IVF0013406 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGGCATGGGACTATGACTTGTAGTGATGTTTCTGCCTTTGTTCAAATTTCTAAACATTTTCAGTTTTATAAGCAAAAGTTGGATGAGGATCTTTACAATACATTGGTCATGTGCTCTAATTCAAGCTGTTGTCTTCCAGTTGGTCATGTGCTTGTCTCCTTTCTCAACACATTGGTCTTTTAGGTGGTTGGTGTCATATATTTACACACACACACATATGTTCATTCTTTTGTGCTAAAATCTTAGATGAAGCGTGTATTATGAGCGGGCACACACACAAAGAGGCTTGATTTTTCTAACAGAACGAGAATATATCAATGAAACTGGAAATACTCTTAGAAATGGTAACAATTTATAGCATAGGAAACCTTGCTGCGTTTATATTTTCTGAAACATTGACATTCTTATTTCTTGATTTATCTTTGCATATGACTGGATGTGTAATTAAATTCTTTGTTCTACTTTGTTCGTGAATGATTTGAACAAAGAAACAAGGGAAGATTTAATGAAAATTGCACGTTGCTTTGGCTATTCTAGACTCTGAGAAGCGTTTTGCCTTTTCCTGTACTGTGGTAATTGAGACACCTCACTAATTTTTACCTGAATGTCTTGAAACTTGTTTCTCTTTGTGTTTTTGAAGATAATAGGGATTACATGCAACTTTTCAAGTCTAGATGATTTTTAGTTTTATCATTGTCATGTTCAAAAACCTGTTTATACCATTGTTAAAATAATTTTAGAAAGACTTGAAGATTTTGAATAATGTAATTTTCTTCTTTATTAGATTCTCTAAATGGATCAAGAGGCTGCACGAACTGCTCGGGAATCGCTAGATCTCGCATTTCATATGTCTAATGTACTTGATTCCGGGATCGATCGCCACACTCTCTCTGTCCTCATTGCTCTCTGTGACATGGGTGTGAACCCTGAAGCTCTGGCTGCTGTTGTCAAGGAACTACGGCGGGAGCCACCCTCATCAGAGACCAACGTATCCAGTAACAAGTCATAA GTGGCATGGGACTATGACTTGTAGTGATGTTTCTGCCTTTGTTCAAATTTCTAAACATTTTCAGTTTTATAAGCAAAAGTTGGATGAGGATCTTTACAATACATTGGTCATGTGCTCTAATTCAAGCTGTTGTCTTCCAGTTGGTCATGTGCTTGTCTCCTTTCTCAACACATTGGTCTTTTAGGTGGTTGGTGTCATATATTTACACACACACACATATGTTCATTCTTTTGTGCTAAAATCTTAGATGAAGCGTGTATTATGAGCGGGCACACACACAAAGAGGCTTGATTTTTCTAACAGAACGAGAATATATCAATGAAACTGGAAATACTCTTAGAAATGGTAACAATTTATAGCATAGGAAACCTTGCTGCGTTTATATTTTCTGAAACATTGACATTCTTATTTCTTGATTTATCTTTGCATATGACTGGATGTGTAATTAAATTCTTTGTTCTACTTTGTTCGTGAATGATTTGAACAAAGAAACAAGGGAAGATTTAATGAAAATTGCACGTTGCTTTGGCTATTCTAGACTCTGAGAAGCGTTTTGCCTTTTCCTGTACTGTGGTAATTGAGACACCTCACTAATTTTTACCTGAATGTCTTGAAACTTGTTTCTCTTTGTGTTTTTGAAGATAATAGGGATTACATGCAACTTTTCAAGTCTAGATGATTTTTAGTTTTATCATTGTCATGTTCAAAAACCTGTTTATACCATTGTTAAAATAATTTTAGAAAGACTTGAAGATTTTGAATAATGTAATTTTCTTCTTTATTAGATTCTCTAAATGGATCAAGAGGCTGCACGAACTGCTCGGGAATCGCTAGATCTCGCATTTCATATGTCTAATGTACTTGATTCCGGGATCGATCGCCACACTCTCTCTGTCCTCATTGCTCTCTGTGACATGGGTGTGAACCCTGAAGCTCTGGCTGCTGTTGTCAAGGAACTACGGCGGGAGCCACCCTCATCAGAGACCAACGTATCCAGTAACAAGTCATAA ATGGATCAAGAGGCTGCACGAACTGCTCGGGAATCGCTAGATCTCGCATTTCATATGTCTAATGTACTTGATTCCGGGATCGATCGCCACACTCTCTCTGTCCTCATTGCTCTCTGTGACATGGGTGTGAACCCTGAAGCTCTGGCTGCTGTTGTCAAGGAACTACGGCGGGAGCCACCCTCATCAGAGACCAACGTATCCAGTAACAAGTCATAA MDQEAARTARESLDLAFHMSNVLDSGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPPSSETNVSSNKS Homology
BLAST of IVF0013406 vs. ExPASy Swiss-Prot
Match: Q9M0N8 (Mitotic-spindle organizing protein 1B OS=Arabidopsis thaliana OX=3702 GN=GIP1 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-20 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy Swiss-Prot
Match: Q9C9T3 (Mitotic-spindle organizing protein 1A OS=Arabidopsis thaliana OX=3702 GN=GIP2 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.6e-19 Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy Swiss-Prot
Match: A9NKD9 (Mitotic-spindle organizing protein 1 OS=Picea sitchensis OX=3332 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 8.2e-18 Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy Swiss-Prot
Match: B5FXZ4 (Mitotic-spindle organizing protein 1 OS=Taeniopygia guttata OX=59729 GN=mzt1 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.1e-09 Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy Swiss-Prot
Match: Q08AG7 (Mitotic-spindle organizing protein 1 OS=Homo sapiens OX=9606 GN=MZT1 PE=1 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 2.0e-08 Identity = 23/48 (47.92%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy TrEMBL
Match: A0A1S3B468 (mitotic-spindle organizing protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103485818 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy TrEMBL
Match: A0A0A0LMZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094370 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy TrEMBL
Match: A0A5D3DEX1 (Mitotic-spindle organizing protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001260 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy TrEMBL
Match: A0A5A7U684 (Mitotic-spindle organizing protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001560 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.0e-26 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of IVF0013406 vs. ExPASy TrEMBL
Match: A0A6J1I8U7 (mitotic-spindle organizing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111472550 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25 Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0
BLAST of IVF0013406 vs. NCBI nr
Match: XP_008441751.1 (PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441752.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441753.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441755.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441756.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441757.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo]) HSP 1 Score: 136 bits (343), Expect = 2.71e-40 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of IVF0013406 vs. NCBI nr
Match: XP_011649034.1 (mitotic-spindle organizing protein 1A [Cucumis sativus]) HSP 1 Score: 130 bits (328), Expect = 5.29e-38 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of IVF0013406 vs. NCBI nr
Match: XP_038889535.1 (mitotic-spindle organizing protein 1B [Benincasa hispida] >XP_038889536.1 mitotic-spindle organizing protein 1B [Benincasa hispida]) HSP 1 Score: 128 bits (322), Expect = 4.36e-37 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of IVF0013406 vs. NCBI nr
Match: TYK22231.1 (mitotic-spindle organizing protein 1A-like [Cucumis melo var. makuwa]) HSP 1 Score: 128 bits (321), Expect = 7.54e-37 Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of IVF0013406 vs. NCBI nr
Match: KAA0051413.1 (mitotic-spindle organizing protein 1A-like [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (317), Expect = 3.08e-36 Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of IVF0013406 vs. TAIR 10
Match: AT4G09550.1 (AtGCP3 interacting protein 1 ) HSP 1 Score: 100.1 bits (248), Expect = 7.4e-22 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of IVF0013406 vs. TAIR 10
Match: AT1G73790.1 (Protein of unknown function (DUF3743) ) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-20 Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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