IVF0013277 (gene) Melon (IVF77) v1

Overview
NameIVF0013277
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU6 snRNA phosphodiesterase
Locationchr09: 20382782 .. 20385789 (-)
RNA-Seq ExpressionIVF0013277
SyntenyIVF0013277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGACGAAGAAGTGGATACAGTGTCCCCTTCGTCAGCATCCACATCAACACCACAATTCTTCGATGAGACTGTGAGCTCTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTAGTGCCCTTCTTCTTCCTCCTTACATTTACATTCTTTATTTTTCTACTTTCTAACGTTGCTTATCAACTTTTTCGATATTTCTTGTTTAGGTGTCTTGGATGACTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTCCTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGGTATGTGAACCCATGTAGTAGTTCTTCTAATCTGATTCTTAAACTTAGTTTTCCTATTTCCATTTTGATCCACCCAATGGGGATTTTTTTTTTTTTTATATATTTGGAAATACTTGTTACTCTTTATCGGCGTATTGTTAGTTGGAACAACTACGACTCTATTTCTAGGGAGCTCTTCTTTGGTTGATCACTGATTCATTATTAACGAGTAGTTGTTAGAGTCTAGATTGGAATCAATATCAATGTCTAACAATTAGTCATAAACCTCGGTTTTTTGGCCACTCTTACAATGTTGTCTTCTTGAAATATATGTTGATTTCATGTTGGGTTATGCCTCTCAAACCTTTAGGTAGCCTCTTAAACATTGATTAGTAAAACTTATCACTTGCATGCATTTCAGTTCATGTCCCTTTGATTTACTTAAGAAAAAAATAAAATATTTTTCAAGAAACTCATTTTTTAGAAAATTGTTTAAAATATACTTAAAAATAGTTTTTGAGAAGCTTCCAACACTCTAATTTTTTTTCGAAATAACTTATTTTTTAAATTAAACACTTGAAAATGTAATCCAAATACACCATATATTTTTGCCTTTATTGTACCTTATGGAATTCTAGAATATCATAATGAACCAGCGAAGAATATCAATAATATCTAAGATAATGTTTCATTAATACCTTCAAGTGTCAGTTGATGGGTGATTTTATACTGCTGGGCGTTTTGGCTCTAGAATTAAAACTTCCTCTAAGCTTCTTTTGTCAATTGAAGCACTTTCACCAAATGCTGTGATCGATGCATCTACAATCCTCTAAATGTTCGTAATTGATGAGGAAAAGTAGATAAAGTATATGACTTATTTAAAAGAAGTATACATGCCTTTTTGGTATAATTTTGCAGGTTTCTGTTTAGTTTATTGATTTATAATCTAAAAATTTAAAAAGATTCTGAACATCGACAAGATAAACATTCACAATTACATGAATCTAAATAATTGTTGTGATTTTCATTTGTTCTATGCAATACGACTTTTCACGTGGATGCCCATGCCCAGCTAAAAATATTTGATTTTTCATGTTCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCTGCTCTCCATCTGGTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCCCCAAGGCGGTAAGCTAAAAGTTTAGAACTCTTCATTTAGTTTGATTAGTAATTTCCAACTTGTTATTGTATTTAACTTGTGCTTTTCTTAAACAGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGGTACGTCACATTTGAGGGATTTCCGTTTTCGTTATCTCTGCATTTCTGTAGTAAATGTGCTTTTCTGGATTCTCAGTTTTTGGGCCAATAATATGGAAGCTTCCACTTCTGTTTTAGTTTCTTAGTTAGATTATAGTTAACCCTTTACCTCACTTGTGGGTTTGATTTATGCATCTGATGCATGGATAAATTTTTTTGAATTAGAGTATTAGACTATAATTTTTAAACAGGATCTTGTAGGACGAGACAAATTTTCTATAGAAATTGTTGAGGTTTACCAAACACATATACGGATGCATTTGCCTAGATGTGTTTTGCACTCTTGTTATTAAAAAATTAAAAGTTAATTACAATGAGCAGCTATTTTAGGGATAATAATTAAGTGTTATAACAACATTTTAATAAAATTGTAATTATAGCAAATTCTATCAACGGTAGACTCCTATCGCAAATAAGCTCTTGGCCTATCAGTGATAGACAATATTTGCAATATAGTTCATATGACAAAATTCGTCATATTTATAATTATTTGAACTTTTACTATATTTGTTAATACTTTGAATCTAAATGCTCTCTTTAGTATTGTTATTCTCTCTGACACTCTCATGTGATGTTTTGAAATTACAAGTTTATAATTGTAAACTCAAGAACAAACTTGTTTGTTAGGCCATTTTAGTTTGAGATGTTTGTTGACATAGTTTATGTATGATGATTTCATGAGTTTTACATGGTTGAGATTCACAATATTACATGGGATTAAAGAGTTGATCCCTTTGTTATCAATTGGCTGCAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGTTAATTACATTAACTATTTTTTCCCCTTTTCATCTTTATTCAATTATCGAGGAAGATGATCTCCTAGAGTACTCTGTTTTTTTAGGAAGCAAGACCGCATATATCTCTTGCCTGGGCATTAGGTGACGTTAGTCAAATATCGAGTCAAGCAGTTCATAATGAATTAAAAAGGTCCGCAGTTAAGGAACCATTTAAGAGATGTATTTTCACCACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTGCTGACGAATGA

mRNA sequence

ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGACGAAGAAGTGGATACAGTGTCCCCTTCGTCAGCATCCACATCAACACCACAATTCTTCGATGAGACTGTGAGCTCTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTCTTGGATGACTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTCCTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCTGCTCTCCATCTGGTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCCCCAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCGCATATATCTCTTGCCTGGGCATTAGGTGACGTTAGTCAAATATCGAGTCAAGCAGTTCATAATGAATTAAAAAGGTCCGCAGTTAAGGAACCATTTAAGAGATGTATTTTCACCACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTGCTGACGAATGA

Coding sequence (CDS)

ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGACGAAGAAGTGGATACAGTGTCCCCTTCGTCAGCATCCACATCAACACCACAATTCTTCGATGAGACTGTGAGCTCTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTCTTGGATGACTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTCCTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCTGCTCTCCATCTGGTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCCCCAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCGCATATATCTCTTGCCTGGGCATTAGGTGACGTTAGTCAAATATCGAGTCAAGCAGTTCATAATGAATTAAAAAGGTCCGCAGTTAAGGAACCATTTAAGAGATGTATTTTCACCACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTGCTGACGAATGA

Protein sequence

MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
Homology
[Close]
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match: Q91W78 (U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-22
Identity = 81/274 (29.56%), Postives = 134/274 (48.91%), Query Frame = 0 

Query: 8   YGGSSSDEEVDTVSP--SSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPID 67
           Y  S S++E + V+   S   T   +     V S  LP P   L  FP++    +D    
Sbjct: 9   YSSSGSEDEAEAVAAGRSKPGTGFHRCGQNPVPSEKLPVPDSVLSMFPSTEEGPEDDSAK 68

Query: 68  QATRVRSFPHVQGNYALHVYIPGGGLVYE--ENF--LTCACSPSGDIDIPLDVLCKDDHK 127
              R+R+FPH +GN+A H+YIP     YE  E+F  L  A  P   + +P  VL +    
Sbjct: 69  HGGRIRTFPHERGNWATHIYIP-----YEAKEDFRDLLDALLPRAQMFVPRLVLME---- 128

Query: 128 LEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTF 187
                  EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF
Sbjct: 129 -------EFHVSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEKTRTF 188

Query: 188 LSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS-QISSQAVHN 247
           + +E ++ G  +    +  V+   K  +L  FY++   HISLAW +GD S Q+  Q +  
Sbjct: 189 IGLE-VSSGHAQFLDLVSEVDRAMKEFDLTTFYQDPSFHISLAWCVGDASLQLEGQCL-Q 248

Query: 248 ELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI 275
           EL+    +      +     N + CK G K + +
Sbjct: 249 ELQEIVDEFEDSEMLLRVLANQVRCKSGNKFFSM 264

[Close]
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match: Q5I0I5 (U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.2e-21
Identity = 78/274 (28.47%), Postives = 128/274 (46.72%), Query Frame = 0 

Query: 8   YGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLP----PPPLSLLN-FPNSTCVLDDL 67
           Y  S S++E + V   +A  S P          PLP    P P S+LN FP++    +D 
Sbjct: 9   YSSSGSEDEAEAV---AAGRSKPGSGLHRCGQNPLPSQRFPVPDSVLNMFPSTEEGPEDD 68

Query: 68  PIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKL 127
                 R+R+FPH +GN+A H+YIP     YE N          +    LDVL       
Sbjct: 69  SARHGGRIRTFPHERGNWATHIYIP-----YEAN---------EEFQDLLDVLLPRAQMF 128

Query: 128 EQALAR--EFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRT 187
              L +  EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RT
Sbjct: 129 APRLVQMEEFHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEKTRT 188

Query: 188 FLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHN 247
           F+ +E ++ G  +    +  V+ V K  +L  FY++   H+SLAW +GD           
Sbjct: 189 FIGLE-VSSGHAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAWCVGDARLQLEGQCQQ 248

Query: 248 ELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI 275
           EL+    +      +       + CK G K + +
Sbjct: 249 ELQEIVDEFEDSEMLLRVLAEQVRCKSGNKFFSM 264

[Close]
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match: Q7ZYI9 (U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 77/240 (32.08%), Postives = 121/240 (50.42%), Query Frame = 0 

Query: 41  PLPPPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPGGGLVYEEN 100
           PLPPP   L  F +   +  D  +D+ T    R+RSF H +GN+A +VYIP      +E 
Sbjct: 26  PLPPPTTVLRMFQD---MEGDEDLDENTKHEGRIRSFKHERGNWATYVYIP---FQPQEE 85

Query: 101 FLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKL 160
           FL         +D  + V  ++   L +    EFHIS S+TV +R H I+  V  L+ KL
Sbjct: 86  FLDL-------LDELVSVAAENGVLLTK--MSEFHISQSQTVVLRHHWINPFVESLKDKL 145

Query: 161 QSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKE 220
               R+     + + + N + +RTFL +E ++ G+  + + +  V+   +  NL  FY+E
Sbjct: 146 HCMYRFLCIAERIKVYTNQEKTRTFLGLE-VSVGMEHLLEVVSEVDRSLQEFNLQTFYQE 205

Query: 221 ARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNG--IECKIGKKMYKI 275
              H+SLAW +GD  +    +   EL++  V + F+     T+FN   I CK G K + I
Sbjct: 206 PSFHVSLAWCVGDKYEKLKGSCLLELQK--VIDRFEDSDTLTRFNAEEIRCKAGNKTFCI 247

[Close]
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match: Q9BQ65 (U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-19
Identity = 76/246 (30.89%), Postives = 119/246 (48.37%), Query Frame = 0 

Query: 41  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYE- 100
           PLP    P P S+LN FP +    +D       RVR+FPH +GN+A HVY+P     YE 
Sbjct: 37  PLPRQRFPVPDSVLNMFPGTEEGPEDDSTKHGGRVRTFPHERGNWATHVYVP-----YEA 96

Query: 101 -ENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAR--EFHISLSRTVPIRVHQIDSIVTM 160
            E FL             LDVL          L R   FH+SLS++V +R H I   V  
Sbjct: 97  KEEFLDL-----------LDVLLPHAQTYVPRLVRMKVFHLSLSQSVVLRHHWILPFVQA 156

Query: 161 LRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLP 220
           L+ ++ S  R++   ++ + + N + +RTF+ +E +T G  +    +  V+ V +  NL 
Sbjct: 157 LKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLE-VTSGHAQFLDLVSEVDRVMEEFNLT 216

Query: 221 EFYKEARPHISLAWALGDVS-QISSQAVHNELKRSAVKEPFK--RCIFTTKFNGIECKIG 275
            FY++   H+SLAW +GD   Q+  Q +    +  A+ + F+    +       + CK G
Sbjct: 217 TFYQDPSFHLSLAWCVGDARLQLEGQCLQ---ELQAIVDGFEDAEVLLRVHTEQVRCKSG 262

[Close]
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match: Q6DEF6 (U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-18
Identity = 83/285 (29.12%), Postives = 129/285 (45.26%), Query Frame = 0 

Query: 7   SYGGSSSDEEVDTVSPSSA-----STSTPQFFD------------ETVSSLPLPPPPLSL 66
           +Y  SSS+EE  + S  S       T T +  D                 LPLP     +
Sbjct: 4   NYSSSSSEEESGSSSSPSGKRQKLDTETSEALDHGSAQRKVCKSSHLTPRLPLPESVKEM 63

Query: 67  LNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDID 126
             F +S  +  D   +   R+RSF H +GN+A +V+ P      EE FL           
Sbjct: 64  --FRDSEELWTDKSEEHGGRLRSFQHERGNWATYVFFPYDP---EEAFLEV--------- 123

Query: 127 IPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKW 186
           +   +   + H +   ++ EFH+SLS+TV +R H I   V  +R  L   ++++    K 
Sbjct: 124 LNKMMAAAEAHDIPLTVSEEFHLSLSKTVVLRHHWIQPFVQSIRTSLTHFQKFYCVAYKL 183

Query: 187 ETFVNDDLSRTFLSMEIITG--GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWAL 246
           + + N + +RTFL ME+ TG   L+E+ K   +V+E  K  NL  FY++   HISLAW +
Sbjct: 184 KVYSNAEKTRTFLGMEVSTGTPHLLELSK---IVDETMKEFNLSTFYEDPSFHISLAWCV 243

Query: 247 GDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMY 273
           GD ++   +A   EL+                 N + CK G K++
Sbjct: 244 GDQTERLKKACLLELQGLIDAHEDGPFHARLNCNELRCKTGNKVF 271

[Close]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match: A0A1S3CTB0 (U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.8e-141
Identity = 262/289 (90.66%), Postives = 264/289 (91.35%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDIDIP 120
           DLPIDQATRVRSFPHVQGNYALHVYIP            L  ++           DIDIP
Sbjct: 61  DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET
Sbjct: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
           FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240

Query: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
           QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
Sbjct: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 289

[Close]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match: A0A0A0KPH5 (U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 252/289 (87.20%), Postives = 257/289 (88.93%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLD
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDIDIP 120
           DLPIDQATRVRSFPHVQGNYALHVYIP            L  ++           DIDIP
Sbjct: 61  DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           LDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET
Sbjct: 121 LDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
           FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVS
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVS 240

Query: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
           Q+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Sbjct: 241 QLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE 289

[Close]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match: A0A6J1EQH7 (U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.2e-119
Identity = 227/291 (78.01%), Postives = 242/291 (83.16%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCV 60
           M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  
Sbjct: 1   MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSA 60

Query: 61  LDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDID 120
           LDDLPI QA RVRSFPHVQGNYALH+YIP            L  ++           DID
Sbjct: 61  LDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKLVPALHLVDID 120

Query: 121 IPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKW 180
           IPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKW
Sbjct: 121 IPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKW 180

Query: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGD 240
           ETFVNDDLSRTFLSMEII GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD
Sbjct: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGD 240

Query: 241 VSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
           +S++ SQ+VH+E+K+S VKE  KR IFT KFNGIECKIGKKM+KICKF DE
Sbjct: 241 LSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGKKMFKICKFPDE 291

[Close]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match: A0A6J1HYN3 (U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.8e-118
Identity = 226/297 (76.09%), Postives = 243/297 (81.82%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTST--------PQFFDETVSSLPLPPPPLSLLNF 60
           M+AL ASYGGSSSDE+ DTVSPSSAS S         PQ  DET S LPLPPPPLSLL+F
Sbjct: 1   MEALMASYGGSSSDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLLDF 60

Query: 61  PNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACS 120
           PNST  LDDLPI QA RVRSFPHVQGNYA+H+YIP            L  ++        
Sbjct: 61  PNSTSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPAL 120

Query: 121 PSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYW 180
              DIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYW
Sbjct: 121 HLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISL 240
           IDFSKWETFVNDDLSRTFLSMEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHISL
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
           AWALGD+S++ SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKF DE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIECKIGKKMFKICKFPDE 297

[Close]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match: A0A6J1DNL4 (U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 9.9e-102
Identity = 208/293 (70.99%), Postives = 226/293 (77.13%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           MDAL+ASY GSSSDEE D VS + +  S P           LPPPPLSLL+FPNS   L 
Sbjct: 1   MDALKASYRGSSSDEEDDIVSTAPSDLSPPP------PPPSLPPPPLSLLDFPNSISALH 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEEN--------FLTCACS--PS---GD 120
           DLPI Q TR RSFPHV+GNYALHVYIP    VY           FL    S  PS    D
Sbjct: 61  DLPIAQPTRFRSFPHVEGNYALHVYIP----VYIPTTSKKEVVLFLKKVSSLVPSLHLVD 120

Query: 121 IDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFS 180
           ID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFS
Sbjct: 121 IDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFS 180

Query: 181 KWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWAL 240
           KWETFVNDDLSRTFLSMEII GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHISLAWAL
Sbjct: 181 KWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWAL 240

Query: 241 GDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
           GD+S++ S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK  DE
Sbjct: 241 GDLSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIECKIGKKTYKICKSPDE 282

[Close]
BLAST of IVF0013277 vs. NCBI nr
Match: XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo])

HSP 1 Score: 507 bits (1306), Expect = 3.49e-180
Identity = 262/289 (90.66%), Postives = 264/289 (91.35%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDIDIP 120
           DLPIDQATRVRSFPHVQGNYALHVYIP            L  ++           DIDIP
Sbjct: 61  DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET
Sbjct: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
           FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240

Query: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 280
           QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
Sbjct: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 289

[Close]
BLAST of IVF0013277 vs. NCBI nr
Match: XP_004143673.1 (U6 snRNA phosphodiesterase [Cucumis sativus] >KGN50332.1 hypothetical protein Csa_000253 [Cucumis sativus])

HSP 1 Score: 488 bits (1257), Expect = 1.02e-172
Identity = 252/289 (87.20%), Postives = 257/289 (88.93%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLD
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDIDIP 120
           DLPIDQATRVRSFPHVQGNYALHVYIP            L  ++           DIDIP
Sbjct: 61  DLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           LDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET
Sbjct: 121 LDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
           FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVS
Sbjct: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVS 240

Query: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 280
           Q+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Sbjct: 241 QLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE 289

[Close]
BLAST of IVF0013277 vs. NCBI nr
Match: XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida])

HSP 1 Score: 454 bits (1167), Expect = 5.61e-159
Identity = 238/291 (81.79%), Postives = 252/291 (86.60%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTS--TPQFFDETVSSLPLPPPPLSLLNFPNSTCV 60
           MDALRASYGGSSSDEE DTVSPSSASTS  TPQ  DETVS LPLPPP  SLL+FPNST +
Sbjct: 1   MDALRASYGGSSSDEEADTVSPSSASTSASTPQLSDETVSFLPLPPPSPSLLHFPNSTSI 60

Query: 61  LDDLPIDQATRVRSFPHVQGNYALH----VYIPGGGLVYEENFLTCACS--PS---GDID 120
           LDDLPIDQATRVRSFPHVQGNYALH    VY+P  G      FL    S  P+    DID
Sbjct: 61  LDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPALHLVDID 120

Query: 121 IPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKW 180
           +PLDVLCKDDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKW
Sbjct: 121 VPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKW 180

Query: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGD 240
           ETFVNDDLSRTFLSMEIITGGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHISLAWA+GD
Sbjct: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISLAWAIGD 240

Query: 241 VSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 280
           +S++ SQAVHNE+K SAV +  KRCIFTTKF GIECKIGKK+YKICKF DE
Sbjct: 241 LSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIECKIGKKIYKICKFPDE 291

[Close]
BLAST of IVF0013277 vs. NCBI nr
Match: XP_023549871.1 (U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435 bits (1119), Expect = 1.23e-151
Identity = 227/293 (77.47%), Postives = 243/293 (82.94%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTST----PQFFDETVSSLPLPPPPLSLLNFPNST 60
           M+AL ASYGGSSSDE+VDTVSPSSAS S     PQ  DET S LPLPPPPLSLL+FPNST
Sbjct: 1   MEALMASYGGSSSDEDVDTVSPSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNST 60

Query: 61  CVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGD 120
             LDDLPI QA RVRSFPHVQGNYA+H+YIP            L  ++           D
Sbjct: 61  SALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPALHLVD 120

Query: 121 IDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFS 180
           IDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFS
Sbjct: 121 IDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFS 180

Query: 181 KWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWAL 240
           KWETFVNDDLSRTFLSMEII GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWAL
Sbjct: 181 KWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWAL 240

Query: 241 GDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 280
           GD+S++ SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKF DE
Sbjct: 241 GDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIECKIGKKMFKICKFPDE 293

[Close]
BLAST of IVF0013277 vs. NCBI nr
Match: XP_022928923.1 (U6 snRNA phosphodiesterase [Cucurbita moschata])

HSP 1 Score: 433 bits (1114), Expect = 6.58e-151
Identity = 227/291 (78.01%), Postives = 242/291 (83.16%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCV 60
           M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  
Sbjct: 1   MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSA 60

Query: 61  LDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGLVYEENFLTCACSPSGDID 120
           LDDLPI QA RVRSFPHVQGNYALH+YIP            L  ++           DID
Sbjct: 61  LDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKLVPALHLVDID 120

Query: 121 IPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKW 180
           IPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKW
Sbjct: 121 IPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKW 180

Query: 181 ETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGD 240
           ETFVNDDLSRTFLSMEII GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD
Sbjct: 181 ETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGD 240

Query: 241 VSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 280
           +S++ SQ+VH+E+K+S VKE  KR IFT KFNGIECKIGKKM+KICKF DE
Sbjct: 241 LSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGKKMFKICKFPDE 291

[Close]
BLAST of IVF0013277 vs. TAIR 10
Match: AT5G51170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 298.5 bits (763), Expect = 5.6e-81
Identity = 159/289 (55.02%), Postives = 193/289 (66.78%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           M+ALRASYG SSSD + D +SP+S  T+     D    S+ LPPPPL+LL+   ST  LD
Sbjct: 1   MEALRASYGDSSSDSDTDDLSPASPVTANSGEKD----SISLPPPPLALLDSIVSTGSLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDI---------DIP 120
               +   RVR+FPHV GNYALHVY+P       +  + C       +         D+P
Sbjct: 61  FFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVEADVP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           L +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE 
Sbjct: 121 LSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFNKWEV 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS 240
           FVNDD +R+FLS+EI T GL EI KQI  VNEVYKLHNLPEFYK+ RPHISL WALGD+ 
Sbjct: 181 FVNDDHTRSFLSLEITTSGLSEISKQIDAVNEVYKLHNLPEFYKDPRPHISLVWALGDIR 240

Query: 241 QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE 281
                AV  EL++       +  IFT+KF GIECKIG K +KICK  DE
Sbjct: 241 TSLKGAVDVELRKLRAGGCVQNRIFTSKFCGIECKIGNKTHKICKLPDE 285

[Close]
BLAST of IVF0013277 vs. TAIR 10
Match: AT5G51170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-50
Identity = 106/210 (50.48%), Postives = 138/210 (65.71%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLD 60
           M+ALRASYG SSSD + D +SP+S  T+     D    S+ LPPPPL+LL+   ST  LD
Sbjct: 1   MEALRASYGDSSSDSDTDDLSPASPVTANSGEKD----SISLPPPPLALLDSIVSTGSLD 60

Query: 61  DLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDI---------DIP 120
               +   RVR+FPHV GNYALHVY+P       +  + C       +         D+P
Sbjct: 61  FFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVEADVP 120

Query: 121 LDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWET 180
           L +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE 
Sbjct: 121 LSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFNKWEV 180

Query: 181 FVNDDLSRTFLSMEIITGGLMEIRKQIQVV 202
           FVNDD +R+FLS+EI T GL E+  ++ ++
Sbjct: 181 FVNDDHTRSFLSLEITTSGLSEVLSKLMLL 206

The following BLAST results are available for this feature:
BLAST of IVF0013277 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q91W785.7e-2229.56U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1[more]
Q5I0I58.2e-2128.47U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1[more]
Q7ZYI92.0e-1932.08U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1[more]
Q9BQ652.7e-1930.89U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1[more]
Q6DEF62.2e-1829.12U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1[more]
BLAST of IVF0013277 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CTB02.8e-14190.66U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1[more]
A0A0A0KPH51.4e-13587.20U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1[more]
A0A6J1EQH75.2e-11978.01U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV... [more]
A0A6J1HYN35.8e-11876.09U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1[more]
A0A6J1DNL49.9e-10270.99U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 S... [more]
BLAST of IVF0013277 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008467330.13.49e-18090.66PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo][more]
XP_004143673.11.02e-17287.20U6 snRNA phosphodiesterase [Cucumis sativus] >KGN50332.1 hypothetical protein Cs... [more]
XP_038875354.15.61e-15981.79U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida][more]
XP_023549871.11.23e-15177.47U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo][more]
XP_022928923.16.58e-15178.01U6 snRNA phosphodiesterase [Cucurbita moschata][more]
BLAST of IVF0013277 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51170.15.6e-8155.02unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0... [more]
AT5G51170.21.7e-5050.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027521U6 snRNA phosphodiesterase Usb1PFAMPF09749HVSLcoord: 43..275
e-value: 4.7E-52
score: 176.8
IPR027521U6 snRNA phosphodiesterase Usb1PANTHERPTHR13522UNCHARACTERIZEDcoord: 1..279
IPR027521U6 snRNA phosphodiesterase Usb1HAMAPMF_03040USB1coord: 3..277
score: 26.115398
NoneNo IPR availableGENE3D3.90.1140.10Cyclic phosphodiesterasecoord: 72..275
e-value: 2.6E-49
score: 169.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0013277.1IVF0013277.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0034477 U6 snRNA 3'-end processing
cellular_component GO:0005634 nucleus
molecular_function GO:1990838 poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends
molecular_function GO:0004518 nuclease activity