IVF0011755 (gene) Melon (IVF77) v1

Overview
NameIVF0011755
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Locationchr03: 12035632 .. 12035895 (+)
RNA-Seq ExpressionIVF0011755
SyntenyIVF0011755
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTAGTAGAAGTCGTTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAACAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG

mRNA sequence

ATGACTCTAGTAGAAGTCGTTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAACAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG

Coding sequence (CDS)

ATGACTCTAGTAGAAGTCGTTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAACAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG

Protein sequence

MTLVEVVLKGPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLTVTRSGGRKA
Homology
BLAST of IVF0011755 vs. ExPASy TrEMBL
Match: A0A5A7TNL7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00460 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIENNPYR+LT
Sbjct: 277 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 336

Query: 79  VTRSGGRKA 88
           VTRSGGRKA
Sbjct: 337 VTRSGGRKA 345

BLAST of IVF0011755 vs. ExPASy TrEMBL
Match: A0A5A7ULW2 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004710 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIENNPYR+LT
Sbjct: 131 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 190

Query: 79  VTRSGGRKA 88
           VTRSGGRKA
Sbjct: 191 VTRSGGRKA 199

BLAST of IVF0011755 vs. ExPASy TrEMBL
Match: A0A5A7SQ80 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00300 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.3e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP +PAA PENLSVNS LPSREKSR ISYSNIQT IGCSNIREFIENNPYR+L 
Sbjct: 146 PQERKLSPTRPAAEPENLSVNSALPSREKSRVISYSNIQTLIGCSNIREFIENNPYRRLA 205

Query: 79  VTRSGGRKA 88
           VTRSGGRKA
Sbjct: 206 VTRSGGRKA 214

BLAST of IVF0011755 vs. ExPASy TrEMBL
Match: A0A5A7UMJ9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00020 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.0e-22
Identity = 57/67 (85.07%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 10  GPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFI 69
           G KRHPLTYPRKGKL PNKP A PEN SVNS+LPSREKSRAISYSNIQT IGCSNIREFI
Sbjct: 76  GQKRHPLTYPRKGKLPPNKPTARPENSSVNSVLPSREKSRAISYSNIQTLIGCSNIREFI 135

Query: 70  ENNPYRK 77
           EN   RK
Sbjct: 136 ENPERRK 142

BLAST of IVF0011755 vs. ExPASy TrEMBL
Match: A0A5A7UGC7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001680 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP +P A PEN SV S LPS+EKSRAI+YSNIQ  IGCSNIREFIENNPYR+LT
Sbjct: 110 PKERKLSPTRPTARPENPSVKSELPSKEKSRAITYSNIQALIGCSNIREFIENNPYRRLT 169

Query: 79  VTRSGGRKA 88
           VTRSGGRKA
Sbjct: 170 VTRSGGRKA 178

BLAST of IVF0011755 vs. NCBI nr
Match: KAA0054655.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 1.15e-33
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIENNPYR+LT
Sbjct: 131 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 190

Query: 79  VTRSGGRKA 87
           VTRSGGRKA
Sbjct: 191 VTRSGGRKA 199

BLAST of IVF0011755 vs. NCBI nr
Match: KAA0043181.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 3.27e-32
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIENNPYR+LT
Sbjct: 277 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 336

Query: 79  VTRSGGRKA 87
           VTRSGGRKA
Sbjct: 337 VTRSGGRKA 345

BLAST of IVF0011755 vs. NCBI nr
Match: KAA0032698.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 5.03e-30
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP +PAA PENLSVNS LPSREKSR ISYSNIQT IGCSNIREFIENNPYR+L 
Sbjct: 146 PQERKLSPTRPAAEPENLSVNSALPSREKSRVISYSNIQTLIGCSNIREFIENNPYRRLA 205

Query: 79  VTRSGGRKA 87
           VTRSGGRKA
Sbjct: 206 VTRSGGRKA 214

BLAST of IVF0011755 vs. NCBI nr
Match: KAA0057143.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 2.02e-27
Identity = 57/67 (85.07%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 10  GPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFI 69
           G KRHPLTYPRKGKL PNKP A PEN SVNS+LPSREKSRAISYSNIQT IGCSNIREFI
Sbjct: 76  GQKRHPLTYPRKGKLPPNKPTARPENSSVNSVLPSREKSRAISYSNIQTLIGCSNIREFI 135

Query: 70  ENNPYRK 76
           EN   RK
Sbjct: 136 ENPERRK 142

BLAST of IVF0011755 vs. NCBI nr
Match: KAA0054224.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 2.07e-27
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 19  PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIENNPYRKLT 78
           P++ KLSP +P A PEN SV S LPS+EKSRAI+YSNIQ  IGCSNIREFIENNPYR+LT
Sbjct: 110 PKERKLSPTRPTARPENPSVKSELPSKEKSRAITYSNIQALIGCSNIREFIENNPYRRLT 169

Query: 79  VTRSGGRKA 87
           VTRSGGRKA
Sbjct: 170 VTRSGGRKA 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TNL71.4e-2589.86NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7ULW21.4e-2589.86NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7SQ806.3e-2384.06NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UMJ97.0e-2285.07NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UGC71.3e-2078.26NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
KAA0054655.11.15e-3389.86NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0043181.13.27e-3289.86NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0032698.15.03e-3084.06NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0057143.12.02e-2785.07NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0054224.12.07e-2778.26NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011755.1IVF0011755.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane