IVF0012423 (gene) Melon (IVF77) v1

Overview


Name	IVF0012423
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription factor IBH1
Location	chr05: 21813122 .. 21813944 (-)
RNA-Seq Expression	IVF0012423
Synteny	IVF0012423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTCATTTTCCTCTCTTTTCTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCAATTTTTCCTCTACTATTTTTCTTTTGATCTTTAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAAATTACGTACTTAATTACTTTTGTAATTTTTTTTTTCTAAAGGGCTTGTTAGGGAGAAATATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTTTTTTTATATATACATACATGTAAGTGAATTTGATGTTTTAATTTTA

mRNA sequence

TCATTCATTTTCCTCTCTTTTCTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCAATTTTTCCTCTACTATTTTTCTTTTGATCTTTAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAAATTACGTACTTAATTACTTTTGTAATTTTTTTTTTCTAAAGGGCTTGTTAGGGAGAAATATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTTTTTTTATATATACATACATGTAAGTGAATTTGATGTTTTAATTTTA

Coding sequence (CDS)

ATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGA

Protein sequence

MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK

Homology

[Close]

BLAST of IVF0012423 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.0e-22
Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           M   + + ++FLK W +GLQ    S  N +  +RKKAIK+SAD AMA+ R GTT WS+++
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPEAILNRR-------TSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPL 120
           I K+    A  +  L R+        + IN    K+T+   RK+ R+  + + R+S+   
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTVCH-RKIVRRSKKILRRKSKSAS 120

Query: 121 SKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLAN 173
            +A  +  AKRLV++RT+ LR+++PGGE M ++ LL++E LDYI  LQ QV+ MR + +
Sbjct: 121 EEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120
           IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120

Query: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 176
           IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPN NKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120
           IAK LKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120

Query: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 176
           IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 161/177 (90.96%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTT-SSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQS 60
           MPNPNKLKQQFLK WLVGL+STT SSTTNMNFLDRKKAIKISADYAMA TR GTTIWSQS
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120
           IIAKSLKGHAPP+AILNR T YINLLRKKRTMTQL+KMGRKIGR+MARRSRLP SK LP 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKKRTMTQLQKMGRKIGRRMARRSRLPSSKVLPR 120

Query: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLAN-YCK 176
           TIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLAN YCK
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYCK 177

[Close]

BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45
Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNPNKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSR-LPLSKA 120
           IAKS+K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQ-TKGRRRVGRRATRRSNFFPPSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 176
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 177

[Close]

BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A6J1FC37 (transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444263 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.8e-43
Identity = 106/176 (60.23%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNP  LKQ F+K W++GL   T S TNMNFL+RK AIK ++D AMAATRNG T WS++I
Sbjct: 1   MPNPINLKQIFIKKWIMGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMAR-RSRLPLSKALPS 120
           IAKS++  APPEA L R+T                 M RKI RK+AR R+ L  S+++  
Sbjct: 61  IAKSIQ--APPEAKLRRKT-----------------MLRKIARKVARSRTHLSRSRSVAR 120

Query: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 176
           ++AKRLV KRTK+LRSL+PGGEFMKDEALLI+EALDYI FL+ QVDGMRFLA+ CK
Sbjct: 121 SVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK 156

[Close]

BLAST of IVF0012423 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (868), Expect = 4.81e-117
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120
           IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120

Query: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175
           IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of IVF0012423 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 332 bits (852), Expect = 1.32e-114
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPN NKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120
           IAK LKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120

Query: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175
           IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of IVF0012423 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 303 bits (776), Expect = 5.47e-103
Identity = 161/177 (90.96%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSS-TTNMNFLDRKKAIKISADYAMAATRNGTTIWSQS 60
           MPNPNKLKQQFLK WLVGL+STTSS TTNMNFLDRKKAIKISADYAMA TR GTTIWSQS
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120
           IIAKSLKGHAPP+AILNR T YINLLRKKRTMTQL+KMGRKIGR+MARRSRLP SK LP 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKKRTMTQLQKMGRKIGRRMARRSRLPSSKVLPR 120

Query: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANY-CK 175
           TIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLANY CK
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYCK 177

[Close]

BLAST of IVF0012423 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 264 bits (675), Expect = 1.21e-87
Identity = 139/175 (79.43%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNPNKLKQQFLK WLVGL+STTSS TNMN L+RKKAIK+SADYAMAATRNG+TIWS++I
Sbjct: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPST 120
           IAKS+KG AP EAI NR+T Y  L RKK T T L KMGR++GRK+AR SR P  KAL  T
Sbjct: 61  IAKSIKGQAPLEAISNRQTIYAKLQRKKMTTTTLWKMGRRVGRKVAR-SRSPPWKALART 120

Query: 121 IAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175
           +AKRLVEKRTKVLRSL+PGGEFM+DE LLIEEALDYI FLQAQVDGMRFLANYCK
Sbjct: 121 VAKRLVEKRTKVLRSLVPGGEFMEDEVLLIEEALDYITFLQAQVDGMRFLANYCK 174

[Close]

BLAST of IVF0012423 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 195 bits (495), Expect = 7.96e-60
Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           MPNPNKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSRL-PLSKA 120
           IAKS+K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQT-KGRRRVGRRATRRSNFFPPSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 177

[Close]

BLAST of IVF0012423 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23
Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           M   + + ++FLK W +GLQ    S  N +  +RKKAIK+SAD AMA+ R GTT WS+++
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPEAILNRR-------TSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPL 120
           I K+    A  +  L R+        + IN    K+T+   RK+ R+  + + R+S+   
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTVCH-RKIVRRSKKILRRKSKSAS 120

Query: 121 SKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLAN 173
            +A  +  AKRLV++RT+ LR+++PGGE M ++ LL++E LDYI  LQ QV+ MR + +
Sbjct: 121 EEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of IVF0012423 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23
Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60
           M   + + ++FLK W +GLQ    S  N +  +RKKAIK+SAD AMA+ R GTT WS+++
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPEAILNRR-------TSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPL 120
           I K+    A  +  L R+        + IN    K+T+   RK+ R+  + + R+S+   
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTVCH-RKIVRRSKKILRRKSKSAS 120

Query: 121 SKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLAN 173
            +A  +  AKRLV++RT+ LR+++PGGE M ++ LL++E LDYI  LQ QV+ MR + +
Sbjct: 121 EEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of IVF0012423 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 5   NKLKQQFLKNWLVGLQSTTSSTTN-MNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAK 64
           N +KQ+F+K W+  L    SS  + +N  +RK AI++S+D AMAA RNG+T+WS+++I++
Sbjct: 6   NMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRALISR 65

Query: 65  SLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARR--SRLPLSKALPSTI 124
           S                           T  + M R+I +K   R  +R  + +   +  
Sbjct: 66  S------------------------GNKTANKPMARRILKKARNRMKNRCNILRRNGNFT 125

Query: 125 AKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLA 172
           AK  V KRT +L+SL+PGGE + D+  LI E LDYI +L+AQVD MR +A
Sbjct: 126 AKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of IVF0012423 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 17  VGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAKSLKGHAPPEAILN 76
           V L S+ S++++     R KA++ +AD A+A +  G T+WS++I+A  +K       +  
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK-------LKF 127

Query: 77  RRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLS-KALPSTIAKRLVEKRTKVLRS 136
           R+            MT +        RK  R S L L+ K++P       V ++ +VL  
Sbjct: 128 RKQRRPRATMAIPAMTTVVSSSSNRSRK-RRVSVLRLNKKSIPD------VNRKVRVLGR 187

Query: 137 LIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFL 171
           L+PG    +   +++EEA DYI  L+ QV  M  L
Sbjct: 188 LVPGCG-KQSVPVILEEATDYIQALEMQVRAMNSL 207

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BLAST of IVF0012423 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 17  VGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAKSLKGHAPPEAILN 76
           V L S+ S++++     R KA++ +AD A+A +  G T+WS++I+A  +K       +  
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK-------LKF 127

Query: 77  RRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLS-KALPSTIAKRLVEKRTKVLRS 136
           R+            MT +        RK  R S L L+ K++P       V ++ +VL  
Sbjct: 128 RKQRRPRATMAIPAMTTVVSSSSNRSRK-RRVSVLRLNKKSIPD------VNRKVRVLGR 187

Query: 137 LIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFL 171
           L+PG    +   +++EEA DYI  L+ QV  M  L
Sbjct: 188 LVPGCG-KQSVPVILEEATDYIQALEMQVRAMNSL 207

The following BLAST results are available for this feature:

BLAST of IVF0012423 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	8.0e-22	39.11	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]

BLAST of IVF0012423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK75	4.6e-89	100.00	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BT01	3.3e-87	98.86	uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=...	[more]
A0A0A0LM92	2.1e-78	90.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1	[more]
A0A6J1DKD7	1.4e-45	61.45	transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ...	[more]
A0A6J1FC37	3.8e-43	60.23	transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444263 P...	[more]

BLAST of IVF0012423 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048635.1	4.81e-117	100.00	transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f...	[more]
XP_008452339.1	1.32e-114	98.86	PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]	[more]
XP_004149100.1	5.47e-103	90.96	transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot...	[more]
XP_038890559.1	1.21e-87	79.43	transcription factor IBH1-like 1 [Benincasa hispida]	[more]
XP_022153351.1	7.96e-60	61.45	transcription factor IBH1-like 1 [Momordica charantia]	[more]

BLAST of IVF0012423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	5.6e-23	39.11	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	5.6e-23	39.11	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	1.5e-20	37.65	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT3G06590.1	1.2e-04	29.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	1.2e-04	29.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..172
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..172
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 119..171 e-value: 3.07584E-12 score: 56.862
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 128..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012423.2	IVF0012423.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding