IVF0011060 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATTTGGTCTTTGTAATGCACCGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTCCACAGTTTATGGTGATAGTTTTGATGAATGTTTAGCCAGTTTAGAATTAATTCTAAATAGATGAATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGATGTTAG ATGCCATTTGGTCTTTGTAATGCACCGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTCCACAGTTTATGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGATGTTAG ATGCCATTTGGTCTTTGTAATGCACCGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTCCACAGTTTATGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGATGTTAG MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDSTVYETNLVLNYEKCHFMVSHGIVLGC Homology
BLAST of IVF0011060 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05 Identity = 28/79 (35.44%), Postives = 36/79 (45.57%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05 Identity = 29/79 (36.71%), Postives = 35/79 (44.30%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy TrEMBL
Match: A0A151TW73 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan OX=3821 GN=KK1_010562 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.4e-21 Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy TrEMBL
Match: A0A6P8DCT8 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204368 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 7.1e-21 Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy TrEMBL
Match: A0A392P218 (Reverse transcriptase domain-containing protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.3e-21 Identity = 54/79 (68.35%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy TrEMBL
Match: A0A2I0ICA2 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_037987 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.3e-21 Identity = 53/79 (67.09%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0011060 vs. ExPASy TrEMBL
Match: A0A151T1R1 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan OX=3821 GN=KK1_023407 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 53/79 (67.09%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of IVF0011060 vs. NCBI nr
Match: KYP78693.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan]) HSP 1 Score: 108 bits (269), Expect = 5.49e-29 Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of IVF0011060 vs. NCBI nr
Match: KYP71307.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan]) HSP 1 Score: 110 bits (275), Expect = 3.38e-28 Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0011060 vs. NCBI nr
Match: KYP49023.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan]) HSP 1 Score: 107 bits (267), Expect = 4.14e-28 Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of IVF0011060 vs. NCBI nr
Match: RYA56915.1 (hypothetical protein DD596_25350, partial [Enterobacter cloacae complex sp. 4DZ3-28B]) HSP 1 Score: 108 bits (270), Expect = 6.65e-28 Identity = 53/79 (67.09%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of IVF0011060 vs. NCBI nr
Match: KYP30887.1 (Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan]) HSP 1 Score: 107 bits (267), Expect = 7.05e-28 Identity = 52/79 (65.82%), Postives = 55/79 (69.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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