IVF0013043 (gene) Melon (IVF77) v1

Overview


Name	IVF0013043
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Octicosapeptide/Phox/Bem1p domain-containing family protein
Location	chr04: 10357159 .. 10357437 (+)
RNA-Seq Expression	IVF0013043
Synteny	IVF0013043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCCTCAAGTATCAGTTGGTTCTTGAAGATCTAGATGTTTTAGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATAGGCTTGATGAGTATGATTGCCTAGAAAGTGAAGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAATTTTCATTAAGGCTCAGCCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

mRNA sequence

ATGGTCCTCAAGTATCAGTTGGTTCTTGAAGATCTAGATGTTTTAGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATAGGCTTGATGAGTATGATTGCCTAGAAAGTGAAGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAATTTTCATTAAGGCTCAGCCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

Coding sequence (CDS)

ATGGTCCTCAAGTATCAGTTGGTTCTTGAAGATCTAGATGTTTTAGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATAGGCTTGATGAGTATGATTGCCTAGAAAGTGAAGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAATTTTCATTAAGGCTCAGCCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

Protein sequence

MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSNPQQIEQRYFEAINGIVWSGSFANVKLSRSTAN

Homology

[Close]

BLAST of IVF0013043 vs. ExPASy TrEMBL
Match: A0A5D3E246 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00090 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 93
          PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. ExPASy TrEMBL
Match: A0A5A7UL31 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00210 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.2e-42
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKHR+D YDCLESEGKLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRIDGYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 93
          PQQIEQRYFEAINGIVWSGSFANVKLSR TAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRCTAN 92

[Close]

BLAST of IVF0013043 vs. ExPASy TrEMBL
Match: A0A5A7U7T5 (PB1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002390 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.9e-42
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKHRLDEYDCLESE KLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRLDEYDCLESERKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 93
          PQQIEQRYFEAIN IVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. ExPASy TrEMBL
Match: A0A5A7T2V3 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00140 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 88/92 (95.65%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQ FLFPSNPIFIKAQ FSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQFFLFPSNPIFIKAQSFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 93
          PQQIEQRYFEAIN IV SGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVRSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. ExPASy TrEMBL
Match: A0A5A7T3H0 (Tub domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00470 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 18  VRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSNPQQIEQRYFEAINGIVW 77
           +RSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFI+AQPFSSNPQQIEQRYFEAINGIVW
Sbjct: 101 LRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIEAQPFSSNPQQIEQRYFEAINGIVW 160

Query: 78  SGSFANVKLSRSTAN 93
           SGSFANVKLS STAN
Sbjct: 161 SGSFANVKLSHSTAN 175

[Close]

BLAST of IVF0013043 vs. NCBI nr
Match: KAA0053093.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >KAA0065720.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >TYK29946.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 185 bits (470), Expect = 5.04e-59
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92
          PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. NCBI nr
Match: KAA0056522.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >TYK12092.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (455), Expect = 9.81e-57
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKHR+D YDCLESEGKLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRIDGYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92
          PQQIEQRYFEAINGIVWSGSFANVKLSR TAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRCTAN 92

[Close]

BLAST of IVF0013043 vs. NCBI nr
Match: KAA0051822.1 (hypothetical protein E6C27_scaffold60G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (454), Expect = 1.39e-56
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKHRLDEYDCLESE KLQCFLFPSNPIFIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRLDEYDCLESERKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92
          PQQIEQRYFEAIN IVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. NCBI nr
Match: KAA0037802.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 170 bits (430), Expect = 6.40e-53
Identity = 88/92 (95.65%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQ FLFPSNPIFIKAQ FSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQFFLFPSNPIFIKAQSFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92
          PQQIEQRYFEAIN IV SGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVRSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0013043 vs. NCBI nr
Match: KAA0037880.1 (uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (384), Expect = 8.58e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 18  VRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSNPQQIEQRYFEAINGIVW 77
           +RSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFI+AQPFSSNPQQIEQRYFEAINGIVW
Sbjct: 101 LRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIEAQPFSSNPQQIEQRYFEAINGIVW 160

Query: 78  SGSFANVKLSRSTAN 92
           SGSFANVKLS STAN
Sbjct: 161 SGSFANVKLSHSTAN 175

[Close]

BLAST of IVF0013043 vs. TAIR 10
Match: AT5G49920.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.2e-18
Identity = 44/76 (57.89%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60
           +VLKYQ++ EDLD LVSV+SDED+KH ++EY+  E+  KL+ FLFP+NP+ +++Q     
Sbjct: 62  IVLKYQIIPEDLDALVSVKSDEDVKHMIEEYNRHETP-KLRTFLFPANPVVLESQLGPIE 121

Query: 61  PQQIEQRYFEAINGIV 77
           PQ IEQRY EAINGI+
Sbjct: 122 PQTIEQRYIEAINGIL 136

[Close]

BLAST of IVF0013043 vs. TAIR 10
Match: AT1G79570.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 2   VLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEG---KLQCFLFPSNPIFIKAQPFS 61
           V+KYQL  EDLD LVSV S+EDL++ L+EY+ +E+ G   KL+ FLF  + +       +
Sbjct: 230 VVKYQLPGEDLDALVSVSSEEDLQNMLEEYNEMENRGGSQKLRMFLFSISDMDDALLGVN 289

Query: 62  SNPQQIEQRYFEAINGI-VWSGSFAN-VKLSRSTAN 93
            N    E +Y  A+NG+ + SG  +  + L  S+AN
Sbjct: 290 KNDGDSEFQYVVAVNGMDIGSGKNSTLLGLDSSSAN 325

[Close]

BLAST of IVF0013043 vs. TAIR 10
Match: AT3G46920.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCL-----ESEGKLQCFLFPSNPIFIKAQ 60
           +V+KYQL  EDLD LVSV S ED+ + ++E++ L     +  GKL+ FLF ++   +   
Sbjct: 127 VVVKYQLPDEDLDALVSVSSSEDIDNMMEEFEKLVERSSDGSGKLRVFLFDASSSEVD-D 186

Query: 61  PFS----SNPQQIEQRYFEAINGIVWS 79
            F      +   I QRY EA+NG+V S
Sbjct: 187 SFGILEYGDGVDIGQRYVEAVNGVVVS 212

[Close]

BLAST of IVF0013043 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 4   KYQLVLEDLDVLVSVRSDEDLKHRLDEYDCL----ESEGKLQCFLFPSNPI 51
           KYQL  EDLD L+SV +DEDL+H + EYD L        +++ FLFPS+PI
Sbjct: 100 KYQLPGEDLDALISVTNDEDLEHMMHEYDRLLRLSTKPARMRLFLFPSSPI 150

[Close]

BLAST of IVF0013043 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCL----ESEGKLQCFLFPSNPIFIKAQP 60
           +  KYQL  EDLD L+SV +D+DL+H + EYD L        +++ FLFP++  F     
Sbjct: 103 VTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLLRLSSKPARMRLFLFPASSGF----G 162

Query: 61  FSSNPQQIEQRYFEAINGI 76
             S+ Q    R+ EA+N +
Sbjct: 163 SQSSTQSDRDRFVEALNTV 177

The following BLAST results are available for this feature:

BLAST of IVF0013043 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E246	4.0e-44	100.00	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7UL31	2.2e-42	95.65	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7U7T5	2.9e-42	96.74	PB1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7T2V3	1.8e-39	95.65	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7T3H0	4.9e-34	96.00	Tub domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of IVF0013043 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053093.1	5.04e-59	100.00	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0056522.1	9.81e-57	95.65	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0051822.1	1.39e-56	96.74	hypothetical protein E6C27_scaffold60G002390 [Cucumis melo var. makuwa]	[more]
KAA0037802.1	6.40e-53	95.65	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0037880.1	8.58e-45	96.00	uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0013043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49920.1	2.2e-18	57.89	Octicosapeptide/Phox/Bem1p family protein	[more]
AT1G79570.1	1.6e-08	40.63	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]
AT3G46920.1	1.3e-07	40.23	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]
AT5G09620.1	1.7e-07	52.94	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G64430.1	3.0e-07	37.97	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 3..46 e-value: 1.1E-5 score: 25.2
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 1..81
None	No IPR available	PANTHER	PTHR31066:SF47	OS05G0427100 PROTEIN	coord: 1..81
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 2..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013043.1	IVF0013043.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding