IVF0012820 (gene) Melon (IVF77) v1

Overview


Name	IVF0012820
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase RING1-like
Location	chr05: 26235466 .. 26236011 (-)
RNA-Seq Expression	IVF0012820
Synteny	IVF0012820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTTTATTACTTACACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAGATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTTTGAACAACTTGTATTCAACGATTACTAAGAGCAGAC

mRNA sequence

CTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTTTATTACTTACACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAGATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTTTGAACAACTTGTATTCAACGATTACTAAGAGCAGAC

Coding sequence (CDS)

ATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTTTATTACTTACACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAGATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAG

Protein sequence

MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV

Homology

[Close]

BLAST of IVF0012820 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-11
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 40  PPPV---VVADLPTVATDD-------ACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLS 99
           PPP     +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL 
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260

Query: 100 VGDSCPLCRRHIAPGDKTETSKTVQ 115
           + D+CP+CR+ +   D T  S++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]

BLAST of IVF0012820 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 40  PPPV---VVADLPTVA-------TDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLS 99
           PPP     +  LPTV        T   C VC ED+  +E  +Q+PC H +H SCI  WL 
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261

Query: 100 VGDSCPLCRRHIAPGDKTETSKT 113
           + D+CP+CR+ +   D T  +++
Sbjct: 262 LHDTCPVCRKSLNGEDSTRQTQS 284

[Close]

BLAST of IVF0012820 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10
Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 36  TAVAPPPVVVADLPTVATDDA---CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGD 95
           +A+   P++  D PT    D+   CAVC E+F+     +++PC H+YH  CI  WL++ +
Sbjct: 178 SAIEALPLIEID-PTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 237

Query: 96  SCPLCRRHIAPGDKTE 109
           SCP+CR  +   D T+
Sbjct: 238 SCPVCRHELPAEDLTD 252

[Close]

BLAST of IVF0012820 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 57  CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQ 115
           CAVCM+DF      KQ+PC H+YH+ C+  WL + +SCP+C RH  P D  +  + V+
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVC-RHELPTDDPDYERRVR 280

[Close]

BLAST of IVF0012820 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.8e-10
Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 40  PPPV---VVADLPTVATDD-------ACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLS 99
           PPP     +  LPTV   +        C VC ED+   E  +Q+PC H++H SCI  WL 
Sbjct: 204 PPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE 263

Query: 100 VGDSCPLCRRHIAPGDKTETS 111
             DSCP+CR+ +  G  T T+
Sbjct: 264 QHDSCPVCRKSLT-GQNTATN 283

[Close]

BLAST of IVF0012820 vs. ExPASy TrEMBL
Match: A0A5A7V793 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00900 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.9e-61
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVC 60
           MATSANHAARYIMDIESMFDLDTVLSGADDFYY HTAVAPPPVVVADLPTVATDDACAVC
Sbjct: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVC 60

Query: 61  MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 116
           MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV
Sbjct: 61  MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of IVF0012820 vs. ExPASy TrEMBL
Match: A0A0A0LEZ1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53
Identity = 102/116 (87.93%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTV-ATDDACAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYY HT VAPPPV+VA+LPTV A DD CAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of IVF0012820 vs. ExPASy TrEMBL
Match: A0A6J1FDN7 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111444430 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 83/115 (72.17%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 2   ATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVCM 61
           AT +  AARYIMD+ESMFDLDTVL+GADD+Y       PP VVVADLPTV TDD CAVCM
Sbjct: 8   ATRSAFAARYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVTDDVCAVCM 67

Query: 62  EDFLPDEGGKQIPCGHVYHQSCISSWLSV-GDSCPLCRRHIAPGDKTETSKTVQV 116
           E+F  DEGGKQIPCGHVYHQ+CISSWLSV GD CPLCR H++  +K+ET+K VQV
Sbjct: 68  EEFRADEGGKQIPCGHVYHQTCISSWLSVGGDCCPLCRCHVSSDNKSETAKPVQV 122

[Close]

BLAST of IVF0012820 vs. ExPASy TrEMBL
Match: A0A6J1HNM2 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465331 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.5e-40
Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 0


Query: 2   ATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVA-PPPVVVADLPTVATDDACAVC 61
           AT +  AA YIMD+ESMFDLDTVL+GADD+Y     +  PP VVV+DLPTV TDD CAVC
Sbjct: 8   ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVC 67

Query: 62  MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 116
           ME+F  DEGGKQIPCGHVYHQSCISSWLSVGD CPLCR H++  +K ET+K VQV
Sbjct: 68  MEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTKPVQV 122

[Close]

BLAST of IVF0012820 vs. ExPASy TrEMBL
Match: A0A6J1DM93 (E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC111021870 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 66/109 (60.55%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 3   TSANHAARYIMDIESMFDLDTVLSGADDFYYLH-TAVAPPPVVVADLPTVATDDACAVCM 62
           T+ N AA Y M++  +FDLD VLSG DDF   H TA      +VADLPTV   D CAVC 
Sbjct: 10  TTRNLAAAYPMEL--LFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVA-DVCAVCF 69

Query: 63  EDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETS 111
           EDF  DEGGKQIPCGHVYH+ CISSWL+V D CPLCRR + P     TS
Sbjct: 70  EDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 115

[Close]

BLAST of IVF0012820 vs. NCBI nr
Match: KAA0061529.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (619), Expect = 5.03e-81
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVC 60
           MATSANHAARYIMDIESMFDLDTVLSGADDFYY HTAVAPPPVVVADLPTVATDDACAVC
Sbjct: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVC 60

Query: 61  MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115
           MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV
Sbjct: 61  MEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of IVF0012820 vs. NCBI nr
Match: XP_011650093.1 (E3 ubiquitin-protein ligase RNF115 [Cucumis sativus])

HSP 1 Score: 217 bits (553), Expect = 6.09e-71
Identity = 102/116 (87.93%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVAT-DDACAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYY HT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of IVF0012820 vs. NCBI nr
Match: KAE8651508.1 (hypothetical protein Csa_019333 [Cucumis sativus])

HSP 1 Score: 212 bits (540), Expect = 8.11e-69
Identity = 99/113 (87.61%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVAT-DDACAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYY HT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKT 112
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKT
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT 113

[Close]

BLAST of IVF0012820 vs. NCBI nr
Match: XP_038877426.1 (E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida])

HSP 1 Score: 191 bits (484), Expect = 4.13e-60
Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 3   TSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVCME 62
           T++ +AA YIMDIESMFDLDTVL+GADDFYY  T VAPPPVVVADLPTVA  D CAVC+E
Sbjct: 8   TTSAYAASYIMDIESMFDLDTVLTGADDFYYNKTVVAPPPVVVADLPTVAGKDVCAVCIE 67

Query: 63  DFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115
           DFLPDE GKQIPCGHVYHQSC+SSWLSVGDSCPLCRRHIA  ++ E  KT  V
Sbjct: 68  DFLPDESGKQIPCGHVYHQSCLSSWLSVGDSCPLCRRHIASDEEMEAPKTETV 120

[Close]

BLAST of IVF0012820 vs. NCBI nr
Match: XP_023537996.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (447), Expect = 1.04e-54
Identity = 82/114 (71.93%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 2   ATSANHAARYIMDIESMFDLDTVLSGADDFYYLHTAVAPPPVVVADLPTVATDDACAVCM 61
           AT +  AA YIMD+ESMFDLDTVL+GADD+Y       PP VVVADLPTV TDD CAVCM
Sbjct: 8   ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVTDDVCAVCM 67

Query: 62  EDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115
           E+F  DEGGKQIPCGHVYHQ+CISSWLSVGD CPLCR H++  +K+ET+K VQV
Sbjct: 68  EEFRADEGGKQIPCGHVYHQTCISSWLSVGDCCPLCRCHVSSDNKSETAKPVQV 121

[Close]

BLAST of IVF0012820 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-12
Identity = 30/85 (35.29%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 28  ADDFYYLHTAVAPPPVVVADLPTVATDDA--CAVCMEDFLPDEGGKQIPCGHVYHQSCIS 87
           AD+    H ++     VV +LPTV   ++  C++C++DF      K++PC H +H  CI 
Sbjct: 210 ADNDSIRHGSLPARKEVVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIV 269

Query: 88  SWLSVGDSCPLCRRHIAPGDKTETS 111
            WL +  SCP+CR  + P D+T+ +
Sbjct: 270 PWLELHSSCPVCRYELPPDDETKVN 294

[Close]

BLAST of IVF0012820 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-12
Identity = 30/85 (35.29%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 28  ADDFYYLHTAVAPPPVVVADLPTVATDDA--CAVCMEDFLPDEGGKQIPCGHVYHQSCIS 87
           AD+    H ++     VV +LPTV   ++  C++C++DF      K++PC H +H  CI 
Sbjct: 210 ADNDSIRHGSLPARKEVVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIV 269

Query: 88  SWLSVGDSCPLCRRHIAPGDKTETS 111
            WL +  SCP+CR  + P D+T+ +
Sbjct: 270 PWLELHSSCPVCRYELPPDDETKVN 294

[Close]

BLAST of IVF0012820 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 41  PPVVVADLPTVATDDA-------CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDS 99
           P + ++     +TDD+       CAVC EDF+  E  +++PC H+YH  CI  WLS  +S
Sbjct: 146 PTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNS 205

[Close]

BLAST of IVF0012820 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 48  LPTVATDDA---CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCR 99
           L + ++DD+   CA+C EDF+  E  +++PC H+YH  CI  WL+  +SCPLCR
Sbjct: 84  LSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR 137

[Close]

BLAST of IVF0012820 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11
Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 36  TAVAPPPVVVADLPTVATDDA---CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGD 95
           +A+   P++  D PT    D+   CAVC E+F+     +++PC H+YH  CI  WL++ +
Sbjct: 178 SAIEALPLIEID-PTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 237

Query: 96  SCPLCRRHIAPGDKTE 109
           SCP+CR  +   D T+
Sbjct: 238 SCPVCRHELPAEDLTD 252

The following BLAST results are available for this feature:

BLAST of IVF0012820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y4L5	4.1e-11	36.47	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]
Q9D0C1	1.6e-10	37.35	E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1	[more]
O22283	6.0e-10	36.84	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
P0CH30	6.0e-10	44.83	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q91YL2	7.8e-10	39.51	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]

BLAST of IVF0012820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V793	5.9e-61	99.13	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A0A0LEZ1	2.7e-53	87.93	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 P...	[more]
A0A6J1FDN7	2.6e-40	72.17	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HNM2	7.5e-40	71.30	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1DM93	2.1e-26	60.55	E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of IVF0012820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061529.1	5.03e-81	99.13	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]
XP_011650093.1	6.09e-71	87.93	E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]	[more]
KAE8651508.1	8.11e-69	87.61	hypothetical protein Csa_019333 [Cucumis sativus]	[more]
XP_038877426.1	4.13e-60	78.76	E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]	[more]
XP_023537996.1	1.04e-54	71.93	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0012820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26400.2	8.6e-12	35.29	RING/U-box superfamily protein	[more]
AT4G26400.1	8.6e-12	35.29	RING/U-box superfamily protein	[more]
AT3G60080.1	1.9e-11	43.08	RING/U-box superfamily protein	[more]
AT2G44330.1	3.3e-11	46.30	RING/U-box superfamily protein	[more]
AT2G39720.1	4.3e-11	36.84	RING-H2 finger C2A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 57..97 e-value: 1.8E-8 score: 44.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 56..98 e-value: 2.2E-12 score: 47.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 57..98 score: 12.902362
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 48..114 e-value: 3.0E-19 score: 70.0
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 15..101
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 15..101
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 51..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012820.2	IVF0012820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding