQPNEED----EDPLESESSIVYDDEEENSE-VVGWPPV----KTCMIKYG 120

Query: 123 V-----------------GRRAVIRRPAVKNDGGFWRG------LDLNNSRYVKVKMEGV 182
                             GRR       + N      G      +   +S YVKVKM+GV
Sbjct: 121 SYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGV 180

Query: 183 GIARKVDLREHHSFDALRATLMNMFDE-----TNSEGYRLTFQNTNGEWLLAENVTWRNF 216
            IARKVD++  +S+++L  +L+ MF E          Y  TFQ   G+WLL  +VTW+ F
Sbjct: 181 AIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIF 238

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BLAST of IVF0013627 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.5e-13
Identity = 50/163 (30.67%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 79  SASSNDSDEEEEERENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKN 138
           SA S+        R + +VGWPP+   R          K+   +EG G + V++   +K 
Sbjct: 53  SAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK- 112

Query: 139 DGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDE---------- 198
           D        +    +VKV M+GVGI RKVD+R H S++ L  TL  MF            
Sbjct: 113 DVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKV 172

Query: 199 ------TNSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKL 216
                   S  + LT+++  G+W+L  +V WR FI  V+R+++
Sbjct: 173 KPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]

BLAST of IVF0013627 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 96  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEG 155
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSD---STKMRNSMFVKVTMDG 148

Query: 156 VGIARKVDLREHHSFDALRATLMNMFDE----------------------TNSEGYRLTF 215
           + I RK+DL  H  +++L  TL  MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 216 QNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 220
           ++  G+W+L  +V W  FIG V+R+++ K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

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BLAST of IVF0013627 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-11
Identity = 45/147 (30.61%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 83  NDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGGFWRGLDLNNSR 142
           N SD++   R+  +VGWPP+   R++                     GG         + 
Sbjct: 63  NTSDDDCRRRKKTVVGWPPVSSARRAC--------------------GG---------AN 122

Query: 143 YVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETNSEGYR--------------LTF 202
           YVKVK EG  I RKVDL  H S+D L ATL  MF   + +G +              +T+
Sbjct: 123 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTY 180

Query: 203 QNTNGEWLLAENVTWRNFIGDVQRIKL 216
           ++ +G+W+L  +V W +F   V+R+K+
Sbjct: 183 EDGDGDWMLVGDVPWDDFARSVKRLKI 180

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BLAST of IVF0013627 vs. ExPASy Swiss-Prot
Match: Q5VRR0 (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 52/157 (33.12%), Postives = 69/157 (43.95%), Query Frame = 0


Query: 68  DGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVK 127
           D D DD N        DSD E   +   LVGWPP+K   +                   +
Sbjct: 53  DDDNDDGNG--RGGDGDSDGEMGNKRRKLVGWPPVKCLHR-------------------R 112

Query: 128 NDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETNSEG---- 187
            DGG   G       YVKVKMEG+ I RK+DL    S+  L  TL  MF  TN E     
Sbjct: 113 RDGGCGGG-------YVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDR 172

Query: 188 -----YRLTFQNTNGEWLLAENVTWRNFIGDVQRIKL 216
                Y +T+++  G+W+   +V W  F   V+R+K+
Sbjct: 173 RRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKI 181

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BLAST of IVF0013627 vs. ExPASy TrEMBL
Match: A0A1S3B8T8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 221
           SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

[Close]

BLAST of IVF0013627 vs. ExPASy TrEMBL
Match: A0A0A0LWC5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 206/220 (93.64%), Postives = 207/220 (94.09%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 142

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 143 LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 202

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 203 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 262

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 221
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 263 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]

BLAST of IVF0013627 vs. ExPASy TrEMBL
Match: A0A6J1HA19 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.6e-73
Identity = 148/217 (68.20%), Postives = 174/217 (80.18%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D S  F R TLPLL
Sbjct: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAF-RRTLPLL 60

