IVF0012388 (gene) Melon (IVF77) v1

Overview


Name	IVF0012388
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Hydroxymethylbilane hydrolyase [cyclizing]
Location	chr02: 12365508 .. 12366511 (+)
RNA-Seq Expression	IVF0012388
Synteny	IVF0012388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGACATAAAGTTATGAAAAGTTTTAAAAAGTTTAAGAAGGAGGAGAAGAAAAAGAGTGTGAACTCCAAAGAAATCACAAATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACATCAGTCCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTCCTCTCCGCGTACGGTGGCCTTCACGACGCCTCAAAACTATGCCGGCAGCCTCTCTCACCTCCTCTCGCTCAAAGGCTTCGAACCCCTCTGGTGTCCCACTCTTACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACTTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCGCACGGCGATACTTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCCTAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTTGAAGCTCTTGGAGTTGGAAACCACCGTCGGGTTTTATGTCCGGTTCCTCGCGTCGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTCCGCGTTGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGAAAGCTGGTGGAGAGAGGGAAGGATGAGAAATTGGATGCCATTGTGTTTACAAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGAGCATTTGGGTTTGGAGTGGGATATAATGAAAAAGAGATGGCCGGAAATGGTGGTGGCTGCGCATGGGCCCGTGACAGCGGCAGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTCCTAAGTTTGATAGCTTCAATGGTGTGGTTGATTCTCTTCATTGGAGATGGCAGAGCTTAGATTAG

mRNA sequence

CTGACATAAAGTTATGAAAAGTTTTAAAAAGTTTAAGAAGGAGGAGAAGAAAAAGAGTGTGAACTCCAAAGAAATCACAAATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACATCAGTCCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTCCTCTCCGCGTACGGTGGCCTTCACGACGCCTCAAAACTATGCCGGCAGCCTCTCTCACCTCCTCTCGCTCAAAGGCTTCGAACCCCTCTGGTGTCCCACTCTTACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACTTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCGCACGGCGATACTTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCCTAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTTGAAGCTCTTGGAGTTGGAAACCACCGTCGGGTTTTATGTCCGGTTCCTCGCGTCGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTCCGCGTTGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGAAAGCTGGTGGAGAGAGGGAAGGATGAGAAATTGGATGCCATTGTGTTTACAAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGAGCATTTGGGTTTGGAGTGGGATATAATGAAAAAGAGATGGCCGGAAATGGTGGTGGCTGCGCATGGGCCCGTGACAGCGGCAGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTCCTAAGTTTGATAGCTTCAATGGTGTGGTTGATTCTCTTCATTGGAGATGGCAGAGCTTAGATTAG

Coding sequence (CDS)

ATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACATCAGTCCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTCCTCTCCGCGTACGGTGGCCTTCACGACGCCTCAAAACTATGCCGGCAGCCTCTCTCACCTCCTCTCGCTCAAAGGCTTCGAACCCCTCTGGTGTCCCACTCTTACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACTTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCGCACGGCGATACTTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCCTAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTTGAAGCTCTTGGAGTTGGAAACCACCGTCGGGTTTTATGTCCGGTTCCTCGCGTCGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTCCGCGTTGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGAAAGCTGGTGGAGAGAGGGAAGGATGAGAAATTGGATGCCATTGTGTTTACAAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGAGCATTTGGGTTTGGAGTGGGATATAATGAAAAAGAGATGGCCGGAAATGGTGGTGGCTGCGCATGGGCCCGTGACAGCGGCAGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTCCTAAGTTTGATAGCTTCAATGGTGTGGTTGATTCTCTTCATTGGAGATGGCAGAGCTTAGATTAG

Protein sequence

MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWCPTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIAALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLNEPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEGLLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLHWRWQSLD

Homology

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BLAST of IVF0012388 vs. ExPASy Swiss-Prot
Match: Q8KCJ3 (Uroporphyrinogen-III synthase OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=hemD PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.1e-05
Identity = 56/263 (21.29%), Postives = 107/263 (40.68%), Query Frame = 0


Query: 32  RTVAFTTPQNYAGSLSHLLSLKGFEPLWCPTLTVQPTPLAIKSHLLPPILHSFSAVAFTS 91
           +TV  T P++ A      L+  G + +  PT+ ++P      +    P L  F+ + FTS
Sbjct: 2   KTVLVTRPKHQAEPFVRELAQYGLDSVVFPTIEIRPV-----TGWSVPDLTRFAGIFFTS 61

Query: 92  RSGITALLDAATEIGEPLLPSHGDTFLIAALGKDSELLDHEFLTTICPNTSRIRVVVPEI 151
            + +   L+   E     LP+      + A+GK +     +   +I P        +P+ 
Sbjct: 62  PNSVQFFLERLLEESPDELPNLQQA-RVWAVGKTTGGDLEKHGVSIEP--------LPKS 121

Query: 152 ATPTGLVEALGVGN-HRRVLCPVPRVVGLNEPPVVPNFLRDLEAKGWVPVRVDAYETRWA 211
           A    L+  +       +    V   + L   P V      +  +G + V +  Y+    
Sbjct: 122 ADAVSLMSGIDASEIEGKTFLFVRGSLSLGTIPEV------IAKRGGICVELTVYDNIQP 181

Query: 212 GPDCARKLVERGKDEKLDAIVFTSTGEVEGLLKSLEHLGLEWDIMKKRWPEMVVAAHGPV 271
             +  +K+     + K+D + FTS        ++++   +  D++        +AA G  
Sbjct: 182 SLEETQKIKSLLTEGKIDCLSFTSPSTAINFFEAIDSKEVPSDVL--------IAAIGTT 236

Query: 272 TAAGAERLGVKVDLVSPKFDSFN 294
           T++  E+LGVKVD++   FD  N
Sbjct: 242 TSSALEKLGVKVDIIPEYFDGPN 236

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BLAST of IVF0012388 vs. ExPASy TrEMBL
Match: A0A5D3BX13 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00630 PE=3 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 1.3e-176
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH
Sbjct: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQSLD 308
           WRWQSLD
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of IVF0012388 vs. ExPASy TrEMBL
Match: A0A5A7U8V3 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00050 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.0e-176
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSLEHLGLEWD+MKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQSLD 308
           WRWQSLD
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of IVF0012388 vs. ExPASy TrEMBL
Match: A0A1S3BA78 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo OX=3656 GN=LOC103487492 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.0e-176
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSLEHLGLEWD+MKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQSLD 308
           WRWQSLD
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of IVF0012388 vs. ExPASy TrEMBL
Match: A0A0A0LZ08 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis sativus OX=3659 GN=Csa_1G266180 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.0e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQSLD 308
           WRWQ+L+
Sbjct: 301 WRWQNLE 307

[Close]

BLAST of IVF0012388 vs. ExPASy TrEMBL
Match: A0A6J1KXQ2 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111497286 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.2e-146
Identity = 258/307 (84.04%), Postives = 283/307 (92.18%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHP+   H++PL SSPSPAIPT+S  RTVAFTTPQNYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPS-LIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI +PLL   GDTFLIA
Sbjct: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  CPNTSRIRVVVP+IATP+GLVEALG+GNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRWAGP+CAR LV+RG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSL  LGL+W++M+K+WPEMV+AAHGPVTAAGAERLGVK+DLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQSLD 308
            RWQSL+
Sbjct: 301 SRWQSLE 306

[Close]

BLAST of IVF0012388 vs. NCBI nr
Match: TYK03635.1 (Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. makuwa])

HSP 1 Score: 629 bits (1621), Expect = 1.95e-227
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH
Sbjct: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQSLD 307
           WRWQSLD
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of IVF0012388 vs. NCBI nr
Match: XP_008444040.1 (PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo] >KAA0050031.1 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. makuwa])

HSP 1 Score: 627 bits (1618), Expect = 5.59e-227
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSLEHLGLEWD+MKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQSLD 307
           WRWQSLD
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of IVF0012388 vs. NCBI nr
Match: XP_011648476.1 (uncharacterized protein LOC105434481 [Cucumis sativus] >KGN65221.1 hypothetical protein Csa_019699 [Cucumis sativus])

HSP 1 Score: 601 bits (1549), Expect = 1.85e-216
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQSLD 307
           WRWQ+L+
Sbjct: 301 WRWQNLE 307

[Close]

BLAST of IVF0012388 vs. NCBI nr
Match: XP_038878808.1 (uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878810.1 uncharacterized protein LOC120070948 [Benincasa hispida])

HSP 1 Score: 567 bits (1462), Expect = 3.33e-199
Identity = 276/307 (89.90%), Postives = 290/307 (94.46%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPN P H++PL+ SPS AIPTHS+ RTVAFTTPQNYA SLSHLLSLK FEPLWC
Sbjct: 1   MSTGAAHPNRPIHLNPLSLSPSAAIPTHSTRRTVAFTTPQNYADSLSHLLSLKSFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTV PTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPS GDTFLIA
Sbjct: 61  PTLTVHPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSRGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH FL+  CPNTSRIRVVVPEIATPTGLVEALG+GN RRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGFLSRFCPNTSRIRVVVPEIATPTGLVEALGIGNQRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLE KGWVPVRV AYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLETKGWVPVRVAAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSL HLGL+W++M+KRWPEMVVAA+GPVTAAGAERLG+KVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLGHLGLKWEVMRKRWPEMVVAANGPVTAAGAERLGIKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQSLD 307
           WRWQSL+
Sbjct: 301 WRWQSLE 307

[Close]

BLAST of IVF0012388 vs. NCBI nr
Match: KAG6587847.1 (hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035661.1 hypothetical protein SDJN02_02459, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528 bits (1361), Expect = 9.58e-188
Identity = 257/307 (83.71%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHP+   H++PL SSPSPAIPT+S  RTVAFTTPQNYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPSPIHHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI EPLL   GDTFLIA
Sbjct: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDEPLLSPQGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  CPN SRIRVVVP+IA+P+GLVEALG+GNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGVLSKFCPNASRIRVVVPKIASPSGLVEALGIGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRW GP+CARKL ERG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWVGPECARKLAERGEDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300
           LLKSL  LGL+W++M+K+WPEMV+AAHGPVTAAGAERLGVK+DLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLRALGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQSLD 307
            RWQSL+
Sbjct: 301 SRWQSLE 307

The following BLAST results are available for this feature:

BLAST of IVF0012388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8KCJ3	9.1e-05	21.29	Uroporphyrinogen-III synthase OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM ...	[more]

BLAST of IVF0012388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BX13	1.3e-176	100.00	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7U8V3	3.0e-176	99.67	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BA78	3.0e-176	99.67	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo OX=3656 GN=LOC1034874...	[more]
A0A0A0LZ08	3.0e-168	95.11	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis sativus OX=3659 GN=Csa_1G2...	[more]
A0A6J1KXQ2	7.2e-146	84.04	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of IVF0012388 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03635.1	1.95e-227	100.00	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. maku...	[more]
XP_008444040.1	5.59e-227	99.67	PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo] >KAA0050031.1 Tet...	[more]
XP_011648476.1	1.85e-216	95.11	uncharacterized protein LOC105434481 [Cucumis sativus] >KGN65221.1 hypothetical ...	[more]
XP_038878808.1	3.33e-199	89.90	uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 unchara...	[more]
KAG6587847.1	9.58e-188	83.71	hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0012388 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	PFAM	PF02602	HEM4	coord: 46..293 e-value: 2.8E-26 score: 92.3
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	CDD	cd06578	HemD	coord: 34..299 e-value: 1.07473E-26 score: 103.156
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	GENE3D	3.40.50.10090		coord: 185..303 e-value: 3.6E-14 score: 54.6 coord: 28..163 e-value: 3.4E-6 score: 28.8
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	SUPERFAMILY	69618	HemD-like	coord: 32..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR38020	UROPORPHYRINOGEN-III SYNTHASE	coord: 17..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012388.2	IVF0012388.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0033014	tetrapyrrole biosynthetic process
molecular_function	GO:0004852	uroporphyrinogen-III synthase activity