IVF0012121 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTCCTCTGTGATTTTATCTTCTCTTCCTCCGGCCAGAGCTCTGACTTTTAACCAACAAGACGGTCGCCACGGTCTCTTTCAAATTGGGTCTTCTGTCCGTGCCAATAACAGCAGGGCTCGTCCCTCTTTCAGGGTTCAGGCCGCCGCAAAGCCTCCGGCTGGAGTACGCTCTCTATCCTCTTCAAATTTGTGAACTTTTTTCCCATTACTGTTTCACCTGTTGAAAAAATGGTTTACATCTCAAAAGCTTGAATAAATCCAGAATAATACATTCATGCGGGCTTGTGAATTACCTATTCATTTCTGTTTTGAAGGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCTAGAGCCTGCATGATAGGCCTTATTGGGACTTTCGTAGTGGAGCTGGTGAGGTTTTCTTTTCTTCTTAATATGAAGAAAACTTTCTATCTTGTACCTTTTCTACCCATGTTTACGGGTTTTATCTGTCTGATTTTTCAGATATTGAACAAGAGTATACTTCAAGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA ATGGCGTCTTCCTCTGTGATTTTATCTTCTCTTCCTCCGGCCAGAGCTCTGACTTTTAACCAACAAGACGGTCGCCACGGTCTCTTTCAAATTGGGTCTTCTGTCCGTGCCAATAACAGCAGGGCTCGTCCCTCTTTCAGGGTTCAGGCCGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCTAGAGCCTGCATGATAGGCCTTATTGGGACTTTCGTAGTGGAGCTGATATTGAACAAGAGTATACTTCAAGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA ATGGCGTCTTCCTCTGTGATTTTATCTTCTCTTCCTCCGGCCAGAGCTCTGACTTTTAACCAACAAGACGGTCGCCACGGTCTCTTTCAAATTGGGTCTTCTGTCCGTGCCAATAACAGCAGGGCTCGTCCCTCTTTCAGGGTTCAGGCCGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCTAGAGCCTGCATGATAGGCCTTATTGGGACTTTCGTAGTGGAGCTGATATTGAACAAGAGTATACTTCAAGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA MASSSVILSSLPPARALTFNQQDGRHGLFQIGSSVRANNSRARPSFRVQAAAKPPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFVVELILNKSILQVIGVDVGKGLDLPL Homology
BLAST of IVF0012121 vs. ExPASy Swiss-Prot
Match: O81208 (Light-harvesting complex-like protein OHP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP1 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of IVF0012121 vs. ExPASy TrEMBL
Match: A0A5A7TRS8 (High-light-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001530 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.4e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0012121 vs. ExPASy TrEMBL
Match: A0A1S3B5V9 (high-light-induced protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486373 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.4e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0012121 vs. ExPASy TrEMBL
Match: A0A0A0LAI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734070 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51 Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0
BLAST of IVF0012121 vs. ExPASy TrEMBL
Match: A0A6J1CV10 (light-harvesting complex-like protein OHP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015030 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.2e-41 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of IVF0012121 vs. ExPASy TrEMBL
Match: A0A6J1J0W8 (light-harvesting complex-like protein OHP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482448 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40 Identity = 99/121 (81.82%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of IVF0012121 vs. NCBI nr
Match: XP_008442523.1 (PREDICTED: high-light-induced protein, chloroplastic [Cucumis melo] >KAA0044105.1 high-light-induced protein [Cucumis melo var. makuwa] >TYK25033.1 high-light-induced protein [Cucumis melo var. makuwa]) HSP 1 Score: 234 bits (596), Expect = 2.35e-77 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0012121 vs. NCBI nr
Match: XP_004137791.1 (light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus] >KGN58853.1 hypothetical protein Csa_001588 [Cucumis sativus]) HSP 1 Score: 210 bits (535), Expect = 4.74e-68 Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0
BLAST of IVF0012121 vs. NCBI nr
Match: XP_038905156.1 (light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]) HSP 1 Score: 183 bits (464), Expect = 3.06e-57 Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of IVF0012121 vs. NCBI nr
Match: XP_022145630.1 (light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]) HSP 1 Score: 178 bits (451), Expect = 2.93e-55 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of IVF0012121 vs. NCBI nr
Match: XP_022934608.1 (light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata] >XP_022983997.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita maxima] >KAG6580528.1 Light-harvesting complex-like protein OHP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017279.1 Light-harvesting complex-like protein OHP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174 bits (442), Expect = 6.90e-54 Identity = 99/121 (81.82%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of IVF0012121 vs. TAIR 10
Match: AT5G02120.1 (one helix protein ) HSP 1 Score: 110.5 bits (275), Expect = 9.2e-25 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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