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPN+GD DD  +P SASSN  D  EE+ E  LVGWPPLKKRRK+LF+++ +GR   
Sbjct: 61  LWNDHPNNGD-DDPKNPNSASSNHPDNPEEQ-EIELVGWPPLKKRRKTLFVQKRIGRAVA 120

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPA++NDGG +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLMNMFD+ +
Sbjct: 121 IRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPD 180

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEK 218
           S+GY LT+Q+T+G+WLLAE+VTWR+FI  VQRIKLEK
Sbjct: 181 SDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEK 214

[Close]

BLAST of IVF0013627 vs. ExPASy TrEMBL
Match: A0A6J1JF88 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.8e-72
Identity = 148/217 (68.20%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLAL PTNP KPF LNTH+     L FDSI+ KKR   +D S  F R TLPLL
Sbjct: 79  MAMELQLGLALFPTNPTKPFHLNTHHRALPCLDFDSISGKKRPLDIDPSSAF-RRTLPLL 138

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSN  D  +E+ E  LVGWPPLKKRRK+LF+++ + R  V
Sbjct: 139 LWNDHPNDGD-DDPNDPNSASSNHPDNPKEQ-EIELVGWPPLKKRRKTLFVQKRIRRAVV 198

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPA++N GG  R L+ NNS YVKVKMEGVGI RKVD+R+HH FDALRATLMNMFD+ +
Sbjct: 199 IRRPAMENGGGVHRELNSNNSLYVKVKMEGVGIGRKVDIRQHHCFDALRATLMNMFDKPD 258

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEK 218
           S+GY LT+Q+T+G+WLLA++VTWR+FI  VQRIKLEK
Sbjct: 259 SDGYNLTYQDTDGDWLLADDVTWRDFIRTVQRIKLEK 292

[Close]

BLAST of IVF0013627 vs. ExPASy TrEMBL
Match: A0A6J1CTH1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014437 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.0e-57
Identity = 140/232 (60.34%), Postives = 162/232 (69.83%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNT--HNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLP 60
           MAMELQLGLALIPT   K FDLNT  H   P     D +  KKR+   D    F R TLP
Sbjct: 1   MAMELQLGLALIPT---KGFDLNTHVHETAPSFEYLDPVCAKKRALDFDPCSAF-RRTLP 60

Query: 61  LLLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKE----- 120
           LLLWN HPNDGD DD  D   +S+   +  + E  NGLVGWPPLKKRRK LFM++     
Sbjct: 61  LLLWNHHPNDGD-DDPKDIHRSSAFRPNRRDAEEGNGLVGWPPLKKRRKRLFMEKRGHGR 120

Query: 121 ----GVGRRAVIRRPAVKNDGGFWRGLD--LNNSRYVKVKMEGVGIARKVDLREHHSFDA 180
               G G  A  RRP V+N GGF+RG +   +NSRYVKVKMEGVGIARKVDL  HHSF A
Sbjct: 121 GRGRGRGPAAENRRP-VENGGGFYRGSNSSTSNSRYVKVKMEGVGIARKVDLSLHHSFAA 180

Query: 181 LRATLMNMFDETNS-EGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKK 219
           L ATLMNMFDET+S + YRLT+Q+ +G+WLLA++VTWRNF+G VQRI+LEKK
Sbjct: 181 LTATLMNMFDETDSADAYRLTYQDIDGDWLLAQDVTWRNFVGTVQRIQLEKK 226

[Close]

BLAST of IVF0013627 vs. NCBI nr
Match: XP_008443966.1 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 449 bits (1154), Expect = 3.67e-159
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220
           SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

[Close]

BLAST of IVF0013627 vs. NCBI nr
Match: XP_004150206.2 (auxin-responsive protein IAA29 [Cucumis sativus])

HSP 1 Score: 406 bits (1044), Expect = 2.02e-142
Identity = 206/220 (93.64%), Postives = 207/220 (94.09%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 60

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 121 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 180

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 181 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 218

[Close]

BLAST of IVF0013627 vs. NCBI nr
Match: KGN65132.1 (hypothetical protein Csa_023489 [Cucumis sativus])

HSP 1 Score: 406 bits (1044), Expect = 3.76e-141
Identity = 206/220 (93.64%), Postives = 207/220 (94.09%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 142

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 143 LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 202

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 203 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 262

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 263 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]

BLAST of IVF0013627 vs. NCBI nr
Match: XP_038879327.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 351 bits (900), Expect = 1.97e-120
Identity = 181/223 (81.17%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNP---ISLVFDSINHKKRSRHLDSSPTFPRTTL 60
           MAMELQLGLAL PTNPIKPFDLNTH+NNP   +   FDSI HKKRSR  + S  F R TL
Sbjct: 1   MAMELQLGLALTPTNPIKPFDLNTHHNNPHNPLCFDFDSITHKKRSRDFNHSAAF-RRTL 60

Query: 61  PLLLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGR 120
           PLLLWNDHPNDGD DDSNDP SASSNDSDEEEE RENGLVGWPPLKKRRKSLFMK+ VGR
Sbjct: 61  PLLLWNDHPNDGDDDDSNDPHSASSNDSDEEEE-RENGLVGWPPLKKRRKSLFMKKHVGR 120

Query: 121 RAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFD 180
            AVIRRP V+N GGF+RGL+ N SRYVKVKMEGVGIARKVDL +HHSFDALRATLMNMFD
Sbjct: 121 AAVIRRPMVENGGGFYRGLNSNYSRYVKVKMEGVGIARKVDLSQHHSFDALRATLMNMFD 180

Query: 181 ETNSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220
           ET+S+ YRLT+QN +G+WLLAENVTWRNFIG VQR+KLEKKSG
Sbjct: 181 ETDSDDYRLTYQNIDGDWLLAENVTWRNFIGIVQRMKLEKKSG 221

[Close]

BLAST of IVF0013627 vs. NCBI nr
Match: KAG7023504.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285 bits (728), Expect = 2.61e-94
Identity = 148/220 (67.27%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60
           MAMELQL L L PTNP KPFDLNTH+     L FDSI+ KKR   +D S  F R TLPLL
Sbjct: 1   MAMELQLSLGLFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAF-RRTLPLL 60

Query: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPN+GD D  N P SASSN  D  EE+ E  LVGWPPLKKRRK+LF+++ +GR   
Sbjct: 61  LWNDHPNNGDDDPKN-PNSASSNHPDNPEEQ-EIELVGWPPLKKRRKTLFVQKRIGRAVA 120

Query: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180
           IRRPA +NDGG +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLMNMFD+ +
Sbjct: 121 IRRPAAENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPD 180

Query: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220
           S+GY LT+Q+T+G+WLLAE+VTWR+FI  VQRIKLEK  G
Sbjct: 181 SDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 217

[Close]

BLAST of IVF0013627 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 78/249 (31.33%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 3   MELQLGLALIPTNPIK---PFDLNTH---NNNPISLVFDSINHKKR--SRHLDSSPTFPR 62
           MEL LGL+L P    K    FDLN H         L  + +  +      +++ +   P+
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 63  TTLPLLLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEG 122
             L  L  N  PN+ D     DPL + S+   ++EEE    +VGWPP+    K+  +K G
Sbjct: 61  QRLFAL--NGQPNEED----EDPLESESSIVYDDEEENSE-VVGWPPV----KTCMIKYG 120

Query: 123 V-----------------GRRAVIRRPAVKNDGGFWRG------LDLNNSRYVKVKMEGV 182
                             GRR       + N      G      +   +S YVKVKM+GV
Sbjct: 121 SYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGV 180

Query: 183 GIARKVDLREHHSFDALRATLMNMFDE-----TNSEGYRLTFQNTNGEWLLAENVTWRNF 216
            IARKVD++  +S+++L  +L+ MF E          Y  TFQ   G+WLL  +VTW+ F
Sbjct: 181 AIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIF 238

[Close]

BLAST of IVF0013627 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-14
Identity = 50/163 (30.67%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 79  SASSNDSDEEEEERENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKN 138
           SA S+        R + +VGWPP+   R          K+   +EG G + V++   +K 
Sbjct: 53  SAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK- 112

Query: 139 DGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDE---------- 198
           D        +    +VKV M+GVGI RKVD+R H S++ L  TL  MF            
Sbjct: 113 DVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKV 172

Query: 199 ------TNSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKL 216
                   S  + LT+++  G+W+L  +V WR FI  V+R+++
Sbjct: 173 KPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]

BLAST of IVF0013627 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 96  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEG 155
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSD---STKMRNSMFVKVTMDG 148

Query: 156 VGIARKVDLREHHSFDALRATLMNMFDE----------------------TNSEGYRLTF 215
           + I RK+DL  H  +++L  TL  MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 216 QNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 220
           ++  G+W+L  +V W  FIG V+R+++ K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of IVF0013627 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 96  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEG 155
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSD---STKMRNSMFVKVTMDG 148

Query: 156 VGIARKVDLREHHSFDALRATLMNMFDE----------------------TNSEGYRLTF 215
           + I RK+DL  H  +++L  TL  MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 216 QNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 220
           ++  G+W+L  +V W  FIG V+R+++ K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of IVF0013627 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 96  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGGFWRGLDLNNSRYVKVKMEG 155
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSD---STKMRNSMFVKVTMDG 148

Query: 156 VGIARKVDLREHHSFDALRATLMNMFDE----------------------TNSEGYRLTF 215
           + I RK+DL  H  +++L  TL  MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 216 QNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 220
           ++  G+W+L  +V W  FIG V+R+++ K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

The following BLAST results are available for this feature:

BLAST of IVF0013627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	2.4e-15	31.33	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
Q38830	6.5e-13	30.67	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38829	4.7e-11	28.48	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q6K846	7.9e-11	30.61	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]
Q5VRR0	2.3e-10	33.12	Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20...	[more]

BLAST of IVF0013627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8T8	1.0e-122	100.00	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1	[more]
A0A0A0LWC5	4.5e-110	93.64	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1	[more]
A0A6J1HA19	2.6e-73	68.20	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1	[more]
A0A6J1JF88	3.8e-72	68.20	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1	[more]
A0A6J1CTH1	2.0e-57	60.34	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014437 PE=3 SV=...	[more]

BLAST of IVF0013627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443966.1	3.67e-159	100.00	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo]	[more]
XP_004150206.2	2.02e-142	93.64	auxin-responsive protein IAA29 [Cucumis sativus]	[more]
KGN65132.1	3.76e-141	93.64	hypothetical protein Csa_023489 [Cucumis sativus]	[more]
XP_038879327.1	1.97e-120	81.17	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
KAG7023504.1	2.61e-94	67.27	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of IVF0013627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	1.7e-16	31.33	indole-3-acetic acid inducible 29	[more]
AT1G04550.2	4.6e-14	30.67	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.1	3.3e-12	28.48	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	3.3e-12	28.48	indole-3-acetic acid inducible 11	[more]
AT4G28640.3	3.3e-12	28.48	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 78..178 e-value: 4.4E-16 score: 59.5
None	No IPR available	GENE3D	3.10.20.90		coord: 126..220 e-value: 6.8E-19 score: 69.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..99
None	No IPR available	PANTHER	PTHR31734:SF38	AUXIN-RESPONSIVE PROTEIN IAA20	coord: 3..218
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 136..215
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 3..218
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 141..220 score: 15.914656

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013627.2	IVF0013627.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
molecular_function	GO:0005515	protein binding