IVF0011193 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAATTGTGACGACATTGACGAAGTTAACGAGAGGGACTCCGCATACGCCACCACCACCGCTACAGAAGATATTCAGTACATTGACACGACAACCGAGTGGTCTAACTGGCGCGACGAATTAGCTGAAGCAATGTTCACAGAATGGCAGTTGCGTAATGCTTAA ATGACAAATTGTGACGACATTGACGAAGTTAACGAGAGGGACTCCGCATACGCCACCACCACCGCTACAGAAGATATTCAGTACATTGACACGACAACCGAGTGGTCTAACTGGCGCGACGAATTAGCTGAAGCAATGTTCACAGAATGGCAGTTGCGTAATGCTTAA ATGACAAATTGTGACGACATTGACGAAGTTAACGAGAGGGACTCCGCATACGCCACCACCACCGCTACAGAAGATATTCAGTACATTGACACGACAACCGAGTGGTCTAACTGGCGCGACGAATTAGCTGAAGCAATGTTCACAGAATGGCAGTTGCGTAATGCTTAA MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA Homology
BLAST of IVF0011193 vs. ExPASy TrEMBL
Match: A0A5D3BGE3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00040 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.9e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0011193 vs. ExPASy TrEMBL
Match: A0A5A7TYT9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00870 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of IVF0011193 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0
BLAST of IVF0011193 vs. ExPASy TrEMBL
Match: A0A5A7U2Y8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00810 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.6e-16 Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of IVF0011193 vs. ExPASy TrEMBL
Match: A0A5A7V4Q8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00240 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.7e-16 Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of IVF0011193 vs. NCBI nr
Match: TYJ97711.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (282), Expect = 1.85e-31 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0011193 vs. NCBI nr
Match: KAA0046501.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (272), Expect = 1.25e-28 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of IVF0011193 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 2.29e-23 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0
BLAST of IVF0011193 vs. NCBI nr
Match: KAA0049604.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15962.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.3 bits (225), Expect = 1.06e-22 Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of IVF0011193 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 5.37e-22 Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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