IVF0012360 (gene) Melon (IVF77) v1

Overview
NameIVF0012360
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease MC-like
Locationchr04: 26687152 .. 26688005 (+)
RNA-Seq ExpressionIVF0012360
SyntenyIVF0012360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAATTAATAATGGCGGTAGCAATGGCAAGGGGAAGGAGAGAAATTATGTTATTGTTCGTGGTTACCTTAAGCATCAGCTTGTTTCCTACTATGAAATCACAAATATTTGATGACTTCTACTTTGTTCAACAATGGCCACCAGCAGTTTGCGCTGGACGTTCAGGACAATGTGTAGGACAAGGGTTTCGGTACTTTACAATTCATGGTGTGTGGCCTCAGAAAGGAGGACAATCTATAGTTAATTGCCCTGGCACTAAATTTGACGTCAATCAGGTATTGATCTATTTTATAATTGTCAAACCCACTCTCTAAATACATATTTTATGCCCTAAACGACTCTTTTTAACATTACGTGGGAGTGAGTTTCAGATTTCGAGTTTAACAAACACTCTACATCAAACGTGGCCGGATGTGATAAACGGAAAAGACCAAACTTTTTGGGAACACGAGTGGAACAAACATGGAACTTGCTCAGAAAGCAAGTACCAAATGCTACCATACTTCCAAATGGCGATAAATATGAAGTACAAAATCGACGTTCTTGGTGCCATGAGGGTAGGTGGGGTAGTCCCAAACAACCACAAGAAGGCCAAACAAAGAGTAGAGGTGGTAATCTTCAATGCATATCACGCATATCCTCTTCTTCGATGTAAAAAAGATTCAACCGGCCAATACCTATTGACGGAGGTTGTTATGTGCTTTAAGGATGATGGTGTCACCCTTCTAAACTGCACTCGATCAAAATCCACTTGTGGTGCAGACTTTCTCTTTTGATAACGTATGTGTTTAATTCTCATGCATGCCAATAATAATGTTATTACTTAATAATGTATGCATGTGCTTAATTCCCC

mRNA sequence

GTTTAATTAATAATGGCGGTAGCAATGGCAAGGGGAAGGAGAGAAATTATGTTATTGTTCGTGGTTACCTTAAGCATCAGCTTGTTTCCTACTATGAAATCACAAATATTTGATGACTTCTACTTTGTTCAACAATGGCCACCAGCAGTTTGCGCTGGACGTTCAGGACAATGTGTAGGACAAGGGTTTCGGTACTTTACAATTCATGGTGTGTGGCCTCAGAAAGGAGGACAATCTATAGTTAATTGCCCTGGCACTAAATTTGACGTCAATCAGATTTCGAGTTTAACAAACACTCTACATCAAACGTGGCCGGATGTGATAAACGGAAAAGACCAAACTTTTTGGGAACACGAGTGGAACAAACATGGAACTTGCTCAGAAAGCAAGTACCAAATGCTACCATACTTCCAAATGGCGATAAATATGAAGTACAAAATCGACGTTCTTGGTGCCATGAGGGTAGGTGGGGTAGTCCCAAACAACCACAAGAAGGCCAAACAAAGAGTAGAGGTGGTAATCTTCAATGCATATCACGCATATCCTCTTCTTCGATGTAAAAAAGATTCAACCGGCCAATACCTATTGACGGAGGTTGTTATGTGCTTTAAGGATGATGGTGTCACCCTTCTAAACTGCACTCGATCAAAATCCACTTGTGGTGCAGACTTTCTCTTTTGATAACGTATGTGTTTAATTCTCATGCATGCCAATAATAATGTTATTACTTAATAATGTATGCATGTGCTTAATTCCCC

Coding sequence (CDS)

ATGGCGGTAGCAATGGCAAGGGGAAGGAGAGAAATTATGTTATTGTTCGTGGTTACCTTAAGCATCAGCTTGTTTCCTACTATGAAATCACAAATATTTGATGACTTCTACTTTGTTCAACAATGGCCACCAGCAGTTTGCGCTGGACGTTCAGGACAATGTGTAGGACAAGGGTTTCGGTACTTTACAATTCATGGTGTGTGGCCTCAGAAAGGAGGACAATCTATAGTTAATTGCCCTGGCACTAAATTTGACGTCAATCAGATTTCGAGTTTAACAAACACTCTACATCAAACGTGGCCGGATGTGATAAACGGAAAAGACCAAACTTTTTGGGAACACGAGTGGAACAAACATGGAACTTGCTCAGAAAGCAAGTACCAAATGCTACCATACTTCCAAATGGCGATAAATATGAAGTACAAAATCGACGTTCTTGGTGCCATGAGGGTAGGTGGGGTAGTCCCAAACAACCACAAGAAGGCCAAACAAAGAGTAGAGGTGGTAATCTTCAATGCATATCACGCATATCCTCTTCTTCGATGTAAAAAAGATTCAACCGGCCAATACCTATTGACGGAGGTTGTTATGTGCTTTAAGGATGATGGTGTCACCCTTCTAAACTGCACTCGATCAAAATCCACTTGTGGTGCAGACTTTCTCTTTTGA

Protein sequence

MAVAMARGRREIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKGGQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLLTEVVMCFKDDGVTLLNCTRSKSTCGADFLF
Homology
BLAST of IVF0012360 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51
Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 0

Query: 33  FDDFYFVQQWPPAVCA-GRSGQCVGQGFRYFTIHGVWPQKGGQSIVNCP-GTKFDVNQIS 92
           FD F+FVQQWPPAVC+  +SG C G G R FTIHG+WPQ  G S+ NCP G+ FD+ +IS
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 93  SLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPYFQMAINMKYKIDVLGAMR 152
            L + L+  WP+V+   +Q FW HEW KHGTCSES +    YF++A++M+   D++GA+R
Sbjct: 61  HLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALR 120

Query: 153 VGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKD-STGQYLLTEVVMCFKDDGVTLLNC 212
                PN   K++Q ++  +   +  +P LRC+ D  T    L +VV CF  DG TL++C
Sbjct: 121 PHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 180

Query: 213 TRSKSTCGADFLF 223
           TR   TCGA+F+F
Sbjct: 181 TR--DTCGANFIF 191

BLAST of IVF0012360 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 76/218 (34.86%), Postives = 112/218 (51.38%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCV---GQGFRYFTIHGVWP 72
           ++  +V L      +  S+ FD FYFVQQWP + C  +   C    G+    F IHG+WP
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP 69

Query: 73  Q-KGGQSIVNCPGTK-FDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNKHGTCSES 132
             K G    NC  +K FD + IS L  ++ ++WP +   +G  + FWEHEW KHGTCSES
Sbjct: 70  NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSES 129

Query: 133 KYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKD 192
                 YFQ A+N+K K ++LGA+   G+ P+    + + +   I  +    P + C +D
Sbjct: 130 VIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD 189

Query: 193 STGQYLLTEVVMCFKDDGVTLLNC-TRSKSTCGADFLF 223
            +G   L +V +C    G  L+ C       CGA+  F
Sbjct: 190 GSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEF 227

BLAST of IVF0012360 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-28
Identity = 69/205 (33.66%), Postives = 107/205 (52.20%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQC---VGQGFRYFTIHGVWP 72
           ++L ++T  +S+    K   FD FYFVQQWP + C  +   C    G+    F IHG+WP
Sbjct: 11  LILLIITQCLSVLNAAKD--FDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWP 70

Query: 73  QKG-GQSIVNC-PGTKFDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNKHGTCSES 132
               G    NC P + +D +QIS L +++ Q WP +   +G   TFW HEW KHGTC+ES
Sbjct: 71  NNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAES 130

Query: 133 KY-QMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKK 192
                  YF+ A+++K +ID+L  ++   + P+        +   I +A    P ++C  
Sbjct: 131 VLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNV 190

Query: 193 DSTGQYLLTEVVMCFKDDGVTLLNC 210
           D +G   L +V +C    G +L+ C
Sbjct: 191 DQSGNSQLYQVYICVDGSGSSLIEC 213

BLAST of IVF0012360 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 68/205 (33.17%), Postives = 102/205 (49.76%), Query Frame = 0

Query: 13  MLLFVVTLSI-SLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQC---VGQGFRYFTIHGVW 72
           M  F+  L++  L+    +Q FD FYFV QWP A C  R   C    G+    F IHG+W
Sbjct: 1   MKFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLW 60

Query: 73  PQ-KGGQSIVNC-PGTKFDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNKHGTCSE 132
           P  K G    NC P ++FD  ++S L + L + WP +   +     FW HEW KHGTC+E
Sbjct: 61  PNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAE 120

Query: 133 SKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKK 192
           S+     YF+  + +K K ++L A+   G+ P++     + +E  I       P + C K
Sbjct: 121 SELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 193 DSTGQYLLTEVVMCFKDDGVTLLNC 210
           DS+    L ++ +C        +NC
Sbjct: 181 DSSHNSQLYQIYLCVDTSASKFINC 205

BLAST of IVF0012360 vs. ExPASy Swiss-Prot
Match: P83618 (Ribonuclease-like storage protein OS=Panax ginseng OX=4054 PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-26
Identity = 62/212 (29.25%), Postives = 99/212 (46.70%), Query Frame = 0

Query: 10  REIMLLFVVTLSISLFP----TMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIH 69
           R I ++ V+ +S+S+F           +  F    QWP   C   +          FTIH
Sbjct: 2   RAIYIISVIIVSLSIFSWGGNARSDYPWAMFALRLQWPAGFCEVNNACDTKSLLNTFTIH 61

Query: 70  GVWPQKG-GQSIVNCPGTKFDVNQISSLTNTLHQTWPD-VINGKDQTFWEHEWNKHGTCS 129
           G++P    G   + C GT FDVN +S     +H  WP    N +D  FWEHEW KHG CS
Sbjct: 62  GLYPYNAKGTPALYCDGTAFDVNSVSDFLAEMHLAWPSHETNTEDIQFWEHEWKKHGRCS 121

Query: 130 ESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCK 189
           E+  +   YF+ A+  +   D++G +   G+ PNN     + ++  I    +A P +   
Sbjct: 122 EALLKQTDYFRTALAFRKAFDIVGLLNQEGIYPNNDLYRPKMIKEAIKKHLNAVPEIDFT 181

Query: 190 KDSTGQYLLTEVVMCFKDDGVTLLNCTRSKST 216
           K+   +Y+LT++ +C        ++C    +T
Sbjct: 182 KNENSEYVLTDINVCVNQQATRFVDCPTDDAT 213

BLAST of IVF0012360 vs. ExPASy TrEMBL
Match: A0A5A7UJ53 (Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007970 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.6e-123
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 72
           MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG
Sbjct: 1   MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 60

Query: 73  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 132
           GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY
Sbjct: 61  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 120

Query: 133 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 192
           FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL
Sbjct: 121 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 180

Query: 193 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 223
           TEVVMCFKDDGVTLLNCTRSKSTCGADFLF
Sbjct: 181 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 210

BLAST of IVF0012360 vs. ExPASy TrEMBL
Match: A0A5D3DQ69 (Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007950 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 72
           MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG
Sbjct: 1   MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 60

Query: 73  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 132
           GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESK+QMLPY
Sbjct: 61  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKFQMLPY 120

Query: 133 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 192
           FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL
Sbjct: 121 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 180

Query: 193 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 223
           TEVVMCFKDDGVTLLNCTRSKSTCGADFLF
Sbjct: 181 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 210

BLAST of IVF0012360 vs. ExPASy TrEMBL
Match: A0A0A0LHQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825060 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93
Identity = 165/221 (74.66%), Postives = 184/221 (83.26%), Query Frame = 0

Query: 5   MARGRR---EIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRY 64
           MA GRR    I+LLFVVTLSISLFP MKSQ FD FYFVQQWPPAVC GR+G+CVG+G  Y
Sbjct: 1   MAGGRRSDINIVLLFVVTLSISLFPIMKSQQFDKFYFVQQWPPAVCDGRTGKCVGKGMYY 60

Query: 65  FTIHGVWPQKGGQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGT 124
           FTIHGVWPQKGG+S++NCPGT+FD N+ISSL NTLHQ   DVIN  DQ  W HEWNKHG 
Sbjct: 61  FTIHGVWPQKGGKSVINCPGTQFDFNKISSLANTLHQIMKDVINADDQFLWSHEWNKHGV 120

Query: 125 CSESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLR 184
           CSES+Y M  YFQMAINMKYKI+VL A+R+GG+ PNNH KAKQRVE  +F AY+AYPLLR
Sbjct: 121 CSESRYSMKQYFQMAINMKYKINVLSALRMGGITPNNHLKAKQRVEGAMFTAYNAYPLLR 180

Query: 185 CKKDSTGQYLLTEVVMCFKDDGVTLLNCTRSKSTCGADFLF 223
           CKKDS+GQ LLTEVVMCF +DGVTLLNCT +KS C AD LF
Sbjct: 181 CKKDSSGQSLLTEVVMCFDNDGVTLLNCTTTKSNCDADVLF 221

BLAST of IVF0012360 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-70
Identity = 123/210 (58.57%), Postives = 156/210 (74.29%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 72
           ++ FV  L+I LFP +KSQ FDDF+FVQQWPPAVC  +SG+CVG+G R FTIHG+WPQKG
Sbjct: 9   VVFFVFVLTI-LFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKG 68

Query: 73  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 132
           G+S+ NC G +FD  +I+ L N L+  WP+V+ G ++ FW HEWNKHG CSESK+    Y
Sbjct: 69  GRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKY 128

Query: 133 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 192
           FQ AINM++ ID+L  +R GGV PN   KAKQRVE  I + +   P+LRCKK S GQ LL
Sbjct: 129 FQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLL 188

Query: 193 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 223
           TE+VMCF DDGVTL+NC +++S C   F+F
Sbjct: 189 TEIVMCFDDDGVTLINCNKARSNCAGSFIF 217

BLAST of IVF0012360 vs. ExPASy TrEMBL
Match: A0A6J1FBD8 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111442477 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 126/218 (57.80%), Postives = 155/218 (71.10%), Query Frame = 0

Query: 5   MARGRREIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTI 64
           MA    +I LLFV    +SL P  KSQ FDDF+FVQQWPP VCA +SG+CVG+G   FTI
Sbjct: 1   MATPNTQIFLLFVF---VSLLPMAKSQPFDDFWFVQQWPPNVCALQSGRCVGRGTNSFTI 60

Query: 65  HGVWPQKGGQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSE 124
           HG+WPQKGG S+ NCPGT FD NQIS L N L+  WP++I G  + FW HEWN HG CSE
Sbjct: 61  HGLWPQKGGNSVTNCPGTSFDFNQISHLENDLNIVWPNLITGNHKWFWGHEWNTHGICSE 120

Query: 125 SKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKK 184
           SK+    YFQ +IN+++ I++L A+RV GVVPN   K+KQRVE  I + +   P+LRCK 
Sbjct: 121 SKFDQKAYFQTSINLRHNINLLSALRVQGVVPNGASKSKQRVESAIISHFKKIPVLRCKT 180

Query: 185 DSTGQYLLTEVVMCFKDDGVTLLNCTRSKSTCGADFLF 223
            S GQ LLTE+VMC  DDGVTL+NC  +KS C  +F+F
Sbjct: 181 ASNGQVLLTEIVMCIDDDGVTLINCNIAKSNCANNFIF 215

BLAST of IVF0012360 vs. NCBI nr
Match: KAA0053765.1 (ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25637.1 ribonuclease MC-like [Cucumis melo var. makuwa])

HSP 1 Score: 446 bits (1148), Expect = 2.28e-158
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 72
           MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG
Sbjct: 1   MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 60

Query: 73  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 132
           GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY
Sbjct: 61  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 120

Query: 133 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 192
           FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL
Sbjct: 121 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 180

Query: 193 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 222
           TEVVMCFKDDGVTLLNCTRSKSTCGADFLF
Sbjct: 181 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 210

BLAST of IVF0012360 vs. NCBI nr
Match: KAA0053767.1 (ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25635.1 ribonuclease MC-like [Cucumis melo var. makuwa])

HSP 1 Score: 445 bits (1144), Expect = 9.29e-158
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 72
           MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG
Sbjct: 1   MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKG 60

Query: 73  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPY 132
           GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESK+QMLPY
Sbjct: 61  GQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKFQMLPY 120

Query: 133 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 192
           FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL
Sbjct: 121 FQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLL 180

Query: 193 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 222
           TEVVMCFKDDGVTLLNCTRSKSTCGADFLF
Sbjct: 181 TEVVMCFKDDGVTLLNCTRSKSTCGADFLF 210

BLAST of IVF0012360 vs. NCBI nr
Match: XP_004147497.3 (ribonuclease MC [Cucumis sativus] >KAE8651218.1 hypothetical protein Csa_002248 [Cucumis sativus])

HSP 1 Score: 352 bits (903), Expect = 8.58e-121
Identity = 168/225 (74.67%), Postives = 187/225 (83.11%), Query Frame = 0

Query: 1   MAVAMARGRRE---IMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQ 60
           M VAMA GRR    I+LLFVVTLSISLFP MKSQ FD FYFVQQWPPAVC GR+G+CVG+
Sbjct: 1   MVVAMAGGRRSDINIVLLFVVTLSISLFPIMKSQQFDKFYFVQQWPPAVCDGRTGKCVGK 60

Query: 61  GFRYFTIHGVWPQKGGQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWN 120
           G  YFTIHGVWPQKGG+S++NCPGT+FD N+ISSL NTLHQ   DVIN  DQ  W HEWN
Sbjct: 61  GMYYFTIHGVWPQKGGKSVINCPGTQFDFNKISSLANTLHQIMKDVINADDQFLWSHEWN 120

Query: 121 KHGTCSESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAY 180
           KHG CSES+Y M  YFQMAINMKYKI+VL A+R+GG+ PNNH KAKQRVE  +F AY+AY
Sbjct: 121 KHGVCSESRYSMKQYFQMAINMKYKINVLSALRMGGITPNNHLKAKQRVEGAMFTAYNAY 180

Query: 181 PLLRCKKDSTGQYLLTEVVMCFKDDGVTLLNCTRSKSTCGADFLF 222
           PLLRCKKDS+GQ LLTEVVMCF +DGVTLLNCT +KS C AD LF
Sbjct: 181 PLLRCKKDSSGQSLLTEVVMCFDNDGVTLLNCTTTKSNCDADVLF 225

BLAST of IVF0012360 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 276 bits (707), Expect = 4.26e-91
Identity = 132/218 (60.55%), Postives = 161/218 (73.85%), Query Frame = 0

Query: 5   MARGRREIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTI 64
           MA  +R I+LL V  L+I LFP ++SQ FDDF+FVQQWPPAVCA +SG+CVG+G R FTI
Sbjct: 1   MATTKRNIVLL-VFGLTI-LFPIVQSQTFDDFWFVQQWPPAVCALQSGRCVGRGTRSFTI 60

Query: 65  HGVWPQKGGQSIVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSE 124
           HG+WPQKGG S+ NC G  FD  +I+ L N L+  WP+VI G ++ FW HEWNKHG CSE
Sbjct: 61  HGLWPQKGGSSVTNCAGNSFDFTKIAHLENDLNIVWPNVITGNNKFFWGHEWNKHGICSE 120

Query: 125 SKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKK 184
           SK+    YFQ AINM++ ID+L  MR GGV+PN   KAKQRVE VI + +   P+LRCK 
Sbjct: 121 SKFDQAAYFQTAINMRHSIDLLSVMRTGGVIPNGASKAKQRVESVISSHFGKDPILRCKT 180

Query: 185 DSTGQYLLTEVVMCFKDDGVTLLNCTRSKSTCGADFLF 222
            S GQ LLTEVVMCF DDGVTLLNC +++S C   F+F
Sbjct: 181 ASNGQVLLTEVVMCFDDDGVTLLNCNKARSNCATSFIF 216

BLAST of IVF0012360 vs. NCBI nr
Match: XP_004147499.1 (ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 5.93e-89
Identity = 123/207 (59.42%), Postives = 154/207 (74.40%), Query Frame = 0

Query: 16  FVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCVGQGFRYFTIHGVWPQKGGQS 75
           FV  L+I LFP +KSQ FDDF+FVQQWPPAVC  +SG+CVG+G R FTIHG+WPQKGG+S
Sbjct: 12  FVFVLTI-LFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGRS 71

Query: 76  IVNCPGTKFDVNQISSLTNTLHQTWPDVINGKDQTFWEHEWNKHGTCSESKYQMLPYFQM 135
           + NC G +FD  +I+ L N L+  WP+V+ G ++ FW HEWNKHG CSESK+    YFQ 
Sbjct: 72  VTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQT 131

Query: 136 AINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLLTEV 195
           AINM++ ID+L  +R GGV PN   KAKQRVE  I + +   P+LRCKK S GQ LLTE+
Sbjct: 132 AINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTEI 191

Query: 196 VMCFKDDGVTLLNCTRSKSTCGADFLF 222
           VMCF DDGVTL+NC +++S C   F+F
Sbjct: 192 VMCFDDDGVTLINCNKARSNCAGSFIF 217

BLAST of IVF0012360 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-32
Identity = 76/218 (34.86%), Postives = 112/218 (51.38%), Query Frame = 0

Query: 13  MLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCV---GQGFRYFTIHGVWP 72
           ++  +V L      +  S+ FD FYFVQQWP + C  +   C    G+    F IHG+WP
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP 69

Query: 73  Q-KGGQSIVNCPGTK-FDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNKHGTCSES 132
             K G    NC  +K FD + IS L  ++ ++WP +   +G  + FWEHEW KHGTCSES
Sbjct: 70  NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSES 129

Query: 133 KYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKD 192
                 YFQ A+N+K K ++LGA+   G+ P+    + + +   I  +    P + C +D
Sbjct: 130 VIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD 189

Query: 193 STGQYLLTEVVMCFKDDGVTLLNC-TRSKSTCGADFLF 223
            +G   L +V +C    G  L+ C       CGA+  F
Sbjct: 190 GSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEF 227

BLAST of IVF0012360 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 70/211 (33.18%), Postives = 105/211 (49.76%), Query Frame = 0

Query: 6   ARGRREIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQCV---GQGFRYF 65
           A+G   ++L  +V     LF +   + FD FYFV QWP A C      C    G+    F
Sbjct: 3   AKGCVNVLLKLLVFQ--GLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADF 62

Query: 66  TIHGVWPQ-KGGQSIVNC-PGTKFDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNK 125
            IHG+WP   GG    NC P ++FD +QIS L ++L + WP +   + +   FWEHEW K
Sbjct: 63  GIHGLWPNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEK 122

Query: 126 HGTCSESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYP 185
           HGTCSES      YF+ A+ +K K ++L  ++  G+ P++      ++   I +     P
Sbjct: 123 HGTCSESVMDQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTP 182

Query: 186 LLRCKKDSTGQYLLTEVVMCFKDDGVTLLNC 210
            + C KD      L ++ +C    G   + C
Sbjct: 183 GIECNKDPERNAQLHQIYICVDTSGTEFIEC 211

BLAST of IVF0012360 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 68/205 (33.17%), Postives = 102/205 (49.76%), Query Frame = 0

Query: 13  MLLFVVTLSI-SLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQC---VGQGFRYFTIHGVW 72
           M  F+  L++  L+    +Q FD FYFV QWP A C  R   C    G+    F IHG+W
Sbjct: 1   MKFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLW 60

Query: 73  PQ-KGGQSIVNC-PGTKFDVNQISSLTNTLHQTWPDVI--NGKDQTFWEHEWNKHGTCSE 132
           P  K G    NC P ++FD  ++S L + L + WP +   +     FW HEW KHGTC+E
Sbjct: 61  PNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAE 120

Query: 133 SKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKK 192
           S+     YF+  + +K K ++L A+   G+ P++     + +E  I       P + C K
Sbjct: 121 SELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 193 DSTGQYLLTEVVMCFKDDGVTLLNC 210
           DS+    L ++ +C        +NC
Sbjct: 181 DSSHNSQLYQIYLCVDTSASKFINC 205

BLAST of IVF0012360 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23
Identity = 63/212 (29.72%), Postives = 99/212 (46.70%), Query Frame = 0

Query: 7   RGRREIMLLFVVTLSISLFPTMKSQIFDDFYFVQQWPPAVCAGRSGQC---VGQGFRYFT 66
           RG   + LL + +L +S   T     F+ FY+V  WP A+C  + G C    G     F 
Sbjct: 2   RGIIIVSLLILQSLVVSSSQTEPD--FNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFI 61

Query: 67  IHGVWPQ-KGGQSIVNCPGTK-FDVNQISSLTNTLHQTWPD----VINGKDQTFWEHEWN 126
           IHG+WPQ   G     C  T  FD+++IS L   + + W +         +   WEHEWN
Sbjct: 62  IHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWN 121

Query: 127 KHGTCSESKYQMLPYFQMAINMKYKIDVLGAMRVGGVVPNNHKKAKQRVEVVIFNAYHAY 186
           KHGTC +S +    YF+  +  K+K+ +L  +   G+ PN+   +   ++  I  A    
Sbjct: 122 KHGTCVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFA 181

Query: 187 PLLRCKKDSTGQYLLTEVVMCFKDDGVTLLNC 210
           P + C +D  G   L ++ +C  +     + C
Sbjct: 182 PGIECNEDVKGNKQLFQIYICLDNYAKEFVEC 211

BLAST of IVF0012360 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 92.0 bits (227), Expect = 6.3e-19
Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = 0

Query: 33  FDDFYFVQQWPPAVCAG------RSGQCVGQGF-RYFTIHGVWPQKGGQSIVN-CPGTKF 92
           FD F    QWP   C G      ++  C G      FTIHG+WP     S  + C  + F
Sbjct: 32  FDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSDF 91

Query: 93  DVNQISSLTNTLHQTWPDV-------INGKDQTFWEHEWNKHGTCSESKY-QMLPYFQMA 152
              +IS+L + L + WP +        NG   +FW HEW KHGTCS   +     YF   
Sbjct: 92  KEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTT 151

Query: 153 INMKYKIDVLGAM-RVGGVVPNNHKKAKQRVEVVIFNAYHAYPLLRCKKDSTGQYLLTEV 203
           +N+  K +V   + + G V  N+ K     +   I NA+H  P + CK+D+     + E+
Sbjct: 152 LNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDA-----IDEI 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P235402.1e-5147.67Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1[more]
P428131.4e-3134.86Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1[more]
P800221.9e-2833.66Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2[more]
P428153.0e-2633.17Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1[more]
P836185.2e-2629.25Ribonuclease-like storage protein OS=Panax ginseng OX=4054 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A5A7UJ533.6e-123100.00Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352... [more]
A0A5D3DQ691.1e-12299.52Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352... [more]
A0A0A0LHQ91.7e-9374.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825060 PE=3 SV=1[more]
A0A0A0LC372.7e-7058.57Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1[more]
A0A6J1FBD81.8e-6957.80Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111442477 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
KAA0053765.12.28e-158100.00ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25637.1 ribonuclease MC-like... [more]
KAA0053767.19.29e-15899.52ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25635.1 ribonuclease MC-like... [more]
XP_004147497.38.58e-12174.67ribonuclease MC [Cucumis sativus] >KAE8651218.1 hypothetical protein Csa_002248 ... [more]
XP_038905534.14.26e-9160.55ribonuclease MC-like [Benincasa hispida][more]
XP_004147499.15.93e-8959.42ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [C... [more]
Match NameE-valueIdentityDescription
AT2G02990.11.0e-3234.86ribonuclease 1 [more]
AT1G14220.11.3e-2733.18Ribonuclease T2 family protein [more]
AT1G26820.12.2e-2733.17ribonuclease 3 [more]
AT1G14210.14.2e-2329.72Ribonuclease T2 family protein [more]
AT2G39780.16.3e-1932.09ribonuclease 2 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036430Ribonuclease T2-like superfamilyGENE3D3.90.730.10coord: 33..220
e-value: 9.2E-50
score: 171.3
IPR036430Ribonuclease T2-like superfamilySUPERFAMILY55895Ribonuclease Rh-likecoord: 33..222
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 34..209
e-value: 3.8E-41
score: 141.3
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 15..218
NoneNo IPR availablePANTHERPTHR11240:SF49RIBONUCLEASE 3coord: 15..218
IPR033130Ribonuclease T2, His active site 2PROSITEPS00531RNASE_T2_2coord: 111..122
IPR033697Ribonuclease T2, eukaryoticCDDcd01061RNase_T2_eukcoord: 33..219
e-value: 4.12586E-64
score: 195.629

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012360.1IVF0012360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006401 RNA catabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0005576 extracellular region
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding