IVF0011344 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAACCTCAAATGTTGCATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGACTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTATTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTGCATGCCAAATGGTTGCCTGGTTGGTAA ATGAATAACCTCAAATGTTGCATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGACTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTATTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTGCATGCCAAATGGTTGCCTGGTTGGTAA ATGAATAACCTCAAATGTTGCATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGACTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTATTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTGCATGCCAAATGGTTGCCTGGTTGGTAA MNNLKCCMFFFWLVTVALLVMVERSIATPLEHWGVRISNDMQSKQTLFLHCKSKDDDLGRLNLGFAQSFSWRFKVNLWQTTLYWCYMRKKEPNHIALEVFWPESISKSWLSHRCQGNRCFWSVRDDGIYVKNIPENKFELHAKWLPGW Homology
BLAST of IVF0011344 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.9e-26 Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11 Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09 Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy Swiss-Prot
Match: Q9LW23 (S-protein homolog 22 OS=Arabidopsis thaliana OX=3702 GN=SPH22 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07 Identity = 34/106 (32.08%), Postives = 55/106 (51.89%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.6e-29 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28 Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy TrEMBL
Match: A0A5N6QHU0 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28 Identity = 61/121 (50.41%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of IVF0011344 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
BLAST of IVF0011344 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus]) HSP 1 Score: 193 bits (491), Expect = 3.38e-60 Identity = 85/146 (58.22%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of IVF0011344 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 153 bits (387), Expect = 1.05e-44 Identity = 71/119 (59.66%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of IVF0011344 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 153 bits (387), Expect = 1.44e-44 Identity = 71/119 (59.66%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of IVF0011344 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 144 bits (363), Expect = 4.64e-41 Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of IVF0011344 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 144 bits (363), Expect = 4.22e-40 Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of IVF0011344 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of IVF0011344 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 118.6 bits (296), Expect = 4.2e-27 Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of IVF0011344 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12 Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of IVF0011344 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11 Identity = 42/134 (31.34%), Postives = 64/134 (47.76%), Query Frame = 0
BLAST of IVF0011344 vs. TAIR 10
Match: AT4G10895.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10 Identity = 38/142 (26.76%), Postives = 61/142 (42.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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