IVF0011221 (gene) Melon (IVF77) v1

Overview
NameIVF0011221
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Locationchr01: 10295866 .. 10298866 (+)
RNA-Seq ExpressionIVF0011221
SyntenyIVF0011221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCAGGCAGTGGCAAGTTCCGATTCGGAAATCTCCTCAAAACCCTAAAATCAACCATTTTTCTTCTTCGTTTCTACCCTTTTTACCGATCTTCGTCGGCAACGCAGGAATTCACCCACTTCCCATATCTCTGATGGCATCCAAATCGAAGAGCGAAAACCCTCACACCGGTGACGGTGCTAGCCCCGGGTTTGTGTCTTTTTCTTTCTCAATTTGCTTCTTCCCCCTTTTAGGCCTGCTTAACGACTTCTTTGTCTCAATTTTCCTGAGATCTTGATTTTTTTGTTCTCAATCTTTTGCTACTTTTATTTTCCCAGGAAGATTTTCATTGGAGGCTTGGCGAAAGATACAACTTACAGTGAGTTTTTGTTCCTATGTTTAATTCTGCAGAAAATGGTTTTTTTTCCTTGATAGGTATTTTTTTTGTACAGATAGTTTATGAACTTTTATTTTGTGGTTTAGTTGTTTATACTTCAACTAGATCTTTGGAAGAGGATCGATAATTAAATGAATATTTGATTTTGCTAAATATGTAAATTGATCAAGTGCAATGTTAGCTTAGATCCGACTGCAGCTGACATTCTTTCTATTTTGTTTCTGGAAAATCCAGCTCAATTCAACAAGCATTTTGGGAATTACGGAGAGATTACAGACTCAGTGATCATGAAAGATCGGTACACAGGACAACCTAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTTATCAATGGGAAACAAGTGCGTGATCCAATTTATTATGATTTTACTGGCTAATGGAATATTTTATTCTGCTAAATTGGTTCAATGGCGTTACTTTCTGGTCTCTCATGGTCTTATGAGGTTTCTAATGAGTTTCTTTTCAGTTCTGTTGGATGGTTAATATTTTTTCTTTGATACCCTCTCTTCTTTCTTGGTTATTTGTTTTGCTTTCTTTTTTCTGAGACTTACTTTGAATGAAATTAGGTTGAAATTAAGAGGACCATTCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACAAAGAAAATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGGTAGGGTTATTTGAGTTTTATGTCGCAGCCTTTTTTTTTTAAATAAAAAGTTTGTGGTACCAATATATGTTTCAGCCACTGTTTATATGTTCTTCTCATTAGCTTTAGTTTTTGTGTTATGTGTTATAATCTGTTTAGTACAACACGTCCTGCCTTTAGATGATTTTACACTTTCTTTTCAAAACTTATTCATTGCTGTAGTTTATATGTTTTCTGTTTAATCTATCTATTGTATTTCTTGCTTGTAGATGAATTCAAACATTTCTTTTCCAAGTATGGGAAAATTGTGGAACACCAGATTATTCGTGATCATGAGACGAACCGCTCGCGGGGCTTTGGGTTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTGTCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGAGCATATATAAATGGACTGCAAGTGAGCAAAGTGTAAACAGAATCCTGTTTCCCAGAGATTTTGCACCATTCTATTCTCCGGTTTTAATAATAACGGACTATTTTCAACCTTCACTCTATGCGAATGTATTTTTTAAGCATTATGCCATTAGTTACTTCTTTTTGCTACTAATTTTAGGTGGAGGTTATTACAGGTATAGATTTCCTAAGGGAAGGGCTATCAAAATAGTTAAATTGCAGAAGATTTAGGTTGACTAAGTTACTTTGTTGTAGGTGGAGATCAAGAAAGCTGAACCCAAGAAATCCTCAAACCCACTACCTGCTCCTGCTTATGGTAGCAACTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGCCCCTTTAGGAATCCTGGTGGTATTGGTGGTAGGATTGGAAGTGGCTATGGTTATGGTAGTGGTGGTGATTTTGGTGGTGGTTATGGAGGGTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGACTCATCCCTTGGTTATTCTAGTCGCTTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGACGAGGGGTTGATGGATATGGGAGCTATGGAAGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGTGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAGAATCATTGCGTAGTCAGTACCGTCTATCCCCTTTGAAGCTAGAAAAGAGACTTCAAACACATTAGTCAGTACCGTCTTTTCTCCATTGCTGTCTTGCTAAGATTTGCCATAGTCTTCAAACACAGGTTCCTTTAGTTTTGTGGCCCATTGATAGGCGCTTCTCACAAATACTAGAGGTCCCAAAGAAGCGTTTGAAAGGCTGGAAGAGAGTGTATTAGACATTTCATTGTATGGTTTTAGATACTATTATGTAGACTACTGCAAGCTAGTTTGTGCCTAATATGGCTGTCCTGATCTAGTACAATTTAAATGTAGTGTGATGTCTGCTGTGGTGTAGGTTTTAGCATATACTTTTTCTTGGTTGTGTTTATTCCTCACGACTCACGTTAGTTTGATATCTAGATAGATTTATTCTGTTCTATAAATATGGCCTAGTCTTCTGCTCTTATTTTAGTTTGTTGATGATAGACTGCTTGTAGAAAAAGAAAAAAGAAATCTCCCTGGAAATCTAGGATGAGGAATATTACTTGTATTGATTTATTGATCCTGCTAGCTTAGAGAAGCTCCCATCGGAAGGGGACGTATATTTTATTAGAAAGATATTGCATAGTGATTCCCCTCTCTCTCTCATACACACTAATGATTAAGGCTGTCTGTCTGAGAAATATAAATTTGAAAAACTGGAAGTTGAACA

mRNA sequence

CTTTCAGGCAGTGGCAAGTTCCGATTCGGAAATCTCCTCAAAACCCTAAAATCAACCATTTTTCTTCTTCGTTTCTACCCTTTTTACCGATCTTCGTCGGCAACGCAGGAATTCACCCACTTCCCATATCTCTGATGGCATCCAAATCGAAGAGCGAAAACCCTCACACCGGTGACGGTGCTAGCCCCGGGAAGATTTTCATTGGAGGCTTGGCGAAAGATACAACTTACACTCAATTCAACAAGCATTTTGGGAATTACGGAGAGATTACAGACTCAGTGATCATGAAAGATCGGTACACAGGACAACCTAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTTATCAATGGGAAACAAGTTGAAATTAAGAGGACCATTCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACAAAGAAAATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAATTCAAACATTTCTTTTCCAAGTATGGGAAAATTGTGGAACACCAGATTATTCGTGATCATGAGACGAACCGCTCGCGGGGCTTTGGGTTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTGTCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCCAAGAAATCCTCAAACCCACTACCTGCTCCTGCTTATGGTAGCAACTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGCCCCTTTAGGAATCCTGGTGGTATTGGTGGTAGGATTGGAAGTGGCTATGGTTATGGTAGTGGTGGTGATTTTGGTGGTGGTTATGGAGGGTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGACTCATCCCTTGGTTATTCTAGTCGCTTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGACGAGGGGTTGATGGATATGGGAGCTATGGAAGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGTGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAGAATCATTGCGTAGTCAGTACCGTCTATCCCCTTTGAAGCTAGAAAAGAGACTTCAAACACATTAGTCAGTACCGTCTTTTCTCCATTGCTGTCTTGCTAAGATTTGCCATAGTCTTCAAACACAGGTTCCTTTAGTTTTGTGGCCCATTGATAGGCGCTTCTCACAAATACTAGAGGTCCCAAAGAAGCGTTTGAAAGGCTGGAAGAGAGTGTATTAGACATTTCATTGTATGGTTTTAGATACTATTATGTAGACTACTGCAAGCTAGTTTGTGCCTAATATGGCTGTCCTGATCTAGTACAATTTAAATGTAGTGTGATGTCTGCTGTGGTGTAGGTTTTAGCATATACTTTTTCTTGGTTGTGTTTATTCCTCACGACTCACGTTAGTTTGATATCTAGATAGATTTATTCTGTTCTATAAATATGGCCTAGTCTTCTGCTCTTATTTTAGTTTGTTGATGATAGACTGCTTGTAGAAAAAGAAAAAAGAAATCTCCCTGGAAATCTAGGATGAGGAATATTACTTGTATTGATTTATTGATCCTGCTAGCTTAGAGAAGCTCCCATCGGAAGGGGACGTATATTTTATTAGAAAGATATTGCATAGTGATTCCCCTCTCTCTCTCATACACACTAATGATTAAGGCTGTCTGTCTGAGAAATATAAATTTGAAAAACTGGAAGTTGAACA

Coding sequence (CDS)

ATGGCATCCAAATCGAAGAGCGAAAACCCTCACACCGGTGACGGTGCTAGCCCCGGGAAGATTTTCATTGGAGGCTTGGCGAAAGATACAACTTACACTCAATTCAACAAGCATTTTGGGAATTACGGAGAGATTACAGACTCAGTGATCATGAAAGATCGGTACACAGGACAACCTAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTTATCAATGGGAAACAAGTTGAAATTAAGAGGACCATTCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACAAAGAAAATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAATTCAAACATTTCTTTTCCAAGTATGGGAAAATTGTGGAACACCAGATTATTCGTGATCATGAGACGAACCGCTCGCGGGGCTTTGGGTTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTGTCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCCAAGAAATCCTCAAACCCACTACCTGCTCCTGCTTATGGTAGCAACTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGCCCCTTTAGGAATCCTGGTGGTATTGGTGGTAGGATTGGAAGTGGCTATGGTTATGGTAGTGGTGGTGATTTTGGTGGTGGTTATGGAGGGTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGACTCATCCCTTGGTTATTCTAGTCGCTTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGACGAGGGGTTGATGGATATGGGAGCTATGGAAGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGTGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAG

Protein sequence

MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Homology
[Close]
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 137/396 (34.60%), Postives = 204/396 (51.52%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF NYGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKK 198
           F+ +F  YG + +  I+ D  TNR RGFGF+ F+ E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGSGYGYGSGGDFGGGYGGFGG--NSLGGYRGDSSLGYSSR------FG--------- 318
           G  G G GYG+G + G GYG +GG   S GGY   ++ GY +       +G         
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 ----PYSGGFGG-GYGTS--------------------------GLGGYGRGVDGYGSYG 345
               P S G+G  GYG+                           G GGY     GYG+  
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

[Close]
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match: P21522 (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-33
Identity = 141/351 (40.17%), Postives = 186/351 (52.99%), Query Frame = 0 

Query: 8   ENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITY 67
           EN H G+     K+FIGGL   TT     +HF  +GEI D V+MKD  T + RGFGFITY
Sbjct: 7   ENDH-GEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 66

Query: 68  ADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQ-GQSKDFKT-KKIFVGGIPSTVTEDEFK 127
           +   +VD       H ++G+ VE KR +P+ + G+ +   T KK+FVGGI   + E++ +
Sbjct: 67  SRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLR 126

Query: 128 HFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEI-LSKGNMIDMSGTQVEIKKA 187
            +F +YG +V   I+ D ET + RGF F+ F++ + VD+I LS+ + I   G  +++KKA
Sbjct: 127 DYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQI--RGKHIDVKKA 186

Query: 188 EPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPG---------PFRNP-- 247
            PK  +        G   R        GG+GG  GD+    G G         P+ N   
Sbjct: 187 LPKGDA----PGGRGGGGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRG 246

Query: 248 ------GGIGGRIGSGYGYGSGGDFGGG--YGGFGGNSLGGYRGDSSLGYSSRFGPYSGG 307
                 GG GG +G G  +G GG  GGG  YGG GG S GG+  D   GY+S  GP S G
Sbjct: 247 GGGDRWGGGGGGMGGGDRWGGGGGMGGGDRYGGGGGRS-GGWSND---GYNS--GPQSDG 306

Query: 308 FGGGYGTSGLGGYGRGVDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGG 336
           FGGGY  S  GG  RG  GYG   S+ Y    D G   S GG GG YG GG
Sbjct: 307 FGGGYKQSYGGGAVRGSSGYGGSRSAPYS---DRG---SRGGGGGGYGSGG 338

[Close]
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.5e-32
Identity = 133/344 (38.66%), Postives = 178/344 (51.74%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVD-KVIE 79
           K+FIGGL+ +TT     +HF  +G++TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E   + +F  YGKI   
Sbjct: 88  RPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETI 147

Query: 140 QIIRDHETNRSRGFGFIVFEEEEVVDEI-LSKGNMIDMSGTQVE--IKKAEPKKSSNPLP 199
           +++ D ++ + RGF F+ F++ + VD+I + K + I++   +V+  + K E + +S    
Sbjct: 148 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEMQTASAQRG 207

Query: 200 APAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGSGGDFGG 259
               GSN   R  N G GG GG  G+F  G   G F N GG GG  G G GYG GGD   
Sbjct: 208 RGGGGSNFMGRGGNYG-GGDGGGGGNFGRG---GGFGNRGGYGGGGGRGGGYGGGGDGYN 267

Query: 260 GYGGFGGNSLGG-YRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGSSGY 319
           G+GG GGN  GG   G    G S  +G   GG+GGG G  G G  G G DGY   G+ G 
Sbjct: 268 GFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYGGGGGGGGAG--GGGYDGYNEGGNFGG 327

Query: 320 GGGYDSGPGASYGG----------AGGLYGRG-GYSGSSRYHPY 346
           G   D G   SYGG          AG   GR  G SG S   PY
Sbjct: 328 GNYNDFG---SYGGQQQSNYGPMKAGNFSGRSTGGSGGSSSGPY 362

[Close]
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 136.0 bits (341), Expect = 8.3e-31
Identity = 131/344 (38.08%), Postives = 178/344 (51.74%), Query Frame = 0 

Query: 5   SKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGF 64
           SKSE+P   +     K+FIGGL+ +TT      HF  +G +TD V+M+D  T + RGFGF
Sbjct: 2   SKSESPKEPEQLR--KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 61

Query: 65  ITYADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQGQ--SKDFKTKKIFVGGIPSTVTED 124
           +TYA    VD  +    H ++G+ VE KR + +   Q        KKIFVGGI     E 
Sbjct: 62  VTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEH 121

Query: 125 EFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIK 184
             + +F +YGKI   +I+ D  + + RGF F+ F++ + VD+I+ +     ++G   E++
Sbjct: 122 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ-KYHTVNGHNCEVR 181

Query: 185 KAEPKKSSNPLPAPAYGSNSRARSFNDGF-GGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 244
           KA  K+        +  S+ R RS +  F GG GG +G  D     G F   GG GG  G
Sbjct: 182 KALSKQE-----MASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 241

Query: 245 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGP-YSGGFGG-GYGTSGLGGYG 304
            G GYG  GD   GY GFG +  GGY G          GP YSGG  G G G  G G  G
Sbjct: 242 GG-GYGGSGD---GYNGFGND--GGYGGG---------GPGYSGGSRGYGSGGQGYGNQG 301

Query: 305 RGVDGYGSYGS--SGYGGGYDSGPGASYGGAGGLYGRGGYSGSS 341
            G  G GSY S  +G GGG+  G G+++GG G     G Y+  S
Sbjct: 302 SGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQS 322

[Close]
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 8.3e-31
Identity = 124/339 (36.58%), Postives = 171/339 (50.44%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF  +G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E   + +F KYGKI   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPLPAPA 199
           +++ D ++ + RGF F+ F++ + VD+I+ +     ++G   E+KKA  K+        +
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ-----S 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGSGGDFG--GG 259
            GS       +  F G GG++G                     G G  +G GG+FG  GG
Sbjct: 216 AGSQRGRGGGSGNFMGRGGNFG---------------------GGGGNFGRGGNFGGRGG 275

Query: 260 YGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGSS-GYG 319
           YGG GG S G Y G    GY+  FG   G +GGG G S  GGYG G  GYG+ G   G G
Sbjct: 276 YGGGGGGSRGSYGGGDG-GYNG-FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGG 335

Query: 320 GGYD------SGPGASYGGAGGLYGRGGYSG--SSRYHP 345
           GGYD      +  G +YGG G     G YSG   S Y P
Sbjct: 336 GGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGP 345

[Close]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match: A0A5A7U1Z1 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001410 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.8e-188
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match: A0A1S3CI79 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501266 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.8e-188
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match: A0A0A0K3W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 8.6e-188
Identity = 346/347 (99.71%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNPLPAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match: A0A6J1IWT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480620 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match: A0A6J1FLG0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446490 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. NCBI nr
Match: XP_008463022.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK08000.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 667 bits (1722), Expect = 1.77e-241
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. NCBI nr
Match: XP_004149406.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothetical protein Csa_015841 [Cucumis sativus])

HSP 1 Score: 666 bits (1719), Expect = 5.06e-241
Identity = 346/347 (99.71%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNPLPAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. NCBI nr
Match: XP_038899501.1 (heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida])

HSP 1 Score: 651 bits (1680), Expect = 4.79e-235
Identity = 340/349 (97.42%), Postives = 344/349 (98.57%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTH+INGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEF+HFFSKYGK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFQHFFSKYGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYG SYGDFDAGFGPGPFRNPGGIGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGSSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGSGGDFGGGYGGFGGNSLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSG--SSRYHPYAR 347
           VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSG  SSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGTGSSRYHPYAR 349

[Close]
BLAST of IVF0011221 vs. NCBI nr
Match: XP_022941092.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_022981531.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >KAG6607739.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 642 bits (1657), Expect = 1.42e-231
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. NCBI nr
Match: XP_023525200.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 640 bits (1651), Expect = 1.17e-230
Identity = 332/347 (95.68%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of IVF0011221 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-128
Identity = 262/360 (72.78%), Postives = 288/360 (80.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQV 180
           TEDE K FF+KYG +VEHQ+IRDHETNRSRGFGF++F+ EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFG--PGPFRNPGGIG 240
           EIKKAEPKKS N  P P+YGS+ R RS ND +  YGG YG FD G+G  PGP R+ GG  
Sbjct: 181 EIKKAEPKKSLNRSP-PSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPA 240

Query: 241 GRIGSGYGYGSGG---DFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGG-GYGTS 300
            R   GYGYG G    +FGGGY  +GG SLGGYR +  LGYSSRFGPY  GFGG GYG  
Sbjct: 241 SRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG 300

Query: 301 GLG---GYGR-GVDGYGSYGSSGYGGGYDS-GPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G G   GY R G +GYG YG  GYGG Y+S GPG SY GAGG YGR GYS SSRYHPYAR
Sbjct: 301 GEGAYLGYPRGGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGR-GYSSSSRYHPYAR 358

[Close]
BLAST of IVF0011221 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-88
Identity = 210/397 (52.90%), Postives = 253/397 (63.73%), Query Frame = 0 

Query: 10  PHTGDGA-SPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYA 69
           PH+G G  S GKIF+GGLA++TT  +F KHFG YGEITDSVIMKDR TGQPRGFGF+TYA
Sbjct: 32  PHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYA 91

Query: 70  DPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFS 129
           D SVVDKVI+D H+I GKQVEIKRTIP+G   S DFKTKKIFVGGIPS+V +DEFK FF 
Sbjct: 92  DSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFM 151

Query: 130 KYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKS 189
           ++G++ EHQI+RDH T RSRGFGF+ +E E++VD +L+KGN I++SGTQVEIKKAEPKK 
Sbjct: 152 QFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKK- 211

Query: 190 SNPLPAPAYGSNSRARSFNDGFG-GYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGS 249
            N +  P+        +F  G+G GYGG +G    G G GP+++ GG GG    GYG G 
Sbjct: 212 PNSVTTPSKRFGDSRSNFGGGYGDGYGGGHGGGYGGPG-GPYKSGGGYGGGRSGGYG-GY 271

Query: 250 GGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGG----------------------- 309
           GG+FGG  GG  G  +G YRG+ +LGYS R+G   GG                       
Sbjct: 272 GGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMYG 331

Query: 310 ----------------FGGGYGTSGLGGYGRGVDGYGSYGSSGYGGGYD----------- 348
                           +GGGYG+SG+GGYG G+ G G  G  G GGGYD           
Sbjct: 332 GSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRG-GGGYDMGGVGGGGAGG 391

[Close]
BLAST of IVF0011221 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 308.1 bits (788), Expect = 8.7e-84
Identity = 149/184 (80.98%), Postives = 166/184 (90.22%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQV 180
           TEDE K FF+KYG +VEHQ+IRDHETNRSRGFGF++F+ EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKK 183
            + K
Sbjct: 181 SLYK 184

[Close]
BLAST of IVF0011221 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 203.0 bits (515), Expect = 3.9e-52
Identity = 140/343 (40.82%), Postives = 195/343 (56.85%), Query Frame = 0 

Query: 16  ASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
           +SPGK+F+GG++ +TT   F  +FG +GE+ DSVIM DR TG PRGFGF+T+AD +V +K
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 76  VIEDTHVINGKQVEIKRTIPKGQGQS---KDFKTKKIFVGGIPSTVTEDEFKHFFSKYGK 135
           V+E+ HVI+ ++V++KRT+P+G   +      KT+KIFVGG+P  + EDE K++F  YG 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 136 IVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPL 195
           I+EHQI+ DH T RSRGFGF+ F+ E+ VD + S G + ++   QVEIK+AEPK++    
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR-- 242

Query: 196 PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGSGGDFG 255
                         ++ F  YG S          G +       G+    Y   S     
Sbjct: 243 --------------DNSFRSYGAS----------GKYDQEDSYSGKANEDYSMYS----- 302

Query: 256 GGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTS--------GLGGYGRGVDGY 315
            GYGG+GG   G Y G+S +  +  +G Y GG+G GYG          G GGY     GY
Sbjct: 303 -GYGGYGG--YGAYAGNSMVNPAGFYG-YGGGYGYGYGYGGQMFNMGYGAGGYSHMGSGY 362

Query: 316 GSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G   ++ YGGG   G G +   +G   G  G SG  RYHPY +
Sbjct: 363 GVAAAAAYGGGKSHGNGNNGSSSGKGNGTNG-SGPDRYHPYQK 369

[Close]
BLAST of IVF0011221 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-42
Identity = 137/396 (34.60%), Postives = 204/396 (51.52%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF NYGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKK 198
           F+ +F  YG + +  I+ D  TNR RGFGF+ F+ E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGSGYGYGSGGDFGGGYGGFGG--NSLGGYRGDSSLGYSSR------FG--------- 318
           G  G G GYG+G + G GYG +GG   S GGY   ++ GY +       +G         
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 ----PYSGGFGG-GYGTS--------------------------GLGGYGRGVDGYGSYG 345
               P S G+G  GYG+                           G GGY     GYG+  
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

The following BLAST results are available for this feature:
BLAST of IVF0011221 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0342.3e-4134.60Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
P215225.2e-3340.17Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americ... [more]
P519927.5e-3238.66Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P... [more]
P096518.3e-3138.08Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE... [more]
P519918.3e-3136.58Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE... [more]
BLAST of IVF0011221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U1Z13.8e-188100.00Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3CI793.8e-188100.00heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350126... [more]
A0A0A0K3W88.6e-18899.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1[more]
A0A6J1IWT71.3e-18095.97heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FLG01.3e-18095.97heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of IVF0011221 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463022.11.77e-241100.00PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.... [more]
XP_004149406.15.06e-24199.71heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothet... [more]
XP_038899501.14.79e-23597.42heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida][more]
XP_022941092.11.42e-23195.97heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_02298153... [more]
XP_023525200.11.17e-23095.68heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo][more]
BLAST of IVF0011221 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13224.24.4e-12872.78RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G40490.11.5e-8852.90RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.18.7e-8480.98RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G17640.13.9e-5240.82RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G14300.11.7e-4234.60RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 20..91
e-value: 7.7E-20
score: 81.9
coord: 108..181
e-value: 3.4E-20
score: 83.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 21..88
e-value: 2.6E-14
score: 52.8
coord: 109..175
e-value: 8.1E-17
score: 60.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 19..95
score: 15.32331
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..185
score: 18.444448
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..97
e-value: 2.7E-23
score: 84.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 98..219
e-value: 7.0E-25
score: 89.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
NoneNo IPR availablePANTHERPTHR48033:SF6RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..100
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011221.1IVF0011221.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding