Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGCAGTCACTGAAGGAAGATCTTCCATTTCTAGCGACTCAAGCAACTCTTATGCCTCAAGCGATTCAAGTCATTCAAGTCATTCTTCAGGTAATAGCCCCCGCGACTCCCCATCCCCTGTCTTACTAGAAAATACAGTGGTGTTAGTAAGACGTTTCTTTCATGACGATTGGCAAAAAATCCTACAAAATTTGAGGAAACAAACAGAGGAATCTTTTACCTACAACGCTTTCCATGCTGAAAAGGCCCTGGTGCACTTCAACTCAAATGTTCCCGCGAACCTTCTCTGTCAAAACAAAGGGTGGACAACCGTTGGGAAATACATGGTCAGGTTCGAAAAATGGGCTCCTGCCTCCCATGCCTCTCCTAAACTCATTCCTAGCTATGGAGGATGGACAACCTTTAGAGGAATTCCACTACATTTATGGAACATGAAGACCTTTCAACAAATCGGGAAAGCATGTGGAGGTCTGCTTAAAGTAGCCGAGGAAACAAAGACAGCAAGAAACCTGATTGAAGCAAAATTAAAAATCAGATACAACTACTCAGGTTTTTTACCAGCTTATGTGAAGATCTTTGACCAAGAAGGAAACAAATTTGTTGTTCAAGTAATCACCCACTCAGAAGGAAAATGGTTAATGGAAAGGAATGTCAGATTACATGGTACCTTCAAGAGGCAAGCTGCGGCTTCTTTCGATGAATTCAATCCCGATTCAGAGCAATTCCTGTTCGATGGTCTGGAGGCCATTTCACCGGATCTTCCGAACACCTTCTCCGGCAGCCGCAAAAGCACTTCCCCGGAGCAGCCATCTGCATTAAAATCAGTCATCATTAAACCTGCCAGAGATGCCACGTCGCCAACTACTTTAAATGAAGAGGTAGTTAATGATAACAGTTTGTGTAACGCTCCGAAATTTTTAAGGTAAAATTTTTCTCGTTTTATTTAAAGTGCAAGTTGATATAATAATAATATAATATTAATTATATTATTATTATTAATGTTTATTTTATTGGTTATAATATTAATATTATAAATATTATTATAAATTAATATTATAGAAATAATGTTATTTCTAAAACAATAAAATAAATTATTATTTATTTAATATTAATATTATTAATATATTATTATTATTACTTTATTATTATTATTATTATTTGTATTTAATATATATAATTATTATTTAATTTAAATTATTAATATTAAATAGTTATTAAGAATTATATATATATATATATATAATGATTTTTTTTTTTAAAAATAAAACCCTAACCGCGCAGCCCCCCCCCCCCCCCCGTTTTTCTTTCTTTTCTCCTTCTTCCTCCTCGCGCGCGCAGCCTCCTCCATCTCCGTTTTCTCTCCCGACGCCGCCACCCACCGTTTTCATCTCGTTCTTCTTCATTTCCGTATCACCGACGGCTCCTTCGTCTCCAGCTGGGTTGTCCTTCGGCCAACGCGACCTCAGCCCTTCTTCTCCGGTGAACCCGAGCCCACAGTCGCAGCCGTGAAGCTTGCCGGATCTCCGTTTCGCACCCAGCCAACGCCACCGCCGTCTGTCCATTTATTTCCACCGTCGGACGCCTCCCAGCTGTCGTTCGTCACGGTCGTCGGACGCCGGAGAACCACCGCTCGCGATTGCCCGTTTCGCGCTGCAAAGACCCGACCCGGTCCCAAGCCAACCCGACCCGAAACCACTTCCAGCCGAGCCGAGCGAGCCGAACCAAGCCGAGCCGCGAGCCGCACCAAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAACCAAGCCAAGCCGAGCCGAGCCGAGCCGAGAACCAAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCACCTAAGCCTTCCTTCCTTCATTTCGGTTCACGGTGAGTCTTCGGTAAGGATTGTTCTGATGAATTCCCTAATATTACCTCGTCCGATTCGAGTTTGAATGTTGGATTAAGATATGGCCCTACTTTTCTTCCTTGAAGGTAGTGCAGAGTTGACGCTTAAGTTCTCGGGTTCCGCGGCAGACCTGGTGGGAGTTAGCTTCCTTTCCTGGGGTAAGTCAACGGATGACCTTCTTAAAACAACTGCTACTAACGTCATCAACTAAAACCGTTGTGTTTTCGTTTAGGTTGATCTGTTGAGCGTGGATTCAATCGAGGGGCATAACCGACTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGTTAAAACCGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTGCTGAATATCTGTATGCGTGTTGACTGTTAAGTACTGATATTATATTTTGTCTGATGAAATTATACTGTGACTGCTATTTGTGGATTGAAATTATATGTTGATGGACCTTAAAGTTACGGTTTAGTATGTATTAAACACTGTTCTGGATGTGGTTCATGGAGTTTGGACGGGGAAGGACAGTGAGTCCGGTTTTGGTTGGTTAGTCGATTGGACCTAGGGTTTCCCTATTGGTGTGCGAATCGGTAATGCATAAAGCAACTGAGGGTGTAGATGTTAAACCTATACTATCTGACTGACAAAGTCTATGGCGGGACTGTAATATGAATGCCGTTGAGATGTGACTAATGTAGACAGTTTAGTAAGGGCTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACTGAGATGTGCATCCTTCGGGAGCACTAGACTGATATGTACATCCTTCGGGAGTACTAGACTGATATGTGTATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGGGCACTAGACTGATATGTGCATCCCTCGGGAGCACTAGACTGATATGTGCATCCTTCGAGAGCACTAGACTGATATGTGCGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTTCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTCTCTTCTTTAACTTTTCAGGTAGGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGTTTTTCTTTCGCTTCCGCTATGTGTTTTGTCAAAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATTTTGTGACTTTTTGAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGATTATACTGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTATGTTGAATTGTCGAGTTTTGGTATTTGGTAGTGACCTCAGCTTAGTCCGGAAAAGTTGGGTCGTTACAGTTTGCATGCAACGGCTATTAAATCGAAGGGAAAGATTGTACATGGGATATCAAATGATTGCTCCTTGGATAAAGGAAAGCAAAAGGTTGACATTCCGTCTCAACTAACTTCAGCATTTATTTTTGACAAGCCCAAAAGAAAAGTCTCCTTTAATTCCCCCGGTAATAAAACCACTTTTTTTAATCCGGATTCTGCCCCAGCCAATCATTCCCCTCCTTTAAGCTCCCCGGAGAAAAAACAAAGAGTCAGCAGAGAGAGAAGTGTTAAGAAGAAATCAACAACTATCCTGCCTAAATCAAGAGCCAATCAGGGCCAAGATGTTTTTAACACTCAACCTCTTAAAGTTATGGCTCATGATCTGGATGCTTCAAAAAAAGGTCTCTCTCTCACAGTGGATCTGGGAAATCTGCCAGTTTTAGATCCGAGTAAATCCTTCGAAGATCATCACAGCTCTGACAATGCAGAAGTCATAGACATTACAAACACAGAAGTGGTTCCAGAGACACCTGAATTGAAGTTGACAGATCCAGAGAAATCAAACTCCTCTCCGGAAGTCAACCATAGGAAGCAAAAACATTCTCACCGAAGAAGACATTACTATAGGAAAAAGGAAGACACTGAGAAGGACACAAATTCAGAAGCCTTCAAAAATCAACTTGTTGCCTGGCTAAAGGAAAATGGGTTGAAACTCTCAACAGACTCAGACAGCTCTGGTGCAACAACTTCTACAAACGCCTTGTTTTCTCAATTGGGTGCCAGGTTAGATTCAAAGGGGGATGGGGCTCCGGGGACATCAAATGTAATATGA
mRNA sequence
ATGCAAAAGCAGTCACTGAAGGAAGATCTTCCATTTCTAGCGACTCAAGCAACTCTTATGCCTCAAGCGATTCAAGTCATTCAAGCCCTGGTGCACTTCAACTCAAATGTTCCCGCGAACCTTCTCTGTCAAAACAAAGGGTGGACAACCGTTGGGAAATACATGGTCAGGTTCGAAAAATGGGCTCCTGCCTCCCATGCCTCTCCTAAACTCATTCCTAGCTATGGAGGATGGACAACCTTTAGAGGAATTCCACTACATTTATGGAACATGAAGACCTTTCAACAAATCGGGAAAGCATGTGGAGGTCTGCTTAAAGTAGCCGAGGAAACAAAGACAGCAAGAAACCTGATTGAAGCAAAATTAAAAATCAGATACAACTACTCAGGTTTTTTACCAGCTTATGTGAAGATCTTTGACCAAGAAGGAAACAAATTTGTTGTTCAAGTAATCACCCACTCAGAAGGAAAATGGTTAATGGAAAGGAATGTCAGATTACATGGTACCTTCAAGAGGCAAGCTGCGGCTTCTTTCGATGAATTCAATCCCGATTCAGAGCAATTCCTGTTCGATGGTCTGGAGGCCATTTCACCGGATCTTCCGAACACCTTCTCCGGCAGCCGCAAAAGCACTTCCCCGGAGCAGCCATCTGCATTAAAATCAGTCATCATTAAACCTGCCAGAGATGCCACGTCGCCAACTACTTTAAATGAAGAGGTAGTTAATGATAACAGTTTTTTGCATGCAACGGCTATTAAATCGAAGGGAAAGATTGTACATGGGATATCAAATGATTGCTCCTTGGATAAAGGAAAGCAAAAGGTTGACATTCCGTCTCAACTAACTTCAGCATTTATTTTTGACAAGCCCAAAAGAAAAGTCTCCTTTAATTCCCCCGGTAATAAAACCACTTTTTTTAATCCGGATTCTGCCCCAGCCAATCATTCCCCTCCTTTAAGCTCCCCGGAGAAAAAACAAAGAGTCAGCAGAGAGAGAAGTGTTAAGAAGAAATCAACAACTATCCTGCCTAAATCAAGAGCCAATCAGGGCCAAGATGTTTTTAACACTCAACCTCTTAAAGTTATGGCTCATGATCTGGATGCTTCAAAAAAAGGTCTCTCTCTCACAGTGGATCTGGGAAATCTGCCAGTTTTAGATCCGAGTAAATCCTTCGAAGATCATCACAGCTCTGACAATGCAGAAGTCATAGACATTACAAACACAGAAGTGGTTCCAGAGACACCTGAATTGAAGTTGACAGATCCAGAGAAATCAAACTCCTCTCCGGAAGTCAACCATAGGAAGCAAAAACATTCTCACCGAAGAAGACATTACTATAGGAAAAAGGAAGACACTGAGAAGGACACAAATTCAGAAGCCTTCAAAAATCAACTTGTTGCCTGGCTAAAGGAAAATGGGTTGAAACTCTCAACAGACTCAGACAGCTCTGGTGCAACAACTTCTACAAACGCCTTGTTTTCTCAATTGGGTGCCAGGTTAGATTCAAAGGGGGATGGGGCTCCGGGGACATCAAATGTAATATGA
Coding sequence (CDS)
ATGCAAAAGCAGTCACTGAAGGAAGATCTTCCATTTCTAGCGACTCAAGCAACTCTTATGCCTCAAGCGATTCAAGTCATTCAAGCCCTGGTGCACTTCAACTCAAATGTTCCCGCGAACCTTCTCTGTCAAAACAAAGGGTGGACAACCGTTGGGAAATACATGGTCAGGTTCGAAAAATGGGCTCCTGCCTCCCATGCCTCTCCTAAACTCATTCCTAGCTATGGAGGATGGACAACCTTTAGAGGAATTCCACTACATTTATGGAACATGAAGACCTTTCAACAAATCGGGAAAGCATGTGGAGGTCTGCTTAAAGTAGCCGAGGAAACAAAGACAGCAAGAAACCTGATTGAAGCAAAATTAAAAATCAGATACAACTACTCAGGTTTTTTACCAGCTTATGTGAAGATCTTTGACCAAGAAGGAAACAAATTTGTTGTTCAAGTAATCACCCACTCAGAAGGAAAATGGTTAATGGAAAGGAATGTCAGATTACATGGTACCTTCAAGAGGCAAGCTGCGGCTTCTTTCGATGAATTCAATCCCGATTCAGAGCAATTCCTGTTCGATGGTCTGGAGGCCATTTCACCGGATCTTCCGAACACCTTCTCCGGCAGCCGCAAAAGCACTTCCCCGGAGCAGCCATCTGCATTAAAATCAGTCATCATTAAACCTGCCAGAGATGCCACGTCGCCAACTACTTTAAATGAAGAGGTAGTTAATGATAACAGTTTTTTGCATGCAACGGCTATTAAATCGAAGGGAAAGATTGTACATGGGATATCAAATGATTGCTCCTTGGATAAAGGAAAGCAAAAGGTTGACATTCCGTCTCAACTAACTTCAGCATTTATTTTTGACAAGCCCAAAAGAAAAGTCTCCTTTAATTCCCCCGGTAATAAAACCACTTTTTTTAATCCGGATTCTGCCCCAGCCAATCATTCCCCTCCTTTAAGCTCCCCGGAGAAAAAACAAAGAGTCAGCAGAGAGAGAAGTGTTAAGAAGAAATCAACAACTATCCTGCCTAAATCAAGAGCCAATCAGGGCCAAGATGTTTTTAACACTCAACCTCTTAAAGTTATGGCTCATGATCTGGATGCTTCAAAAAAAGGTCTCTCTCTCACAGTGGATCTGGGAAATCTGCCAGTTTTAGATCCGAGTAAATCCTTCGAAGATCATCACAGCTCTGACAATGCAGAAGTCATAGACATTACAAACACAGAAGTGGTTCCAGAGACACCTGAATTGAAGTTGACAGATCCAGAGAAATCAAACTCCTCTCCGGAAGTCAACCATAGGAAGCAAAAACATTCTCACCGAAGAAGACATTACTATAGGAAAAAGGAAGACACTGAGAAGGACACAAATTCAGAAGCCTTCAAAAATCAACTTGTTGCCTGGCTAAAGGAAAATGGGTTGAAACTCTCAACAGACTCAGACAGCTCTGGTGCAACAACTTCTACAAACGCCTTGTTTTCTCAATTGGGTGCCAGGTTAGATTCAAAGGGGGATGGGGCTCCGGGGACATCAAATGTAATATGA
Protein sequence
MQKQSLKEDLPFLATQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLEAISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI
Homology
BLAST of IVF0010935 vs. ExPASy TrEMBL
Match:
A0A5A7SVM5 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00850 PE=4 SV=1)
HSP 1 Score: 938.3 bits (2424), Expect = 1.3e-269
Identity = 482/515 (93.59%), Postives = 485/515 (94.17%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A +ALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS
Sbjct: 231 TEESFTYNAFHAEKALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 290
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 291 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 350
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE
Sbjct: 351 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 410
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEV-------------- 254
AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEV
Sbjct: 411 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVGVQRGADRREAGRM 470
Query: 255 -VNDNSFLHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP 314
LHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP
Sbjct: 471 REGHMDALHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP 530
Query: 315 GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL 374
GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL
Sbjct: 531 GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL 590
Query: 375 KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL 434
KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL
Sbjct: 591 KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL 650
Query: 435 TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD 494
TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD
Sbjct: 651 TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD 710
Query: 495 SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 515
SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI
Sbjct: 711 SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 745
BLAST of IVF0010935 vs. ExPASy TrEMBL
Match:
A0A5A7U9E5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00670 PE=4 SV=1)
HSP 1 Score: 921.4 bits (2380), Expect = 1.7e-264
Identity = 477/529 (90.17%), Postives = 486/529 (91.87%), Query Frame = 0
Query: 1 MQKQSLKEDLPFLATQATLMPQAIQVIQ-------------------------------A 60
MQKQSLKEDLPFLATQ TLMPQAIQ IQ A
Sbjct: 97 MQKQSLKEDLPFLATQVTLMPQAIQAIQVIQVILQQKILQNLRKQTEESFTYNAFHAEKA 156
Query: 61 LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLW 120
LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKW PASHASPKLIPSYGGWTTFRGIPLHLW
Sbjct: 157 LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWDPASHASPKLIPSYGGWTTFRGIPLHLW 216
Query: 121 NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ 180
NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ
Sbjct: 217 NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ 276
Query: 181 VITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLEAISPDLPNTFSGSRK 240
ITHSEGKWLMERNVRLHGTFKRQ AASFDEFNPDSEQFLFDGLEAISPDLP TFSGSRK
Sbjct: 277 AITHSEGKWLMERNVRLHGTFKRQDAASFDEFNPDSEQFLFDGLEAISPDLPITFSGSRK 336
Query: 241 STSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKSKGKIVHGISNDCSLD 300
S SPEQPSALKSVIIKPARDATSPTTLNEEVVNDNS +HATAIKSKGKI++ ISNDCSLD
Sbjct: 337 SISPEQPSALKSVIIKPARDATSPTTLNEEVVNDNS-MHATAIKSKGKILNRISNDCSLD 396
Query: 301 KGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS 360
KGKQKVDIP Q+ SAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS
Sbjct: 397 KGKQKVDIPPQINSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS 456
Query: 361 RERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLSLTVDLGNLPVLDPSK 420
RERSVKKKST+ILPKSRANQGQDVFNTQPLKVMAHD+DASKKGLSLTVDLG LPV+DPSK
Sbjct: 457 RERSVKKKSTSILPKSRANQGQDVFNTQPLKVMAHDMDASKKGLSLTVDLGILPVVDPSK 516
Query: 421 SFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHRKQKHSHRRRHYYRKK 480
SFEDHHSSDNAEVIDITNTEVVPETP+LK+TDPEKSNSSPEVNHRKQKHSHRRRHYYRKK
Sbjct: 517 SFEDHHSSDNAEVIDITNTEVVPETPDLKMTDPEKSNSSPEVNHRKQKHSHRRRHYYRKK 576
Query: 481 EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA 499
EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA
Sbjct: 577 EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA 624
BLAST of IVF0010935 vs. ExPASy TrEMBL
Match:
A0A5A7UQG0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004110 PE=4 SV=1)
HSP 1 Score: 895.2 bits (2312), Expect = 1.3e-256
Identity = 467/531 (87.95%), Postives = 482/531 (90.77%), Query Frame = 0
Query: 1 MQKQSLKEDLPFLATQATLMPQAIQV-----------------IQALVHFNSNVPANLLC 60
MQ+QSLKEDLPFL TQATLMPQ IQV +ALVHFNSNVPANLLC
Sbjct: 138 MQRQSLKEDLPFLVTQATLMPQTIQVNLQETNRGIFYIPCLHAEKALVHFNSNVPANLLC 197
Query: 61 QNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMKTFQQIGKACGG 120
QNKGWTTVGKY VRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNM TFQQIGKACG
Sbjct: 198 QNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGS 257
Query: 121 LLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVITHSEGKWLMERN 180
L+KVAEETKTARN IEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQV+THSEGKWLMERN
Sbjct: 258 LVKVAEETKTARNQIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERN 317
Query: 181 VRLHGTFKRQAAASFDEFNPDSEQFLFDGLEAISPDLPNTFSGSRKSTSPEQPSALKSVI 240
VRLHGTFKRQAAASFD+FNPD+EQFLFDGLEAISPDL NT SGSRKS SPEQ SALKSVI
Sbjct: 318 VRLHGTFKRQAAASFDDFNPDAEQFLFDGLEAISPDLLNTISGSRKSISPEQQSALKSVI 377
Query: 241 IKPARDATSPTTLNEEVVNDNSFLHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTS 300
IKPARDATSPTTLNEEVVNDNS LHAT I SK KI+ GISND SLDKGKQKVDIPSQLTS
Sbjct: 378 IKPARDATSPTTLNEEVVNDNS-LHATTINSKLKILSGISNDGSLDKGKQKVDIPSQLTS 437
Query: 301 AFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILP 360
AFIFDKPKRKVSFNSP NKTTFFNPDSAPANHSP LSSPEKKQRVSRERSVKKKS TI P
Sbjct: 438 AFIFDKPKRKVSFNSPNNKTTFFNPDSAPANHSPLLSSPEKKQRVSRERSVKKKSLTIQP 497
Query: 361 KSRANQGQDVFNTQPLKVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVI 420
KSRANQG+ TQPL+V+AHDLDASKKGLSLTVDLGNLP LDPSKS EDHHSSDNAEVI
Sbjct: 498 KSRANQGKGDLITQPLQVVAHDLDASKKGLSLTVDLGNLPALDPSKSCEDHHSSDNAEVI 557
Query: 421 DITNTEVVPETPELKLTDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKN 480
DITNTEVV ETPELK+TDP+KSNSSPEVN+RKQKHSHRRRHYYRKKE EKDTNSEAFKN
Sbjct: 558 DITNTEVVTETPELKMTDPKKSNSSPEVNYRKQKHSHRRRHYYRKKEGKEKDTNSEAFKN 617
Query: 481 QLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 515
QLV WLKENGLKLSTD+DSSGATTSTNALFSQLG+RLD KGDGAPGTSNVI
Sbjct: 618 QLVTWLKENGLKLSTDTDSSGATTSTNALFSQLGSRLDPKGDGAPGTSNVI 667
BLAST of IVF0010935 vs. ExPASy TrEMBL
Match:
A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)
HSP 1 Score: 831.2 bits (2146), Expect = 2.3e-237
Identity = 430/484 (88.84%), Postives = 447/484 (92.36%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A + LVHFNSNVPANLLCQNKGWTTVGKY VRFEKWAPASHASPKLIPS
Sbjct: 228 TEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPS 287
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNM TFQQIGKACGGL+KVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 288 YGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPA 347
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQV+THSEGKWLMERNVRLHGTFKRQAAASFD+FNPDSEQFLFDGLE
Sbjct: 348 YVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLE 407
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKS 254
AISPDL NT SGSRKS SPEQPSALKSVIIKPA+ ATSPTTLNEEVVNDNS LHATA KS
Sbjct: 408 AISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS-LHATANKS 467
Query: 255 KGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPAN 314
K KI+ GISND SLDKGKQKVDIPSQLTSAFIF KPKRKVSFNSP NKTTFFNPDSAPAN
Sbjct: 468 KLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPAN 527
Query: 315 HSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLS 374
H SPEKK+RVSRERSVKKKS+TI PK RANQG+ TQPL+V+AHDLDASKKGLS
Sbjct: 528 H-----SPEKKKRVSRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLS 587
Query: 375 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHR 434
LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELK+TDPEKSNSSPEVN+R
Sbjct: 588 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYR 647
Query: 435 KQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFS 494
KQKHSHRRRHYYRKKED EKDTNSEAFKNQLV WLKENGLKLS D+DSSGATTSTNALFS
Sbjct: 648 KQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFS 705
Query: 495 QLGA 499
QLG+
Sbjct: 708 QLGS 705
BLAST of IVF0010935 vs. ExPASy TrEMBL
Match:
A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)
HSP 1 Score: 831.2 bits (2146), Expect = 2.3e-237
Identity = 430/484 (88.84%), Postives = 447/484 (92.36%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A + LVHFNSNVPANLLCQNKGWTTVGKY VRFEKWAPASHASPKLIPS
Sbjct: 228 TEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPS 287
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNM TFQQIGKACGGL+KVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 288 YGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPA 347
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQV+THSEGKWLMERNVRLHGTFKRQAAASFD+FNPDSEQFLFDGLE
Sbjct: 348 YVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLE 407
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKS 254
AISPDL NT SGSRKS SPEQPSALKSVIIKPA+ ATSPTTLNEEVVNDNS LHATA KS
Sbjct: 408 AISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS-LHATANKS 467
Query: 255 KGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPAN 314
K KI+ GISND SLDKGKQKVDIPSQLTSAFIF KPKRKVSFNSP NKTTFFNPDSAPAN
Sbjct: 468 KLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPAN 527
Query: 315 HSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLS 374
H SPEKK+RVSRERSVKKKS+TI PK RANQG+ TQPL+V+AHDLDASKKGLS
Sbjct: 528 H-----SPEKKKRVSRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLS 587
Query: 375 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHR 434
LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELK+TDPEKSNSSPEVN+R
Sbjct: 588 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYR 647
Query: 435 KQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFS 494
KQKHSHRRRHYYRKKED EKDTNSEAFKNQLV WLKENGLKLS D+DSSGATTSTNALFS
Sbjct: 648 KQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFS 705
Query: 495 QLGA 499
QLG+
Sbjct: 708 QLGS 705
BLAST of IVF0010935 vs. NCBI nr
Match:
KAA0034016.1 (hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa])
HSP 1 Score: 935 bits (2416), Expect = 0.0
Identity = 482/515 (93.59%), Postives = 485/515 (94.17%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A +ALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS
Sbjct: 231 TEESFTYNAFHAEKALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 290
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 291 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 350
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE
Sbjct: 351 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 410
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEV-------------- 254
AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEV
Sbjct: 411 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVGVQRGADRREAGRM 470
Query: 255 -VNDNSFLHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP 314
LHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP
Sbjct: 471 REGHMDALHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSP 530
Query: 315 GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL 374
GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL
Sbjct: 531 GNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPL 590
Query: 375 KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL 434
KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL
Sbjct: 591 KVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKL 650
Query: 435 TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD 494
TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD
Sbjct: 651 TDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTD 710
Query: 495 SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 514
SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI
Sbjct: 711 SDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 745
BLAST of IVF0010935 vs. NCBI nr
Match:
KAA0050816.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK08529.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 917 bits (2370), Expect = 0.0
Identity = 477/529 (90.17%), Postives = 486/529 (91.87%), Query Frame = 0
Query: 1 MQKQSLKEDLPFLATQATLMPQAIQVIQ-------------------------------A 60
MQKQSLKEDLPFLATQ TLMPQAIQ IQ A
Sbjct: 97 MQKQSLKEDLPFLATQVTLMPQAIQAIQVIQVILQQKILQNLRKQTEESFTYNAFHAEKA 156
Query: 61 LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLW 120
LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKW PASHASPKLIPSYGGWTTFRGIPLHLW
Sbjct: 157 LVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWDPASHASPKLIPSYGGWTTFRGIPLHLW 216
Query: 121 NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ 180
NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ
Sbjct: 217 NMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQ 276
Query: 181 VITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLEAISPDLPNTFSGSRK 240
ITHSEGKWLMERNVRLHGTFKRQ AASFDEFNPDSEQFLFDGLEAISPDLP TFSGSRK
Sbjct: 277 AITHSEGKWLMERNVRLHGTFKRQDAASFDEFNPDSEQFLFDGLEAISPDLPITFSGSRK 336
Query: 241 STSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKSKGKIVHGISNDCSLD 300
S SPEQPSALKSVIIKPARDATSPTTLNEEVVNDNS +HATAIKSKGKI++ ISNDCSLD
Sbjct: 337 SISPEQPSALKSVIIKPARDATSPTTLNEEVVNDNS-MHATAIKSKGKILNRISNDCSLD 396
Query: 301 KGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS 360
KGKQKVDIP Q+ SAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS
Sbjct: 397 KGKQKVDIPPQINSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVS 456
Query: 361 RERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLSLTVDLGNLPVLDPSK 420
RERSVKKKST+ILPKSRANQGQDVFNTQPLKVMAHD+DASKKGLSLTVDLG LPV+DPSK
Sbjct: 457 RERSVKKKSTSILPKSRANQGQDVFNTQPLKVMAHDMDASKKGLSLTVDLGILPVVDPSK 516
Query: 421 SFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHRKQKHSHRRRHYYRKK 480
SFEDHHSSDNAEVIDITNTEVVPETP+LK+TDPEKSNSSPEVNHRKQKHSHRRRHYYRKK
Sbjct: 517 SFEDHHSSDNAEVIDITNTEVVPETPDLKMTDPEKSNSSPEVNHRKQKHSHRRRHYYRKK 576
Query: 481 EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA 498
EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA
Sbjct: 577 EDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGA 624
BLAST of IVF0010935 vs. NCBI nr
Match:
KAA0058103.1 (hypothetical protein E6C27_scaffold274G004110 [Cucumis melo var. makuwa])
HSP 1 Score: 890 bits (2301), Expect = 0.0
Identity = 467/531 (87.95%), Postives = 482/531 (90.77%), Query Frame = 0
Query: 1 MQKQSLKEDLPFLATQATLMPQAIQVI-----------------QALVHFNSNVPANLLC 60
MQ+QSLKEDLPFL TQATLMPQ IQV +ALVHFNSNVPANLLC
Sbjct: 138 MQRQSLKEDLPFLVTQATLMPQTIQVNLQETNRGIFYIPCLHAEKALVHFNSNVPANLLC 197
Query: 61 QNKGWTTVGKYMVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMKTFQQIGKACGG 120
QNKGWTTVGKY VRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNM TFQQIGKACG
Sbjct: 198 QNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGS 257
Query: 121 LLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVITHSEGKWLMERN 180
L+KVAEETKTARN IEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQV+THSEGKWLMERN
Sbjct: 258 LVKVAEETKTARNQIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERN 317
Query: 181 VRLHGTFKRQAAASFDEFNPDSEQFLFDGLEAISPDLPNTFSGSRKSTSPEQPSALKSVI 240
VRLHGTFKRQAAASFD+FNPD+EQFLFDGLEAISPDL NT SGSRKS SPEQ SALKSVI
Sbjct: 318 VRLHGTFKRQAAASFDDFNPDAEQFLFDGLEAISPDLLNTISGSRKSISPEQQSALKSVI 377
Query: 241 IKPARDATSPTTLNEEVVNDNSFLHATAIKSKGKIVHGISNDCSLDKGKQKVDIPSQLTS 300
IKPARDATSPTTLNEEVVNDNS LHAT I SK KI+ GISND SLDKGKQKVDIPSQLTS
Sbjct: 378 IKPARDATSPTTLNEEVVNDNS-LHATTINSKLKILSGISNDGSLDKGKQKVDIPSQLTS 437
Query: 301 AFIFDKPKRKVSFNSPGNKTTFFNPDSAPANHSPPLSSPEKKQRVSRERSVKKKSTTILP 360
AFIFDKPKRKVSFNSP NKTTFFNPDSAPANHSP LSSPEKKQRVSRERSVKKKS TI P
Sbjct: 438 AFIFDKPKRKVSFNSPNNKTTFFNPDSAPANHSPLLSSPEKKQRVSRERSVKKKSLTIQP 497
Query: 361 KSRANQGQDVFNTQPLKVMAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVI 420
KSRANQG+ TQPL+V+AHDLDASKKGLSLTVDLGNLP LDPSKS EDHHSSDNAEVI
Sbjct: 498 KSRANQGKGDLITQPLQVVAHDLDASKKGLSLTVDLGNLPALDPSKSCEDHHSSDNAEVI 557
Query: 421 DITNTEVVPETPELKLTDPEKSNSSPEVNHRKQKHSHRRRHYYRKKEDTEKDTNSEAFKN 480
DITNTEVV ETPELK+TDP+KSNSSPEVN+RKQKHSHRRRHYYRKKE EKDTNSEAFKN
Sbjct: 558 DITNTEVVTETPELKMTDPKKSNSSPEVNYRKQKHSHRRRHYYRKKEGKEKDTNSEAFKN 617
Query: 481 QLVAWLKENGLKLSTDSDSSGATTSTNALFSQLGARLDSKGDGAPGTSNVI 514
QLV WLKENGLKLSTD+DSSGATTSTNALFSQLG+RLD KGDGAPGTSNVI
Sbjct: 618 QLVTWLKENGLKLSTDTDSSGATTSTNALFSQLGSRLDPKGDGAPGTSNVI 667
BLAST of IVF0010935 vs. NCBI nr
Match:
KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 828 bits (2139), Expect = 8.73e-287
Identity = 430/484 (88.84%), Postives = 447/484 (92.36%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A + LVHFNSNVPANLLCQNKGWTTVGKY VRFEKWAPASHASPKLIPS
Sbjct: 228 TEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPS 287
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNM TFQQIGKACGGL+KVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 288 YGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPA 347
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQV+THSEGKWLMERNVRLHGTFKRQAAASFD+FNPDSEQFLFDGLE
Sbjct: 348 YVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLE 407
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKS 254
AISPDL NT SGSRKS SPEQPSALKSVIIKPA+ ATSPTTLNEEVVNDNS LHATA KS
Sbjct: 408 AISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS-LHATANKS 467
Query: 255 KGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPAN 314
K KI+ GISND SLDKGKQKVDIPSQLTSAFIF KPKRKVSFNSP NKTTFFNPDSAPAN
Sbjct: 468 KLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPAN 527
Query: 315 HSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLS 374
HSP EKK+RVSRERSVKKKS+TI PK RANQG+ TQPL+V+AHDLDASKKGLS
Sbjct: 528 HSP-----EKKKRVSRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLS 587
Query: 375 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHR 434
LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELK+TDPEKSNSSPEVN+R
Sbjct: 588 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYR 647
Query: 435 KQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFS 494
KQKHSHRRRHYYRKKED EKDTNSEAFKNQLV WLKENGLKLS D+DSSGATTSTNALFS
Sbjct: 648 KQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFS 705
Query: 495 QLGA 498
QLG+
Sbjct: 708 QLGS 705
BLAST of IVF0010935 vs. NCBI nr
Match:
TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 828 bits (2139), Expect = 4.44e-282
Identity = 430/484 (88.84%), Postives = 447/484 (92.36%), Query Frame = 0
Query: 15 TQATLMPQAIQVIQALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWAPASHASPKLIPS 74
T+ + A + LVHFNSNVPANLLCQNKGWTTVGKY VRFEKWAPASHASPKLIPS
Sbjct: 228 TEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPS 287
Query: 75 YGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPA 134
YGGWTTFRGIPLHLWNM TFQQIGKACGGL+KVAEETKTARNLIEAKLKIRYNYSGFLPA
Sbjct: 288 YGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPA 347
Query: 135 YVKIFDQEGNKFVVQVITHSEGKWLMERNVRLHGTFKRQAAASFDEFNPDSEQFLFDGLE 194
YVKIFDQEGNKFVVQV+THSEGKWLMERNVRLHGTFKRQAAASFD+FNPDSEQFLFDGLE
Sbjct: 348 YVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLE 407
Query: 195 AISPDLPNTFSGSRKSTSPEQPSALKSVIIKPARDATSPTTLNEEVVNDNSFLHATAIKS 254
AISPDL NT SGSRKS SPEQPSALKSVIIKPA+ ATSPTTLNEEVVNDNS LHATA KS
Sbjct: 408 AISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS-LHATANKS 467
Query: 255 KGKIVHGISNDCSLDKGKQKVDIPSQLTSAFIFDKPKRKVSFNSPGNKTTFFNPDSAPAN 314
K KI+ GISND SLDKGKQKVDIPSQLTSAFIF KPKRKVSFNSP NKTTFFNPDSAPAN
Sbjct: 468 KLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPAN 527
Query: 315 HSPPLSSPEKKQRVSRERSVKKKSTTILPKSRANQGQDVFNTQPLKVMAHDLDASKKGLS 374
HSP EKK+RVSRERSVKKKS+TI PK RANQG+ TQPL+V+AHDLDASKKGLS
Sbjct: 528 HSP-----EKKKRVSRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLS 587
Query: 375 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKLTDPEKSNSSPEVNHR 434
LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELK+TDPEKSNSSPEVN+R
Sbjct: 588 LTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYR 647
Query: 435 KQKHSHRRRHYYRKKEDTEKDTNSEAFKNQLVAWLKENGLKLSTDSDSSGATTSTNALFS 494
KQKHSHRRRHYYRKKED EKDTNSEAFKNQLV WLKENGLKLS D+DSSGATTSTNALFS
Sbjct: 648 KQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFS 705
Query: 495 QLGA 498
QLG+
Sbjct: 708 QLGS 705
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SVM5 | 1.3e-269 | 93.59 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7U9E5 | 1.7e-264 | 90.17 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7UQG0 | 1.3e-256 | 87.95 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7TDG1 | 2.3e-237 | 88.84 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BL61 | 2.3e-237 | 88.84 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
KAA0034016.1 | 0.0 | 93.59 | hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa] | [more] |
KAA0050816.1 | 0.0 | 90.17 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK085... | [more] |
KAA0058103.1 | 0.0 | 87.95 | hypothetical protein E6C27_scaffold274G004110 [Cucumis melo var. makuwa] | [more] |
KAA0039309.1 | 8.73e-287 | 88.84 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYK00493.1 | 4.44e-282 | 88.84 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |