IVF0012423 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATTCATTTTCCTCTCTTTTCTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCAATTTTTCCTCTACTATTTTTCTTTTGATCTTTAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAAATTACGTACTTAATTACTTTTGTAATTTTTTTTTTCTAAAGGGCTTGTTAGGGAGAAATATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTTTTTTTATATATACATACATGTAAGTGAATTTGATGTTTTAATTTTA TCATTCATTTTCCTCTCTTTTCTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCAATTTTTCCTCTACTATTTTTCTTTTGATCTTTAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAAATTACGTACTTAATTACTTTTGTAATTTTTTTTTTCTAAAGGGCTTGTTAGGGAGAAATATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTTTTTTTATATATACATACATGTAAGTGAATTTGATGTTTTAATTTTA ATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAATTGGTTGGTAGGTCTACAATCAACCACTTCTTCAACCACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCAATCCATCATCGCCAAATCCCTTAAAGGTCATGCTCCACCCGAGGCCATATTGAATCGTCGAACGAGTTACATAAATCTTCTAAGGAAGAAGAGGACGATGACACAACTGCGGAAGATGGGTCGGAAAATCGGCCGAAAAATGGCGAGGAGGAGCCGCTTGCCTCTGTCAAAGGCGTTACCAAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGAAGGATGAAGCTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGA MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSIIAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGRKIGRKMARRSRLPLSKALPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK Homology
BLAST of IVF0012423 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.0e-22 Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87 Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0
BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78 Identity = 161/177 (90.96%), Postives = 166/177 (93.79%), Query Frame = 0
BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45 Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of IVF0012423 vs. ExPASy TrEMBL
Match: A0A6J1FC37 (transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444263 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.8e-43 Identity = 106/176 (60.23%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of IVF0012423 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa]) HSP 1 Score: 338 bits (868), Expect = 4.81e-117 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of IVF0012423 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]) HSP 1 Score: 332 bits (852), Expect = 1.32e-114 Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0
BLAST of IVF0012423 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus]) HSP 1 Score: 303 bits (776), Expect = 5.47e-103 Identity = 161/177 (90.96%), Postives = 166/177 (93.79%), Query Frame = 0
BLAST of IVF0012423 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida]) HSP 1 Score: 264 bits (675), Expect = 1.21e-87 Identity = 139/175 (79.43%), Postives = 153/175 (87.43%), Query Frame = 0
BLAST of IVF0012423 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia]) HSP 1 Score: 195 bits (495), Expect = 7.96e-60 Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of IVF0012423 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23 Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of IVF0012423 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 105.1 bits (261), Expect = 5.6e-23 Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of IVF0012423 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 0
BLAST of IVF0012423 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04 Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of IVF0012423 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04 Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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